RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 SYKP43405 635 aa14.97□□□□□ -0.01
VRK3-205ENST00000593919 MUM1L1Q5H9M0 696 aa14.97□□□□□ -0.01
VRK3-205ENST00000593919 USP49Q70CQ1 688 aa14.97□□□□□ -0.01
VRK3-205ENST00000593919 FCHSD1Q86WN1 690 aa14.97□□□□□ -0.01
VRK3-205ENST00000593919 HOXC10Q9NYD6 342 aa14.97□□□□□ -0.01
VRK3-205ENST00000593919 AP5Z1O43299 807 aa14.96□□□□□ -0.01
VRK3-205ENST00000593919 ZNF202O95125 648 aa14.96□□□□□ -0.01
VRK3-205ENST00000593919 ITGBL1O95965 494 aaPredicted RBP14.96□□□□□ -0.01
VRK3-205ENST00000593919 OR52Z1P0C646 297 aa14.96□□□□□ -0.01
VRK3-205ENST00000593919 HOXA7P31268 230 aaPredicted RBP14.96□□□□□ -0.01
VRK3-205ENST00000593919 SREBF1P36956 1147 aa14.96□□□□□ -0.01
VRK3-205ENST00000593919 OAZ1P54368 228 aa14.96□□□□□ -0.01
VRK3-205ENST00000593919 ARHGAP4P98171 946 aa14.96□□□□□ -0.01
VRK3-205ENST00000593919 MOGSQ13724 837 aa14.96□□□□□ -0.01
VRK3-205ENST00000593919 TMEM132BQ14DG7 1078 aa14.96□□□□□ -0.01
VRK3-205ENST00000593919 SNRNP48Q6IEG0 339 aaKnown RBP14.96□□□□□ -0.01
VRK3-205ENST00000593919 PPP4R3AQ6IN85 833 aa14.96□□□□□ -0.01
VRK3-205ENST00000593919 LUZP1Q86V48 1076 aa14.96□□□□□ -0.01
VRK3-205ENST00000593919 C2orf69Q8N8R5 385 aa14.96□□□□□ -0.01
VRK3-205ENST00000593919 PNMA2Q9UL42 364 aa14.96□□□□□ -0.01
VRK3-205ENST00000593919 KCNH3Q9ULD8 1083 aa14.96□□□□□ -0.01
VRK3-205ENST00000593919 RIPK3Q9Y572 518 aa14.96□□□□□ -0.01
VRK3-205ENST00000593919 GCFC2P16383 781 aaKnown RBP14.96□□□□□ -0.01
VRK3-205ENST00000593919 PRPHP41219 470 aa14.96□□□□□ -0.01
VRK3-205ENST00000593919 HSD17B4P51659 736 aa14.96□□□□□ -0.01
VRK3-205ENST00000593919 USP11P51784 963 aa14.96□□□□□ -0.01
VRK3-205ENST00000593919 CHADLQ6NUI6 762 aa14.96□□□□□ -0.01
VRK3-205ENST00000593919 SYMPKQ92797 1274 aaKnown RBP14.96□□□□□ -0.01
VRK3-205ENST00000593919 EPSTI1Q96J88 318 aa14.96□□□□□ -0.01
VRK3-205ENST00000593919 CBX8Q9HC52 389 aa14.96□□□□□ -0.01
VRK3-205ENST00000593919 FAM13BQ9NYF5 915 aa14.96□□□□□ -0.01
VRK3-205ENST00000593919 AGTPBP1Q9UPW5 1226 aa14.96□□□□□ -0.01
VRK3-205ENST00000593919 ATP2A1O14983 1001 aa14.95□□□□□ -0.02
VRK3-205ENST00000593919 SNAPC2Q13487 334 aa14.95□□□□□ -0.02
VRK3-205ENST00000593919 CST9Q5W186 159 aa14.95□□□□□ -0.02
VRK3-205ENST00000593919 DTHD1Q6ZMT9 781 aa14.95□□□□□ -0.02
VRK3-205ENST00000593919 TRERF1Q96PN7 1200 aa14.95□□□□□ -0.02
VRK3-205ENST00000593919 DDX25Q9UHL0 483 aaKnown RBP14.95□□□□□ -0.02
VRK3-205ENST00000593919 LONP1P36776 959 aaKnown RBP14.94□□□□□ -0.02
VRK3-205ENST00000593919 IRX3P78415 501 aaPredicted RBP14.94□□□□□ -0.02
VRK3-205ENST00000593919 GHRHRQ02643 423 aa14.94□□□□□ -0.02
VRK3-205ENST00000593919 CALCRLQ16602 461 aa14.94□□□□□ -0.02
VRK3-205ENST00000593919 POTEEQ6S8J3 1075 aa14.94□□□□□ -0.02
VRK3-205ENST00000593919 FASTKD5Q7L8L6 764 aaKnown RBP14.94□□□□□ -0.02
VRK3-205ENST00000593919 MCF2L2Q86YR7 1114 aa14.94□□□□□ -0.02
VRK3-205ENST00000593919 NAP1L5Q96NT1 182 aaPredicted RBP14.94□□□□□ -0.02
VRK3-205ENST00000593919 MTMR9Q96QG7 549 aa14.94□□□□□ -0.02
VRK3-205ENST00000593919 TEX13BQ9BXU2 312 aa14.94□□□□□ -0.02
VRK3-205ENST00000593919 ASCC2Q9H1I8 757 aaPredicted RBP14.94□□□□□ -0.02
VRK3-205ENST00000593919 DNAJC25Q9H1X3 360 aa14.94□□□□□ -0.02
VRK3-205ENST00000593919 RNF146Q9NTX7 359 aa14.94□□□□□ -0.02
VRK3-205ENST00000593919 PLS1Q14651 629 aa14.94□□□□□ -0.02
VRK3-205ENST00000593919 MOXD1Q6UVY6 613 aa14.94□□□□□ -0.02
VRK3-205ENST00000593919 LBX2Q6XYB7 198 aa14.94□□□□□ -0.02
VRK3-205ENST00000593919 PDILTQ8N807 584 aa14.94□□□□□ -0.02
VRK3-205ENST00000593919 NAP1L4Q99733 375 aaKnown RBP14.94□□□□□ -0.02
VRK3-205ENST00000593919 COL20A1Q9P218 1284 aa14.94□□□□□ -0.02
VRK3-205ENST00000593919 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.94□□□□□ -0.02
VRK3-205ENST00000593919 LCTP09848 1927 aa14.94□□□□□ -0.02
VRK3-205ENST00000593919 CYP3A7-CYP3A51PA0A087WV96 503 aa14.93□□□□□ -0.02
VRK3-205ENST00000593919 CTAGE5O15320 804 aa14.93□□□□□ -0.02
VRK3-205ENST00000593919 POLR2DO15514 142 aaKnown RBP14.93□□□□□ -0.02
VRK3-205ENST00000593919 CYP3A7P24462 503 aa14.93□□□□□ -0.02
VRK3-205ENST00000593919 RPS6P62753 249 aaKnown RBP14.93□□□□□ -0.02
VRK3-205ENST00000593919 MBOAT7Q96N66 472 aa14.93□□□□□ -0.02
VRK3-205ENST00000593919 A0A087X0B3 334 aa14.93□□□□□ -0.02
VRK3-205ENST00000593919 FAM86B1E9PN63 330 aa14.93□□□□□ -0.02
VRK3-205ENST00000593919 PEX10O60683 326 aa14.93□□□□□ -0.02
VRK3-205ENST00000593919 CYP3A4P08684 503 aa14.93□□□□□ -0.02
VRK3-205ENST00000593919 FAM86B2P0C5J1 330 aa14.93□□□□□ -0.02
VRK3-205ENST00000593919 CDC25AP30304 524 aa14.93□□□□□ -0.02
VRK3-205ENST00000593919 STAT3P40763 770 aa14.93□□□□□ -0.02
VRK3-205ENST00000593919 MKRN3Q13064 507 aaKnown RBP14.93□□□□□ -0.02
VRK3-205ENST00000593919 GPAT2Q6NUI2 795 aa14.93□□□□□ -0.02
VRK3-205ENST00000593919 MB21D1Q8N884 522 aa14.93□□□□□ -0.02
VRK3-205ENST00000593919 TIGD1Q96MW7 591 aa14.93□□□□□ -0.02
VRK3-205ENST00000593919 SDF4Q9BRK5 362 aa14.93□□□□□ -0.02
VRK3-205ENST00000593919 BTBD7Q9P203 1132 aa14.93□□□□□ -0.02
VRK3-205ENST00000593919 ZNF500O60304 480 aaPredicted RBP14.92□□□□□ -0.02
VRK3-205ENST00000593919 CIITAP33076 1130 aa14.92□□□□□ -0.02
VRK3-205ENST00000593919 TXKP42681 527 aa14.92□□□□□ -0.02
VRK3-205ENST00000593919 ZNF165P49910 485 aa14.92□□□□□ -0.02
VRK3-205ENST00000593919 HERVK_113P62684 666 aa14.92□□□□□ -0.02
VRK3-205ENST00000593919 UBXN2AP68543 259 aa14.92□□□□□ -0.02
VRK3-205ENST00000593919 LONRF3Q496Y0 759 aa14.92□□□□□ -0.02
VRK3-205ENST00000593919 PRR16Q569H4 304 aa14.92□□□□□ -0.02
VRK3-205ENST00000593919 NSMFQ6X4W1 530 aa14.92□□□□□ -0.02
VRK3-205ENST00000593919 SLC30A10Q6XR72 485 aa14.92□□□□□ -0.02
VRK3-205ENST00000593919 SYTL5Q8TDW5 730 aaPredicted RBP14.92□□□□□ -0.02
VRK3-205ENST00000593919 HAS1Q92839 578 aa14.92□□□□□ -0.02
VRK3-205ENST00000593919 LENG9Q96B70 501 aa14.92□□□□□ -0.02
VRK3-205ENST00000593919 MS4A4AQ96JQ5 239 aa14.92□□□□□ -0.02
VRK3-205ENST00000593919 ZNF830Q96NB3 372 aaPredicted RBP14.92□□□□□ -0.02
VRK3-205ENST00000593919 EHMT1Q9H9B1 1298 aa14.92□□□□□ -0.02
VRK3-205ENST00000593919 MAP3K20Q9NYL2 800 aaKnown RBP14.92□□□□□ -0.02
VRK3-205ENST00000593919 PP2D1A8MPX8 630 aa14.91□□□□□ -0.02
VRK3-205ENST00000593919 TECP42680 631 aa14.91□□□□□ -0.02
VRK3-205ENST00000593919 PABPC4Q13310 644 aaKnown RBP eCLIP14.91□□□□□ -0.02
VRK3-205ENST00000593919 RNF207Q6ZRF8 634 aa14.91□□□□□ -0.02
VRK3-205ENST00000593919 SAMD3Q8N6K7 520 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms