RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 DDAH1O94760 285 aa16.11■□□□□ 0.17
APOC1-208ENST00000592535 RAG1P15918 1043 aa16.11■□□□□ 0.17
APOC1-208ENST00000592535 HSD17B4P51659 736 aa16.11■□□□□ 0.17
APOC1-208ENST00000592535 GHRHRQ02643 423 aa16.11■□□□□ 0.17
APOC1-208ENST00000592535 PPP2R5BQ15173 497 aa16.11■□□□□ 0.17
APOC1-208ENST00000592535 FAM126BQ8IXS8 530 aa16.11■□□□□ 0.17
APOC1-208ENST00000592535 OR6J1Q8NGC5 347 aa16.11■□□□□ 0.17
APOC1-208ENST00000592535 COPS5Q92905 334 aa16.11■□□□□ 0.17
APOC1-208ENST00000592535 TMEM87BQ96K49 555 aa16.11■□□□□ 0.17
APOC1-208ENST00000592535 TBX21Q9UL17 535 aa16.11■□□□□ 0.17
APOC1-208ENST00000592535 PNMA6FA0A0J9YX94 578 aa16.1■□□□□ 0.17
APOC1-208ENST00000592535 ARIH2O95376 493 aa16.1■□□□□ 0.17
APOC1-208ENST00000592535 CENPBP07199 599 aaPredicted RBP16.1■□□□□ 0.17
APOC1-208ENST00000592535 TXNP10599 105 aaKnown RBP16.1■□□□□ 0.17
APOC1-208ENST00000592535 EIF2AK2P19525 551 aaKnown RBP16.1■□□□□ 0.17
APOC1-208ENST00000592535 PSMC6P62333 389 aa16.1■□□□□ 0.17
APOC1-208ENST00000592535 ITGA7Q13683 1181 aa16.1■□□□□ 0.17
APOC1-208ENST00000592535 SHHQ15465 462 aa16.1■□□□□ 0.17
APOC1-208ENST00000592535 C9orf50Q5SZB4 431 aa16.1■□□□□ 0.17
APOC1-208ENST00000592535 ARHGEF16Q5VV41 709 aa16.1■□□□□ 0.17
APOC1-208ENST00000592535 NFXL1Q6ZNB6 911 aa16.1■□□□□ 0.17
APOC1-208ENST00000592535 SLC43A3Q8NBI5 491 aa16.1■□□□□ 0.17
APOC1-208ENST00000592535 CTCFLQ8NI51 663 aaPredicted RBP16.1■□□□□ 0.17
APOC1-208ENST00000592535 PIBF1Q8WXW3 757 aa16.1■□□□□ 0.17
APOC1-208ENST00000592535 MAP3K14Q99558 947 aa16.1■□□□□ 0.17
APOC1-208ENST00000592535 LRRC2Q9BYS8 371 aa16.1■□□□□ 0.17
APOC1-208ENST00000592535 PXMP2Q9NR77 195 aa16.1■□□□□ 0.17
APOC1-208ENST00000592535 GRIN2DO15399 1336 aa16.1■□□□□ 0.17
APOC1-208ENST00000592535 MYH7BA7E2Y1 1941 aa16.09■□□□□ 0.17
APOC1-208ENST00000592535 SCN10AQ9Y5Y9 1956 aa16.09■□□□□ 0.17
APOC1-208ENST00000592535 CCDC69A6NI79 296 aa16.09■□□□□ 0.17
APOC1-208ENST00000592535 NKRFO15226 690 aaKnown RBP eCLIP16.09■□□□□ 0.17
APOC1-208ENST00000592535 HOXA13P31271 388 aaPredicted RBP16.09■□□□□ 0.17
APOC1-208ENST00000592535 CPT1AP50416 773 aa16.09■□□□□ 0.17
APOC1-208ENST00000592535 EPHB4P54760 987 aa16.09■□□□□ 0.17
APOC1-208ENST00000592535 TTLL4Q14679 1199 aa16.09■□□□□ 0.17
APOC1-208ENST00000592535 STXBP2Q15833 593 aa16.09■□□□□ 0.17
APOC1-208ENST00000592535 RNF20Q5VTR2 975 aa16.09■□□□□ 0.17
APOC1-208ENST00000592535 SEPT14Q6ZU15 432 aa16.09■□□□□ 0.17
APOC1-208ENST00000592535 RAB11FIP4Q86YS3 637 aa16.09■□□□□ 0.17
APOC1-208ENST00000592535 IWS1Q96ST2 819 aa16.09■□□□□ 0.17
APOC1-208ENST00000592535 TLR3O15455 904 aaKnown RBP16.08■□□□□ 0.16
APOC1-208ENST00000592535 PLEKHA8P1O95397 391 aa16.08■□□□□ 0.16
APOC1-208ENST00000592535 TIMP1P01033 207 aa16.08■□□□□ 0.16
APOC1-208ENST00000592535 CD4P01730 458 aa16.08■□□□□ 0.16
APOC1-208ENST00000592535 NR3C2P08235 984 aa16.08■□□□□ 0.16
APOC1-208ENST00000592535 MYL3P08590 195 aa16.08■□□□□ 0.16
APOC1-208ENST00000592535 RXRAP19793 462 aa16.08■□□□□ 0.16
APOC1-208ENST00000592535 KIF5BP33176 963 aa16.08■□□□□ 0.16
APOC1-208ENST00000592535 LIFRP42702 1097 aa16.08■□□□□ 0.16
APOC1-208ENST00000592535 PURAQ00577 322 aaKnown RBP16.08■□□□□ 0.16
APOC1-208ENST00000592535 TRAF1Q13077 416 aa16.08■□□□□ 0.16
APOC1-208ENST00000592535 CCDC62Q6P9F0 684 aa16.08■□□□□ 0.16
APOC1-208ENST00000592535 TMTC2Q8N394 836 aa16.08■□□□□ 0.16
APOC1-208ENST00000592535 SPZ1Q9BXG8 430 aa16.08■□□□□ 0.16
APOC1-208ENST00000592535 POLR3EQ9NVU0 708 aa16.08■□□□□ 0.16
APOC1-208ENST00000592535 MAP3K20Q9NYL2 800 aaKnown RBP16.08■□□□□ 0.16
APOC1-208ENST00000592535 GCOM1H8Y6P7 765 aaPredicted RBP16.07■□□□□ 0.16
APOC1-208ENST00000592535 POLR2MP0CAP2 368 aa16.07■□□□□ 0.16
APOC1-208ENST00000592535 FPGSQ05932 587 aa16.07■□□□□ 0.16
APOC1-208ENST00000592535 RASEFQ8IZ41 740 aa16.07■□□□□ 0.16
APOC1-208ENST00000592535 SAMD3Q8N6K7 520 aa16.07■□□□□ 0.16
APOC1-208ENST00000592535 NEK1Q96PY6 1258 aa16.07■□□□□ 0.16
APOC1-208ENST00000592535 PDCD2LQ9BRP1 358 aa16.07■□□□□ 0.16
APOC1-208ENST00000592535 PPP1R12CQ9BZL4 782 aa16.07■□□□□ 0.16
APOC1-208ENST00000592535 LAMA3Q16787 3333 aa16.06■□□□□ 0.16
APOC1-208ENST00000592535 A6NJR5 290 aa16.06■□□□□ 0.16
APOC1-208ENST00000592535 EIF3JO75822 258 aaKnown RBP16.06■□□□□ 0.16
APOC1-208ENST00000592535 NEFLP07196 543 aa16.06■□□□□ 0.16
APOC1-208ENST00000592535 MYCLP12524 364 aaPredicted RBP16.06■□□□□ 0.16
APOC1-208ENST00000592535 SMARCA1P28370 1054 aa16.06■□□□□ 0.16
APOC1-208ENST00000592535 LY6KQ17RY6 165 aa16.06■□□□□ 0.16
APOC1-208ENST00000592535 ADCK5Q3MIX3 580 aa16.06■□□□□ 0.16
APOC1-208ENST00000592535 BRDTQ58F21 947 aaPredicted RBP16.06■□□□□ 0.16
APOC1-208ENST00000592535 GPR153Q6NV75 609 aa16.06■□□□□ 0.16
APOC1-208ENST00000592535 FCHSD1Q86WN1 690 aa16.06■□□□□ 0.16
APOC1-208ENST00000592535 CMTR1Q8N1G2 835 aaKnown RBP16.06■□□□□ 0.16
APOC1-208ENST00000592535 SRBD1Q8N5C6 995 aaKnown RBP16.06■□□□□ 0.16
APOC1-208ENST00000592535 IL31RAQ8NI17 732 aa16.06■□□□□ 0.16
APOC1-208ENST00000592535 RRP36Q96EU6 259 aaKnown RBP16.06■□□□□ 0.16
APOC1-208ENST00000592535 TCEANC2Q96MN5 208 aa16.06■□□□□ 0.16
APOC1-208ENST00000592535 LZTS2Q9BRK4 669 aa16.06■□□□□ 0.16
APOC1-208ENST00000592535 MTG1Q9BT17 334 aaPredicted RBP16.06■□□□□ 0.16
APOC1-208ENST00000592535 TRPV6Q9H1D0 765 aa16.06■□□□□ 0.16
APOC1-208ENST00000592535 SLC12A7Q9Y666 1083 aa16.06■□□□□ 0.16
APOC1-208ENST00000592535 SZT2Q5T011 3432 aa16.06■□□□□ 0.16
APOC1-208ENST00000592535 B4GALT4O60513 344 aa16.05■□□□□ 0.16
APOC1-208ENST00000592535 GH1P01241 217 aa16.05■□□□□ 0.16
APOC1-208ENST00000592535 CALM1P0DP23 149 aa16.05■□□□□ 0.16
APOC1-208ENST00000592535 CALM2P0DP24 149 aa16.05■□□□□ 0.16
APOC1-208ENST00000592535 CALM3P0DP25 149 aa16.05■□□□□ 0.16
APOC1-208ENST00000592535 GNAQP50148 359 aa16.05■□□□□ 0.16
APOC1-208ENST00000592535 EXOSC10Q01780 885 aaKnown RBP16.05■□□□□ 0.16
APOC1-208ENST00000592535 ARHGAP1Q07960 439 aa16.05■□□□□ 0.16
APOC1-208ENST00000592535 PGM5Q15124 567 aa16.05■□□□□ 0.16
APOC1-208ENST00000592535 TSGA10IPQ3SY00 556 aa16.05■□□□□ 0.16
APOC1-208ENST00000592535 MFSD5Q6N075 450 aa16.05■□□□□ 0.16
APOC1-208ENST00000592535 Q7L0L9 218 aa16.05■□□□□ 0.16
APOC1-208ENST00000592535 SGMS1Q86VZ5 419 aa16.05■□□□□ 0.16
APOC1-208ENST00000592535 PPP1R13LQ8WUF5 828 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms