RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 BMP8BP34820 402 aa26.17■■□□□ 1.78
CCDC9-204ENST00000599398 NKX3-2P78367 333 aa26.17■■□□□ 1.78
CCDC9-204ENST00000599398 PPP2R5BQ15173 497 aa26.17■■□□□ 1.78
CCDC9-204ENST00000599398 SYNE3Q6ZMZ3 975 aa26.17■■□□□ 1.78
CCDC9-204ENST00000599398 DHX32Q7L7V1 743 aaKnown RBP26.17■■□□□ 1.78
CCDC9-204ENST00000599398 SCFD2Q8WU76 684 aa26.17■■□□□ 1.78
CCDC9-204ENST00000599398 RRP36Q96EU6 259 aaKnown RBP26.17■■□□□ 1.78
CCDC9-204ENST00000599398 SPZ1Q9BXG8 430 aa26.17■■□□□ 1.78
CCDC9-204ENST00000599398 UBE2OQ9C0C9 1292 aaKnown RBP26.17■■□□□ 1.78
CCDC9-204ENST00000599398 PDLIM7Q9NR12 457 aa26.17■■□□□ 1.78
CCDC9-204ENST00000599398 ELP1O95163 1332 aa26.16■■□□□ 1.78
CCDC9-204ENST00000599398 RBM47A0AV96 593 aaKnown RBP26.16■■□□□ 1.78
CCDC9-204ENST00000599398 REC8O95072 547 aa26.16■■□□□ 1.78
CCDC9-204ENST00000599398 PLEKHA8P1O95397 391 aa26.16■■□□□ 1.78
CCDC9-204ENST00000599398 HOXA13P31271 388 aaPredicted RBP26.16■■□□□ 1.78
CCDC9-204ENST00000599398 FXR1P51114 621 aaKnown RBP eCLIP26.16■■□□□ 1.78
CCDC9-204ENST00000599398 HSD17B4P51659 736 aa26.16■■□□□ 1.78
CCDC9-204ENST00000599398 MICU3Q86XE3 530 aa26.16■■□□□ 1.78
CCDC9-204ENST00000599398 IWS1Q96ST2 819 aa26.16■■□□□ 1.78
CCDC9-204ENST00000599398 SEC63Q9UGP8 760 aaKnown RBP26.16■■□□□ 1.78
CCDC9-204ENST00000599398 A0A1W2PPC1 479 aa26.15■■□□□ 1.78
CCDC9-204ENST00000599398 EXOSC10Q01780 885 aaKnown RBP26.15■■□□□ 1.78
CCDC9-204ENST00000599398 CXCL17Q6UXB2 119 aa26.15■■□□□ 1.78
CCDC9-204ENST00000599398 SH3RF1Q7Z6J0 888 aa26.15■■□□□ 1.78
CCDC9-204ENST00000599398 SGMS1Q86VZ5 419 aa26.15■■□□□ 1.78
CCDC9-204ENST00000599398 CMTR1Q8N1G2 835 aaKnown RBP26.15■■□□□ 1.78
CCDC9-204ENST00000599398 OR6J1Q8NGC5 347 aa26.15■■□□□ 1.78
CCDC9-204ENST00000599398 PXMP2Q9NR77 195 aa26.15■■□□□ 1.78
CCDC9-204ENST00000599398 MAP3K20Q9NYL2 800 aaKnown RBP26.15■■□□□ 1.78
CCDC9-204ENST00000599398 A0A0U1RQG5 324 aaPredicted RBP26.14■■□□□ 1.78
CCDC9-204ENST00000599398 DCDC2CA8MYV0 355 aa26.14■■□□□ 1.78
CCDC9-204ENST00000599398 GCOM1H8Y6P7 765 aaPredicted RBP26.14■■□□□ 1.78
CCDC9-204ENST00000599398 CLTBP09497 229 aa26.14■■□□□ 1.78
CCDC9-204ENST00000599398 POLR2MP0CAP2 368 aa26.14■■□□□ 1.78
CCDC9-204ENST00000599398 SMARCA1P28370 1054 aa26.14■■□□□ 1.78
CCDC9-204ENST00000599398 GHRHRQ02643 423 aa26.14■■□□□ 1.78
CCDC9-204ENST00000599398 TTLL4Q14679 1199 aa26.14■■□□□ 1.78
CCDC9-204ENST00000599398 STXBP2Q15833 593 aa26.14■■□□□ 1.78
CCDC9-204ENST00000599398 SEPT14Q6ZU15 432 aa26.14■■□□□ 1.78
CCDC9-204ENST00000599398 SRBD1Q8N5C6 995 aaKnown RBP26.14■■□□□ 1.78
CCDC9-204ENST00000599398 SAMD3Q8N6K7 520 aa26.14■■□□□ 1.78
CCDC9-204ENST00000599398 NKRFO15226 690 aaKnown RBP eCLIP26.13■■□□□ 1.77
CCDC9-204ENST00000599398 SLC34A2O95436 690 aa26.13■■□□□ 1.77
CCDC9-204ENST00000599398 HMGB1P09429 215 aaKnown RBP26.13■■□□□ 1.77
CCDC9-204ENST00000599398 TXNP10599 105 aaKnown RBP26.13■■□□□ 1.77
CCDC9-204ENST00000599398 HSPA4P34932 840 aa26.13■■□□□ 1.77
CCDC9-204ENST00000599398 FGD1P98174 961 aa26.13■■□□□ 1.77
CCDC9-204ENST00000599398 CCDC82Q8N4S0 544 aa26.13■■□□□ 1.77
CCDC9-204ENST00000599398 FANCBQ8NB91 859 aa26.13■■□□□ 1.77
CCDC9-204ENST00000599398 KIAA1217Q5T5P2 1943 aa26.13■■□□□ 1.77
CCDC9-204ENST00000599398 MROH7Q68CQ1 1323 aa26.13■■□□□ 1.77
CCDC9-204ENST00000599398 LTBP2Q14767 1821 aa26.12■■□□□ 1.77
CCDC9-204ENST00000599398 TRIM43BA6NCK2 446 aa26.12■■□□□ 1.77
CCDC9-204ENST00000599398 CABYRO75952 493 aa26.12■■□□□ 1.77
CCDC9-204ENST00000599398 NR3C2P08235 984 aa26.12■■□□□ 1.77
CCDC9-204ENST00000599398 APOA5Q6Q788 366 aa26.12■■□□□ 1.77
CCDC9-204ENST00000599398 ANKRD33Q7Z3H0 272 aa26.12■■□□□ 1.77
CCDC9-204ENST00000599398 FCHSD1Q86WN1 690 aa26.12■■□□□ 1.77
CCDC9-204ENST00000599398 COPS5Q92905 334 aa26.12■■□□□ 1.77
CCDC9-204ENST00000599398 TRIM43Q96BQ3 446 aaPredicted RBP26.12■■□□□ 1.77
CCDC9-204ENST00000599398 JAKMIP1Q96N16 626 aaKnown RBP26.12■■□□□ 1.77
CCDC9-204ENST00000599398 TMEM39AQ9NV64 488 aa26.12■■□□□ 1.77
CCDC9-204ENST00000599398 ARVCFO00192 962 aa26.11■■□□□ 1.77
CCDC9-204ENST00000599398 MYCLP12524 364 aaPredicted RBP26.11■■□□□ 1.77
CCDC9-204ENST00000599398 CPT1AP50416 773 aa26.11■■□□□ 1.77
CCDC9-204ENST00000599398 BRDTQ58F21 947 aaPredicted RBP26.11■■□□□ 1.77
CCDC9-204ENST00000599398 TOX2Q96NM4 488 aa26.11■■□□□ 1.77
CCDC9-204ENST00000599398 SNX14Q9Y5W7 946 aa26.11■■□□□ 1.77
CCDC9-204ENST00000599398 ARIH2O95376 493 aa26.1■■□□□ 1.77
CCDC9-204ENST00000599398 CPA1P15085 419 aa26.1■■□□□ 1.77
CCDC9-204ENST00000599398 FAAP100Q0VG06 881 aa26.1■■□□□ 1.77
CCDC9-204ENST00000599398 TMTC3Q6ZXV5 915 aa26.1■■□□□ 1.77
CCDC9-204ENST00000599398 TDHQ8IZJ6 230 aa26.1■■□□□ 1.77
CCDC9-204ENST00000599398 BADQ92934 168 aa26.1■■□□□ 1.77
CCDC9-204ENST00000599398 KCNB2Q92953 911 aa26.1■■□□□ 1.77
CCDC9-204ENST00000599398 PDCD2LQ9BRP1 358 aa26.1■■□□□ 1.77
CCDC9-204ENST00000599398 NAP1L2Q9ULW6 460 aaPredicted RBP26.1■■□□□ 1.77
CCDC9-204ENST00000599398 ZBTB43O43298 467 aa26.09■■□□□ 1.77
CCDC9-204ENST00000599398 EIF3JO75822 258 aaKnown RBP26.09■■□□□ 1.77
CCDC9-204ENST00000599398 MYL3P08590 195 aa26.09■■□□□ 1.77
CCDC9-204ENST00000599398 RAG1P15918 1043 aa26.09■■□□□ 1.77
CCDC9-204ENST00000599398 CDK7P50613 346 aa26.09■■□□□ 1.77
CCDC9-204ENST00000599398 POLR3EQ9NVU0 708 aa26.09■■□□□ 1.77
CCDC9-204ENST00000599398 BRPF3Q9ULD4 1205 aa26.09■■□□□ 1.77
CCDC9-204ENST00000599398 KLF18A0A0U1RQI7 1052 aa26.08■■□□□ 1.77
CCDC9-204ENST00000599398 hCG_1642624A0A1W2PR95 340 aa26.08■■□□□ 1.77
CCDC9-204ENST00000599398 PSMC6P62333 389 aa26.08■■□□□ 1.77
CCDC9-204ENST00000599398 ITGA7Q13683 1181 aa26.08■■□□□ 1.77
CCDC9-204ENST00000599398 PGM5Q15124 567 aa26.08■■□□□ 1.77
CCDC9-204ENST00000599398 RTN1Q16799 776 aa26.08■■□□□ 1.77
CCDC9-204ENST00000599398 LY6KQ17RY6 165 aa26.08■■□□□ 1.77
CCDC9-204ENST00000599398 BLOC1S2Q6QNY1 142 aa26.08■■□□□ 1.77
CCDC9-204ENST00000599398 CUL5Q93034 780 aa26.08■■□□□ 1.77
CCDC9-204ENST00000599398 RBM28Q9NW13 759 aaKnown RBP26.08■■□□□ 1.77
CCDC9-204ENST00000599398 LAMA3Q16787 3333 aa26.07■■□□□ 1.76
CCDC9-204ENST00000599398 KIAA0355O15063 1070 aa26.07■■□□□ 1.76
CCDC9-204ENST00000599398 TLR3O15455 904 aaKnown RBP26.07■■□□□ 1.76
CCDC9-204ENST00000599398 CCDC62Q6P9F0 684 aa26.07■■□□□ 1.76
CCDC9-204ENST00000599398 SMARCC2Q8TAQ2 1214 aa26.07■■□□□ 1.76
CCDC9-204ENST00000599398 MRVI1Q9Y6F6 885 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms