RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 ANAPC15P60006 121 aa15.07■□□□□ 0
SCAF1-202ENST00000595242 WDR5P61964 334 aaKnown RBP15.07■□□□□ 0
SCAF1-202ENST00000595242 KIAA1211Q6ZU35 1233 aa15.07■□□□□ 0
SCAF1-202ENST00000595242 NYAP2Q9P242 653 aa15.07■□□□□ 0
SCAF1-202ENST00000595242 FEM1BQ9UK73 627 aa15.07■□□□□ 0
SCAF1-202ENST00000595242 ATG2AQ2TAZ0 1938 aa15.07■□□□□ 0
SCAF1-202ENST00000595242 GOLIM4O00461 696 aa15.06■□□□□ 0
SCAF1-202ENST00000595242 DEFB103AP81534 67 aa15.06■□□□□ 0
SCAF1-202ENST00000595242 ZP2Q05996 745 aa15.06■□□□□ 0
SCAF1-202ENST00000595242 BFSP2Q13515 415 aa15.06■□□□□ 0
SCAF1-202ENST00000595242 NBPF20Q3BBV1 942 aa15.06■□□□□ 0
SCAF1-202ENST00000595242 SLFNL1Q499Z3 407 aa15.06■□□□□ 0
SCAF1-202ENST00000595242 PPP1R13LQ8WUF5 828 aa15.06■□□□□ 0
SCAF1-202ENST00000595242 RAD9AQ99638 391 aa15.06■□□□□ 0
SCAF1-202ENST00000595242 MTG1Q9BT17 334 aaPredicted RBP15.06■□□□□ 0
SCAF1-202ENST00000595242 GPHNQ9NQX3 736 aaPredicted RBP15.06■□□□□ 0
SCAF1-202ENST00000595242 LINC01553A4QN01 128 aa15.05■□□□□ -0
SCAF1-202ENST00000595242 SGSM2O43147 1006 aa15.05■□□□□ -0
SCAF1-202ENST00000595242 GJB5O95377 273 aa15.05■□□□□ -0
SCAF1-202ENST00000595242 CPT1AP50416 773 aa15.05■□□□□ -0
SCAF1-202ENST00000595242 FOXK2Q01167 660 aa15.05■□□□□ -0
SCAF1-202ENST00000595242 DUSP28Q4G0W2 176 aa15.05■□□□□ -0
SCAF1-202ENST00000595242 NFRKBQ6P4R8 1299 aa15.05■□□□□ -0
SCAF1-202ENST00000595242 CTR9Q6PD62 1173 aa15.05■□□□□ -0
SCAF1-202ENST00000595242 EVI5LQ96CN4 794 aa15.05■□□□□ -0
SCAF1-202ENST00000595242 VTA1Q9NP79 307 aa15.05■□□□□ -0
SCAF1-202ENST00000595242 RNF146Q9NTX7 359 aa15.05■□□□□ -0
SCAF1-202ENST00000595242 CLIP2Q9UDT6 1046 aa15.05■□□□□ -0
SCAF1-202ENST00000595242 PRKAG3Q9UGI9 489 aa15.05■□□□□ -0
SCAF1-202ENST00000595242 KMT2EQ8IZD2 1858 aa15.05■□□□□ -0
SCAF1-202ENST00000595242 PTPRZ1P23471 2315 aaPredicted RBP15.05■□□□□ -0
SCAF1-202ENST00000595242 ZFHX2Q9C0A1 2572 aaPredicted RBP15.05■□□□□ -0
SCAF1-202ENST00000595242 RAD50Q92878 1312 aa15.04■□□□□ -0
SCAF1-202ENST00000595242 C19orf67A6NJJ6 358 aa15.04■□□□□ -0
SCAF1-202ENST00000595242 DDIT3P35638 169 aa15.04■□□□□ -0
SCAF1-202ENST00000595242 LRRFIP1Q32MZ4 808 aaKnown RBP15.04■□□□□ -0
SCAF1-202ENST00000595242 TICAM2Q86XR7 235 aa15.04■□□□□ -0
SCAF1-202ENST00000595242 PRSS33Q8NF86 280 aa15.04■□□□□ -0
SCAF1-202ENST00000595242 TRERF1Q96PN7 1200 aa15.04■□□□□ -0
SCAF1-202ENST00000595242 DNAJC2Q99543 621 aaKnown RBP15.04■□□□□ -0
SCAF1-202ENST00000595242 UPF3BQ9BZI7 483 aaKnown RBP15.04■□□□□ -0
SCAF1-202ENST00000595242 NOD1Q9Y239 953 aa15.04■□□□□ -0
SCAF1-202ENST00000595242 FAM50BQ9Y247 325 aa15.04■□□□□ -0
SCAF1-202ENST00000595242 K7ELQ4 463 aaPredicted RBP15.03■□□□□ -0
SCAF1-202ENST00000595242 HIP1O00291 1037 aa15.03■□□□□ -0
SCAF1-202ENST00000595242 FDX1P10109 184 aa15.03■□□□□ -0
SCAF1-202ENST00000595242 ATP5JP18859 108 aa15.03■□□□□ -0
SCAF1-202ENST00000595242 RASA1P20936 1047 aa15.03■□□□□ -0
SCAF1-202ENST00000595242 MCCP23508 829 aa15.03■□□□□ -0
SCAF1-202ENST00000595242 IRS1P35568 1242 aa15.03■□□□□ -0
SCAF1-202ENST00000595242 PTPN5P54829 565 aa15.03■□□□□ -0
SCAF1-202ENST00000595242 GPNMBQ14956 572 aa15.03■□□□□ -0
SCAF1-202ENST00000595242 ADHFE1Q8IWW8 467 aa15.03■□□□□ -0
SCAF1-202ENST00000595242 WDR11Q9BZH6 1224 aa15.03■□□□□ -0
SCAF1-202ENST00000595242 SLC4A4Q9Y6R1 1079 aa15.03■□□□□ -0
SCAF1-202ENST00000595242 MYO15AQ9UKN7 3530 aa15.02■□□□□ -0
SCAF1-202ENST00000595242 RALGAPA2Q2PPJ7 1873 aa15.02■□□□□ -0
SCAF1-202ENST00000595242 ALAS1P13196 640 aa15.02■□□□□ -0
SCAF1-202ENST00000595242 ADD2P35612 726 aa15.02■□□□□ -0
SCAF1-202ENST00000595242 PTPN11Q06124 597 aaPredicted RBP15.02■□□□□ -0
SCAF1-202ENST00000595242 IER5LQ5T953 404 aa15.02■□□□□ -0
SCAF1-202ENST00000595242 EP400NLQ6ZTU2 488 aa15.02■□□□□ -0
SCAF1-202ENST00000595242 STK11IPQ8N1F8 1099 aa15.02■□□□□ -0
SCAF1-202ENST00000595242 FBXO22Q8NEZ5 403 aa15.02■□□□□ -0
SCAF1-202ENST00000595242 OR6J1Q8NGC5 347 aa15.02■□□□□ -0
SCAF1-202ENST00000595242 RUFY2Q8WXA3 655 aa15.02■□□□□ -0
SCAF1-202ENST00000595242 MRPL38Q96DV4 380 aaKnown RBP15.02■□□□□ -0
SCAF1-202ENST00000595242 PURBQ96QR8 312 aaKnown RBP15.02■□□□□ -0
SCAF1-202ENST00000595242 C17orf80Q9BSJ5 609 aa15.02■□□□□ -0
SCAF1-202ENST00000595242 MKNK2Q9HBH9 465 aa15.02■□□□□ -0
SCAF1-202ENST00000595242 CYP39A1Q9NYL5 469 aa15.02■□□□□ -0
SCAF1-202ENST00000595242 CTNNA3Q9UI47 895 aa15.02■□□□□ -0
SCAF1-202ENST00000595242 CACNA1HO95180 2353 aa15.01□□□□□ -0.01
SCAF1-202ENST00000595242 CD2BP2O95400 341 aaKnown RBP15.01□□□□□ -0.01
SCAF1-202ENST00000595242 BMP3P12645 472 aa15.01□□□□□ -0.01
SCAF1-202ENST00000595242 PTGISQ16647 500 aa15.01□□□□□ -0.01
SCAF1-202ENST00000595242 PTPROQ16827 1216 aa15.01□□□□□ -0.01
SCAF1-202ENST00000595242 TKFCQ3LXA3 575 aa15.01□□□□□ -0.01
SCAF1-202ENST00000595242 BRDTQ58F21 947 aaPredicted RBP15.01□□□□□ -0.01
SCAF1-202ENST00000595242 FAM117BQ6P1L5 589 aa15.01□□□□□ -0.01
SCAF1-202ENST00000595242 CNKSR3Q6P9H4 555 aa15.01□□□□□ -0.01
SCAF1-202ENST00000595242 CCDC155Q8N6L0 562 aa15.01□□□□□ -0.01
SCAF1-202ENST00000595242 MORC4Q8TE76 937 aa15.01□□□□□ -0.01
SCAF1-202ENST00000595242 AFAP1L1Q8TED9 768 aa15.01□□□□□ -0.01
SCAF1-202ENST00000595242 MKL1Q969V6 931 aa15.01□□□□□ -0.01
SCAF1-202ENST00000595242 PABPC5Q96DU9 382 aaKnown RBP15.01□□□□□ -0.01
SCAF1-202ENST00000595242 LSG1Q9H089 658 aaKnown RBP15.01□□□□□ -0.01
SCAF1-202ENST00000595242 IL25Q9H293 177 aa15.01□□□□□ -0.01
SCAF1-202ENST00000595242 MUTYHQ9UIF7 546 aa15.01□□□□□ -0.01
SCAF1-202ENST00000595242 CIZ1Q9ULV3 898 aaPredicted RBP15.01□□□□□ -0.01
SCAF1-202ENST00000595242 MYH7BA7E2Y1 1941 aa15.01□□□□□ -0.01
SCAF1-202ENST00000595242 ABHD14A-ACY1A0A1B0GW23 586 aa15□□□□□ -0.01
SCAF1-202ENST00000595242 TMEM232C9JQI7 657 aa15□□□□□ -0.01
SCAF1-202ENST00000595242 GFRA3O60609 400 aa15□□□□□ -0.01
SCAF1-202ENST00000595242 HSPA4P34932 840 aa15□□□□□ -0.01
SCAF1-202ENST00000595242 STAT2P52630 851 aa15□□□□□ -0.01
SCAF1-202ENST00000595242 CHMP4BP1P59074 171 aa15□□□□□ -0.01
SCAF1-202ENST00000595242 NFKBIBQ15653 356 aa15□□□□□ -0.01
SCAF1-202ENST00000595242 HERC4Q5GLZ8 1057 aaPredicted RBP15□□□□□ -0.01
SCAF1-202ENST00000595242 MUM1L1Q5H9M0 696 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms