RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 TMEM63BQ5T3F8 832 aa25.34■■□□□ 1.65
PPFIA3-208ENST00000602726 RAB11FIP4Q86YS3 637 aa25.34■■□□□ 1.65
PPFIA3-208ENST00000602726 SAMD3Q8N6K7 520 aa25.34■■□□□ 1.65
PPFIA3-208ENST00000602726 VTI1AQ96AJ9 217 aa25.34■■□□□ 1.65
PPFIA3-208ENST00000602726 TCEANC2Q96MN5 208 aa25.34■■□□□ 1.65
PPFIA3-208ENST00000602726 IWS1Q96ST2 819 aa25.34■■□□□ 1.65
PPFIA3-208ENST00000602726 GDF15Q99988 308 aa25.34■■□□□ 1.65
PPFIA3-208ENST00000602726 SEC63Q9UGP8 760 aaKnown RBP25.34■■□□□ 1.65
PPFIA3-208ENST00000602726 ZEB2O60315 1214 aa25.33■■□□□ 1.65
PPFIA3-208ENST00000602726 PLEKHA8P1O95397 391 aa25.33■■□□□ 1.65
PPFIA3-208ENST00000602726 PTGS1P23219 599 aa25.33■■□□□ 1.65
PPFIA3-208ENST00000602726 GHRHRQ02643 423 aa25.33■■□□□ 1.65
PPFIA3-208ENST00000602726 TLE2Q04725 743 aa25.33■■□□□ 1.65
PPFIA3-208ENST00000602726 MICU3Q86XE3 530 aa25.33■■□□□ 1.65
PPFIA3-208ENST00000602726 FANCBQ8NB91 859 aa25.33■■□□□ 1.65
PPFIA3-208ENST00000602726 SCFD2Q8WU76 684 aa25.33■■□□□ 1.65
PPFIA3-208ENST00000602726 KCNB2Q92953 911 aa25.33■■□□□ 1.65
PPFIA3-208ENST00000602726 ELP1O95163 1332 aa25.33■■□□□ 1.64
PPFIA3-208ENST00000602726 GCOM1H8Y6P7 765 aaPredicted RBP25.32■■□□□ 1.64
PPFIA3-208ENST00000602726 POLR2MP0CAP2 368 aa25.32■■□□□ 1.64
PPFIA3-208ENST00000602726 EIF2AK2P19525 551 aaKnown RBP25.32■■□□□ 1.64
PPFIA3-208ENST00000602726 PPP2R5BQ15173 497 aa25.32■■□□□ 1.64
PPFIA3-208ENST00000602726 STXBP2Q15833 593 aa25.32■■□□□ 1.64
PPFIA3-208ENST00000602726 SRBD1Q8N5C6 995 aaKnown RBP25.32■■□□□ 1.64
PPFIA3-208ENST00000602726 PRDM5Q9NQX1 630 aaPredicted RBP25.32■■□□□ 1.64
PPFIA3-208ENST00000602726 PQBP1O60828 265 aaKnown RBP25.31■■□□□ 1.64
PPFIA3-208ENST00000602726 HOXA13P31271 388 aaPredicted RBP25.31■■□□□ 1.64
PPFIA3-208ENST00000602726 FGD1P98174 961 aa25.31■■□□□ 1.64
PPFIA3-208ENST00000602726 CMTR1Q8N1G2 835 aaKnown RBP25.31■■□□□ 1.64
PPFIA3-208ENST00000602726 JAKMIP1Q96N16 626 aaKnown RBP25.31■■□□□ 1.64
PPFIA3-208ENST00000602726 LBHD1Q9BQE6 289 aaPredicted RBP25.31■■□□□ 1.64
PPFIA3-208ENST00000602726 PXMP2Q9NR77 195 aa25.31■■□□□ 1.64
PPFIA3-208ENST00000602726 SNX14Q9Y5W7 946 aa25.31■■□□□ 1.64
PPFIA3-208ENST00000602726 NKRFO15226 690 aaKnown RBP eCLIP25.3■■□□□ 1.64
PPFIA3-208ENST00000602726 BMP8BP34820 402 aa25.3■■□□□ 1.64
PPFIA3-208ENST00000602726 MDM2Q00987 491 aaPredicted RBP25.3■■□□□ 1.64
PPFIA3-208ENST00000602726 APOA5Q6Q788 366 aa25.3■■□□□ 1.64
PPFIA3-208ENST00000602726 PCDH10Q9P2E7 1040 aa25.3■■□□□ 1.64
PPFIA3-208ENST00000602726 A0A0U1RQG5 324 aaPredicted RBP25.29■■□□□ 1.64
PPFIA3-208ENST00000602726 A0A1W2PPC1 479 aa25.29■■□□□ 1.64
PPFIA3-208ENST00000602726 CABYRO75952 493 aa25.29■■□□□ 1.64
PPFIA3-208ENST00000602726 NR3C2P08235 984 aa25.29■■□□□ 1.64
PPFIA3-208ENST00000602726 TXNP10599 105 aaKnown RBP25.29■■□□□ 1.64
PPFIA3-208ENST00000602726 TTLL4Q14679 1199 aa25.29■■□□□ 1.64
PPFIA3-208ENST00000602726 CXCL17Q6UXB2 119 aa25.29■■□□□ 1.64
PPFIA3-208ENST00000602726 TMTC3Q6ZXV5 915 aa25.29■■□□□ 1.64
PPFIA3-208ENST00000602726 CCDC82Q8N4S0 544 aa25.29■■□□□ 1.64
PPFIA3-208ENST00000602726 OR6J1Q8NGC5 347 aa25.29■■□□□ 1.64
PPFIA3-208ENST00000602726 UBE2OQ9C0C9 1292 aaKnown RBP25.29■■□□□ 1.64
PPFIA3-208ENST00000602726 PDLIM7Q9NR12 457 aa25.29■■□□□ 1.64
PPFIA3-208ENST00000602726 BRPF3Q9ULD4 1205 aa25.29■■□□□ 1.64
PPFIA3-208ENST00000602726 DCDC2CA8MYV0 355 aa25.28■■□□□ 1.64
PPFIA3-208ENST00000602726 ZBTB43O43298 467 aa25.28■■□□□ 1.64
PPFIA3-208ENST00000602726 EIF3JO75822 258 aaKnown RBP25.28■■□□□ 1.64
PPFIA3-208ENST00000602726 CLTBP09497 229 aa25.28■■□□□ 1.64
PPFIA3-208ENST00000602726 CPA1P15085 419 aa25.28■■□□□ 1.64
PPFIA3-208ENST00000602726 BLOC1S2Q6QNY1 142 aa25.28■■□□□ 1.64
PPFIA3-208ENST00000602726 SEPT14Q6ZU15 432 aa25.28■■□□□ 1.64
PPFIA3-208ENST00000602726 ANKRD33Q7Z3H0 272 aa25.28■■□□□ 1.64
PPFIA3-208ENST00000602726 FCHSD1Q86WN1 690 aa25.28■■□□□ 1.64
PPFIA3-208ENST00000602726 TOX2Q96NM4 488 aa25.28■■□□□ 1.64
PPFIA3-208ENST00000602726 RBM28Q9NW13 759 aaKnown RBP25.28■■□□□ 1.64
PPFIA3-208ENST00000602726 EPB41L2O43491 1005 aaKnown RBP25.27■■□□□ 1.64
PPFIA3-208ENST00000602726 CPT1AP50416 773 aa25.27■■□□□ 1.64
PPFIA3-208ENST00000602726 BRDTQ58F21 947 aaPredicted RBP25.27■■□□□ 1.64
PPFIA3-208ENST00000602726 MROH7Q68CQ1 1323 aa25.27■■□□□ 1.64
PPFIA3-208ENST00000602726 KLF18A0A0U1RQI7 1052 aa25.26■■□□□ 1.63
PPFIA3-208ENST00000602726 ARVCFO00192 962 aa25.26■■□□□ 1.63
PPFIA3-208ENST00000602726 MYCLP12524 364 aaPredicted RBP25.26■■□□□ 1.63
PPFIA3-208ENST00000602726 PSMA5P28066 241 aa25.26■■□□□ 1.63
PPFIA3-208ENST00000602726 RTN1Q16799 776 aa25.26■■□□□ 1.63
PPFIA3-208ENST00000602726 SH3RF1Q7Z6J0 888 aa25.26■■□□□ 1.63
PPFIA3-208ENST00000602726 COPS5Q92905 334 aa25.26■■□□□ 1.63
PPFIA3-208ENST00000602726 PDCD2LQ9BRP1 358 aa25.26■■□□□ 1.63
PPFIA3-208ENST00000602726 NAP1L2Q9ULW6 460 aaPredicted RBP25.26■■□□□ 1.63
PPFIA3-208ENST00000602726 TRIM43BA6NCK2 446 aa25.25■■□□□ 1.63
PPFIA3-208ENST00000602726 ARIH2O95376 493 aa25.25■■□□□ 1.63
PPFIA3-208ENST00000602726 CDK7P50613 346 aa25.25■■□□□ 1.63
PPFIA3-208ENST00000602726 FXR1P51114 621 aaKnown RBP eCLIP25.25■■□□□ 1.63
PPFIA3-208ENST00000602726 CCDC62Q6P9F0 684 aa25.25■■□□□ 1.63
PPFIA3-208ENST00000602726 Q6ZUG5 572 aa25.25■■□□□ 1.63
PPFIA3-208ENST00000602726 CUL5Q93034 780 aa25.25■■□□□ 1.63
PPFIA3-208ENST00000602726 TRIM43Q96BQ3 446 aaPredicted RBP25.25■■□□□ 1.63
PPFIA3-208ENST00000602726 TMEM39AQ9NV64 488 aa25.25■■□□□ 1.63
PPFIA3-208ENST00000602726 POLR3EQ9NVU0 708 aa25.25■■□□□ 1.63
PPFIA3-208ENST00000602726 hCG_1642624A0A1W2PR95 340 aa25.24■■□□□ 1.63
PPFIA3-208ENST00000602726 GOLGA8AA7E2F4 631 aa25.24■■□□□ 1.63
PPFIA3-208ENST00000602726 GOLGA8BA8MQT2 603 aa25.24■■□□□ 1.63
PPFIA3-208ENST00000602726 PGM5Q15124 567 aa25.24■■□□□ 1.63
PPFIA3-208ENST00000602726 VSIG10LQ86VR7 867 aa25.24■■□□□ 1.63
PPFIA3-208ENST00000602726 MYL3P08590 195 aa25.23■■□□□ 1.63
PPFIA3-208ENST00000602726 CASTP20810 708 aaKnown RBP25.23■■□□□ 1.63
PPFIA3-208ENST00000602726 RPS6KB1P23443 525 aa25.23■■□□□ 1.63
PPFIA3-208ENST00000602726 FAAP100Q0VG06 881 aa25.23■■□□□ 1.63
PPFIA3-208ENST00000602726 ITGA7Q13683 1181 aa25.23■■□□□ 1.63
PPFIA3-208ENST00000602726 LY6KQ17RY6 165 aa25.23■■□□□ 1.63
PPFIA3-208ENST00000602726 SMARCC2Q8TAQ2 1214 aa25.23■■□□□ 1.63
PPFIA3-208ENST00000602726 USP26Q9BXU7 913 aa25.23■■□□□ 1.63
PPFIA3-208ENST00000602726 MRVI1Q9Y6F6 885 aa25.23■■□□□ 1.63
PPFIA3-208ENST00000602726 KIAA1217Q5T5P2 1943 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms