RNA–Protein interactions for RNA: ENST00000602619.1

SGMS1-207, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-207ENST00000602619 TNFRSF12AQ9NP84 129 aa4.43□□□□□ -1.7
SGMS1-207ENST00000602619 SIRPGQ9P1W8 387 aa4.43□□□□□ -1.7
SGMS1-207ENST00000602619 GPR55Q9Y2T6 319 aaPredicted RBP4.43□□□□□ -1.7
SGMS1-207ENST00000602619 SH3D21A4FU49 640 aa4.42□□□□□ -1.7
SGMS1-207ENST00000602619 SUSD5O60279 629 aa4.42□□□□□ -1.7
SGMS1-207ENST00000602619 MSL3P1P0C860 447 aa4.42□□□□□ -1.7
SGMS1-207ENST00000602619 PFKLP17858 780 aa4.42□□□□□ -1.7
SGMS1-207ENST00000602619 GTF2F1P35269 517 aaKnown RBP eCLIP4.42□□□□□ -1.7
SGMS1-207ENST00000602619 CEBPAP49715 358 aaPredicted RBP4.42□□□□□ -1.7
SGMS1-207ENST00000602619 RASGRF1Q13972 1273 aa4.42□□□□□ -1.7
SGMS1-207ENST00000602619 SLC10A6Q3KNW5 377 aa4.42□□□□□ -1.7
SGMS1-207ENST00000602619 PLEKHN1Q494U1 663 aaPredicted RBP4.42□□□□□ -1.7
SGMS1-207ENST00000602619 LARP1BQ659C4 914 aaKnown RBP4.42□□□□□ -1.7
SGMS1-207ENST00000602619 SAPCD2Q86UD0 394 aa4.42□□□□□ -1.7
SGMS1-207ENST00000602619 Q8N1X5 172 aa4.42□□□□□ -1.7
SGMS1-207ENST00000602619 FIBCD1Q8N539 461 aa4.42□□□□□ -1.7
SGMS1-207ENST00000602619 MRGPRX3Q96LB0 322 aa4.42□□□□□ -1.7
SGMS1-207ENST00000602619 APEX2Q9UBZ4 518 aa4.42□□□□□ -1.7
SGMS1-207ENST00000602619 CGGBP1Q9UFW8 167 aaPredicted RBP4.42□□□□□ -1.7
SGMS1-207ENST00000602619 ACSL6Q9UKU0 697 aa4.42□□□□□ -1.7
SGMS1-207ENST00000602619 DIS3Q9Y2L1 958 aaKnown RBP4.42□□□□□ -1.7
SGMS1-207ENST00000602619 SF3B6Q9Y3B4 125 aaKnown RBP4.42□□□□□ -1.7
SGMS1-207ENST00000602619 TAF6LQ9Y6J9 622 aa4.42□□□□□ -1.7
SGMS1-207ENST00000602619 PPM1BO75688 479 aa4.41□□□□□ -1.7
SGMS1-207ENST00000602619 C6P13671 934 aa4.41□□□□□ -1.7
SGMS1-207ENST00000602619 ATF2P15336 505 aa4.41□□□□□ -1.7
SGMS1-207ENST00000602619 VAV1P15498 845 aa4.41□□□□□ -1.7
SGMS1-207ENST00000602619 MAPKAPK2P49137 400 aa4.41□□□□□ -1.7
SGMS1-207ENST00000602619 HTRA3P83110 453 aa4.41□□□□□ -1.7
SGMS1-207ENST00000602619 DLX2Q07687 328 aaPredicted RBP4.41□□□□□ -1.7
SGMS1-207ENST00000602619 RTP2Q5QGT7 225 aa4.41□□□□□ -1.7
SGMS1-207ENST00000602619 ZC3H14Q6PJT7 736 aaKnown RBP4.41□□□□□ -1.7
SGMS1-207ENST00000602619 EEPD1Q7L9B9 569 aa4.41□□□□□ -1.7
SGMS1-207ENST00000602619 SLCO6A1Q86UG4 719 aa4.41□□□□□ -1.7
SGMS1-207ENST00000602619 ZFPM1Q8IX07 1006 aa4.41□□□□□ -1.7
SGMS1-207ENST00000602619 FCRL2Q96LA5 508 aaPredicted RBP4.41□□□□□ -1.7
SGMS1-207ENST00000602619 C8orf49Q96NF6 230 aa4.41□□□□□ -1.7
SGMS1-207ENST00000602619 SLC12A9Q9BXP2 914 aa4.41□□□□□ -1.7
SGMS1-207ENST00000602619 LNPKQ9C0E8 428 aa4.41□□□□□ -1.7
SGMS1-207ENST00000602619 SLITRK6Q9H5Y7 841 aa4.41□□□□□ -1.7
SGMS1-207ENST00000602619 FBXL21Q9UKT6 434 aa4.41□□□□□ -1.7
SGMS1-207ENST00000602619 PLA2G2DQ9UNK4 145 aa4.41□□□□□ -1.7
SGMS1-207ENST00000602619 MINPP1Q9UNW1 487 aa4.41□□□□□ -1.7
SGMS1-207ENST00000602619 EMC9Q9Y3B6 208 aa4.41□□□□□ -1.7
SGMS1-207ENST00000602619 R3HCC1Q9Y3T6 440 aaKnown RBP4.41□□□□□ -1.7
SGMS1-207ENST00000602619 H0Y8X5 98 aa4.4□□□□□ -1.71
SGMS1-207ENST00000602619 DDAH1O94760 285 aa4.4□□□□□ -1.71
SGMS1-207ENST00000602619 ACVRL1P37023 503 aa4.4□□□□□ -1.71
SGMS1-207ENST00000602619 GDF5P43026 501 aa4.4□□□□□ -1.71
SGMS1-207ENST00000602619 RCSD1Q6JBY9 416 aa4.4□□□□□ -1.71
SGMS1-207ENST00000602619 CRTC3Q6UUV7 619 aa4.4□□□□□ -1.71
SGMS1-207ENST00000602619 TRIM59Q8IWR1 403 aa4.4□□□□□ -1.71
SGMS1-207ENST00000602619 CRACR2BQ8N4Y2 399 aaPredicted RBP4.4□□□□□ -1.71
SGMS1-207ENST00000602619 JMYQ8N9B5 988 aa4.4□□□□□ -1.71
SGMS1-207ENST00000602619 BVESQ8NE79 360 aa4.4□□□□□ -1.71
SGMS1-207ENST00000602619 NUP43Q8NFH3 380 aa4.4□□□□□ -1.71
SGMS1-207ENST00000602619 SGSM3Q96HU1 749 aa4.4□□□□□ -1.71
SGMS1-207ENST00000602619 TRIM55Q9BYV6 548 aa4.4□□□□□ -1.71
SGMS1-207ENST00000602619 FAM86C1Q9NVL1 165 aa4.4□□□□□ -1.71
SGMS1-207ENST00000602619 HCFC2Q9Y5Z7 792 aa4.4□□□□□ -1.71
SGMS1-207ENST00000602619 A0A1W2PQ45 241 aaPredicted RBP4.39□□□□□ -1.71
SGMS1-207ENST00000602619 A0A1W2PQY0 241 aa4.39□□□□□ -1.71
SGMS1-207ENST00000602619 SCG5P05408 212 aa4.39□□□□□ -1.71
SGMS1-207ENST00000602619 TACR2P21452 398 aa4.39□□□□□ -1.71
SGMS1-207ENST00000602619 POU4F1Q01851 419 aa4.39□□□□□ -1.71
SGMS1-207ENST00000602619 TESK1Q15569 626 aa4.39□□□□□ -1.71
SGMS1-207ENST00000602619 TARBP2Q15633 366 aaKnown RBP4.39□□□□□ -1.71
SGMS1-207ENST00000602619 NOL9Q5SY16 702 aaKnown RBP4.39□□□□□ -1.71
SGMS1-207ENST00000602619 POMZP3Q6PJE2 187 aa4.39□□□□□ -1.71
SGMS1-207ENST00000602619 ZNF227Q86WZ6 799 aa4.39□□□□□ -1.71
SGMS1-207ENST00000602619 TMEM52Q8NDY8 209 aa4.39□□□□□ -1.71
SGMS1-207ENST00000602619 COPS5Q92905 334 aa4.39□□□□□ -1.71
SGMS1-207ENST00000602619 BRF1Q92994 677 aa4.39□□□□□ -1.71
SGMS1-207ENST00000602619 LOXL4Q96JB6 756 aa4.39□□□□□ -1.71
SGMS1-207ENST00000602619 FGD4Q96M96 766 aa4.39□□□□□ -1.71
SGMS1-207ENST00000602619 SAMD11Q96NU1 681 aa4.39□□□□□ -1.71
SGMS1-207ENST00000602619 FCRL3Q96P31 734 aaPredicted RBP4.39□□□□□ -1.71
SGMS1-207ENST00000602619 APBA2Q99767 749 aa4.39□□□□□ -1.71
SGMS1-207ENST00000602619 DSCC1Q9BVC3 393 aa4.39□□□□□ -1.71
SGMS1-207ENST00000602619 NOL6Q9H6R4 1146 aaKnown RBP4.39□□□□□ -1.71
SGMS1-207ENST00000602619 ERVK13-1Q9NX77 482 aa4.39□□□□□ -1.71
SGMS1-207ENST00000602619 PMF1-BGLAPU3KQ54 211 aa4.39□□□□□ -1.71
SGMS1-207ENST00000602619 CYR61O00622 381 aa4.38□□□□□ -1.71
SGMS1-207ENST00000602619 AURKAO14965 403 aa4.38□□□□□ -1.71
SGMS1-207ENST00000602619 U2SURPO15042 1029 aaKnown RBP4.38□□□□□ -1.71
SGMS1-207ENST00000602619 FGF10O15520 208 aaPredicted RBP4.38□□□□□ -1.71
SGMS1-207ENST00000602619 PDPK1O15530 556 aa4.38□□□□□ -1.71
SGMS1-207ENST00000602619 CYP4F3Q08477 520 aa4.38□□□□□ -1.71
SGMS1-207ENST00000602619 NR1I3Q14994 352 aa4.38□□□□□ -1.71
SGMS1-207ENST00000602619 CRB2Q5IJ48 1285 aa4.38□□□□□ -1.71
SGMS1-207ENST00000602619 SPRED1Q7Z699 444 aa4.38□□□□□ -1.71
SGMS1-207ENST00000602619 CARFQ8N187 725 aa4.38□□□□□ -1.71
SGMS1-207ENST00000602619 TTC9BQ8N6N2 239 aa4.38□□□□□ -1.71
SGMS1-207ENST00000602619 ADCY4Q8NFM4 1077 aa4.38□□□□□ -1.71
SGMS1-207ENST00000602619 DNAJC2Q99543 621 aaKnown RBP4.38□□□□□ -1.71
SGMS1-207ENST00000602619 MCMBPQ9BTE3 642 aa4.38□□□□□ -1.71
SGMS1-207ENST00000602619 OSBPL2Q9H1P3 480 aa4.38□□□□□ -1.71
SGMS1-207ENST00000602619 NKX2-4Q9H2Z4 354 aa4.38□□□□□ -1.71
SGMS1-207ENST00000602619 ST7Q9NRC1 585 aa4.38□□□□□ -1.71
SGMS1-207ENST00000602619 SNTG2Q9NY99 539 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms