RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 CDC37Q16543 378 aaPredicted RBP16.74■□□□□ 0.27
CIRBP-228ENST00000590347 NBPF15Q8N660 670 aa16.74■□□□□ 0.27
CIRBP-228ENST00000590347 TRIM58Q8NG06 486 aa16.74■□□□□ 0.27
CIRBP-228ENST00000590347 SPATA20Q8TB22 786 aa16.74■□□□□ 0.27
CIRBP-228ENST00000590347 MTMR8Q96EF0 704 aa16.74■□□□□ 0.27
CIRBP-228ENST00000590347 TSC22D3Q99576 134 aa16.74■□□□□ 0.27
CIRBP-228ENST00000590347 MTRQ99707 1265 aa16.74■□□□□ 0.27
CIRBP-228ENST00000590347 PAPOLBQ9NRJ5 636 aaKnown RBP16.74■□□□□ 0.27
CIRBP-228ENST00000590347 TRPM3Q9HCF6 1732 aaPredicted RBP16.74■□□□□ 0.27
CIRBP-228ENST00000590347 CTDSPL2Q05D32 466 aa16.74■□□□□ 0.27
CIRBP-228ENST00000590347 NTRK3Q16288 839 aa16.74■□□□□ 0.27
CIRBP-228ENST00000590347 KRT71Q3SY84 523 aa16.74■□□□□ 0.27
CIRBP-228ENST00000590347 FAM47EQ6ZV65 393 aa16.74■□□□□ 0.27
CIRBP-228ENST00000590347 TRIM74Q86UV6 250 aa16.74■□□□□ 0.27
CIRBP-228ENST00000590347 TRIM73Q86UV7 250 aa16.74■□□□□ 0.27
CIRBP-228ENST00000590347 RPUSD2Q8IZ73 545 aaKnown RBP16.74■□□□□ 0.27
CIRBP-228ENST00000590347 PAGR1Q9BTK6 254 aa16.74■□□□□ 0.27
CIRBP-228ENST00000590347 TMBIM4Q9HC24 238 aa16.74■□□□□ 0.27
CIRBP-228ENST00000590347 SLC12A6Q9UHW9 1150 aa16.74■□□□□ 0.27
CIRBP-228ENST00000590347 HYOU1Q9Y4L1 999 aa16.74■□□□□ 0.27
CIRBP-228ENST00000590347 SRPRBQ9Y5M8 271 aaKnown RBP16.74■□□□□ 0.27
CIRBP-228ENST00000590347 EPHB6O15197 1021 aa16.74■□□□□ 0.27
CIRBP-228ENST00000590347 GPAA1O43292 621 aa16.74■□□□□ 0.27
CIRBP-228ENST00000590347 TRAF1Q13077 416 aa16.74■□□□□ 0.27
CIRBP-228ENST00000590347 B4GALNT2Q8NHY0 566 aa16.74■□□□□ 0.27
CIRBP-228ENST00000590347 NEUROG2Q9H2A3 272 aa16.74■□□□□ 0.27
CIRBP-228ENST00000590347 NOP53Q9NZM5 478 aaKnown RBP16.74■□□□□ 0.27
CIRBP-228ENST00000590347 PCDHGC5Q9Y5F6 944 aa16.74■□□□□ 0.27
CIRBP-228ENST00000590347 HEG1Q9ULI3 1381 aa16.73■□□□□ 0.27
CIRBP-228ENST00000590347 WDR17Q8IZU2 1322 aa16.73■□□□□ 0.27
CIRBP-228ENST00000590347 RASSF10A6NK89 507 aa16.73■□□□□ 0.27
CIRBP-228ENST00000590347 HMGB1P1B2RPK0 211 aaPredicted RBP16.73■□□□□ 0.27
CIRBP-228ENST00000590347 ADAMTS2O95450 1211 aa16.73■□□□□ 0.27
CIRBP-228ENST00000590347 SCNN1BP51168 640 aa16.73■□□□□ 0.27
CIRBP-228ENST00000590347 POLE2P56282 527 aa16.73■□□□□ 0.27
CIRBP-228ENST00000590347 TAF11Q15544 211 aa16.73■□□□□ 0.27
CIRBP-228ENST00000590347 UAP1Q16222 522 aaPredicted RBP16.73■□□□□ 0.27
CIRBP-228ENST00000590347 DNAJC7Q99615 494 aa16.73■□□□□ 0.27
CIRBP-228ENST00000590347 TLR10Q9BXR5 811 aa16.73■□□□□ 0.27
CIRBP-228ENST00000590347 AP1M1Q9BXS5 423 aa16.73■□□□□ 0.27
CIRBP-228ENST00000590347 CCDC113Q9H0I3 377 aa16.73■□□□□ 0.27
CIRBP-228ENST00000590347 LMCD1Q9NZU5 365 aa16.73■□□□□ 0.27
CIRBP-228ENST00000590347 PNMA2Q9UL42 364 aa16.73■□□□□ 0.27
CIRBP-228ENST00000590347 SLC4A4Q9Y6R1 1079 aa16.73■□□□□ 0.27
CIRBP-228ENST00000590347 CCT8L1PA6NM43 557 aa16.73■□□□□ 0.27
CIRBP-228ENST00000590347 NUTM2BA6NNL0 878 aaPredicted RBP16.73■□□□□ 0.27
CIRBP-228ENST00000590347 NUTM2EB1AL46 878 aaPredicted RBP16.73■□□□□ 0.27
CIRBP-228ENST00000590347 IFIT3O14879 490 aaKnown RBP16.73■□□□□ 0.27
CIRBP-228ENST00000590347 PPIP5K2O43314 1243 aa16.73■□□□□ 0.27
CIRBP-228ENST00000590347 MMP1P03956 469 aa16.73■□□□□ 0.27
CIRBP-228ENST00000590347 PYGBP11216 843 aa16.73■□□□□ 0.27
CIRBP-228ENST00000590347 IL2RBP14784 551 aa16.73■□□□□ 0.27
CIRBP-228ENST00000590347 ATP4AP20648 1035 aa16.73■□□□□ 0.27
CIRBP-228ENST00000590347 EIF4A3P38919 411 aaKnown RBP16.73■□□□□ 0.27
CIRBP-228ENST00000590347 PAPOLAP51003 745 aaKnown RBP16.73■□□□□ 0.27
CIRBP-228ENST00000590347 ZNF844Q08AG5 666 aa16.73■□□□□ 0.27
CIRBP-228ENST00000590347 DRP2Q13474 957 aa16.73■□□□□ 0.27
CIRBP-228ENST00000590347 NBPF5PQ86XG9 351 aaPredicted RBP16.73■□□□□ 0.27
CIRBP-228ENST00000590347 COPRSQ9NQ92 184 aa16.73■□□□□ 0.27
CIRBP-228ENST00000590347 PCDHA13Q9Y5I0 950 aa16.73■□□□□ 0.27
CIRBP-228ENST00000590347 RFX7Q2KHR2 1363 aa16.73■□□□□ 0.27
CIRBP-228ENST00000590347 VIMP08670 466 aaKnown RBP16.72■□□□□ 0.27
CIRBP-228ENST00000590347 ARID5AQ03989 594 aa16.72■□□□□ 0.27
CIRBP-228ENST00000590347 GFPT1Q06210 699 aaPredicted RBP16.72■□□□□ 0.27
CIRBP-228ENST00000590347 EHHADHQ08426 723 aa16.72■□□□□ 0.27
CIRBP-228ENST00000590347 METTL22Q9BUU2 404 aaPredicted RBP16.72■□□□□ 0.27
CIRBP-228ENST00000590347 TSGA10Q9BZW7 698 aa16.72■□□□□ 0.27
CIRBP-228ENST00000590347 MLXIPLQ9NP71 852 aa16.72■□□□□ 0.27
CIRBP-228ENST00000590347 ASAP1Q9ULH1 1129 aa16.72■□□□□ 0.27
CIRBP-228ENST00000590347 CDKL5O76039 1030 aa16.72■□□□□ 0.27
CIRBP-228ENST00000590347 DRD4P21917 467 aa16.72■□□□□ 0.27
CIRBP-228ENST00000590347 MXRA7P84157 204 aa16.72■□□□□ 0.27
CIRBP-228ENST00000590347 IFFO1Q0D2I5 559 aa16.72■□□□□ 0.27
CIRBP-228ENST00000590347 GLE1Q53GS7 698 aaKnown RBP16.72■□□□□ 0.27
CIRBP-228ENST00000590347 KANK3Q6NY19 840 aa16.72■□□□□ 0.27
CIRBP-228ENST00000590347 CNKSR2Q8WXI2 1034 aa16.72■□□□□ 0.27
CIRBP-228ENST00000590347 EPAS1Q99814 870 aa16.72■□□□□ 0.27
CIRBP-228ENST00000590347 ABCF2Q9UG63 623 aa16.72■□□□□ 0.27
CIRBP-228ENST00000590347 ZMYND8Q9ULU4 1186 aaPredicted RBP16.72■□□□□ 0.27
CIRBP-228ENST00000590347 SLC12A7Q9Y666 1083 aa16.72■□□□□ 0.27
CIRBP-228ENST00000590347 ANO9A1A5B4 782 aa16.72■□□□□ 0.27
CIRBP-228ENST00000590347 IGF2BP3O00425 579 aaKnown RBP eCLIP16.72■□□□□ 0.27
CIRBP-228ENST00000590347 SH2B2O14492 632 aaPredicted RBP16.72■□□□□ 0.27
CIRBP-228ENST00000590347 ZAP70P43403 619 aa16.72■□□□□ 0.27
CIRBP-228ENST00000590347 ICA1Q05084 483 aa16.72■□□□□ 0.27
CIRBP-228ENST00000590347 ANKRD20A2Q5SQ80 823 aa16.72■□□□□ 0.27
CIRBP-228ENST00000590347 PPP1R15BQ5SWA1 713 aa16.72■□□□□ 0.27
CIRBP-228ENST00000590347 ANKRD20A1Q5TYW2 823 aa16.72■□□□□ 0.27
CIRBP-228ENST00000590347 ANKRD20A3Q5VUR7 823 aa16.72■□□□□ 0.27
CIRBP-228ENST00000590347 PPP4R3AQ6IN85 833 aa16.72■□□□□ 0.27
CIRBP-228ENST00000590347 LONP2Q86WA8 852 aa16.72■□□□□ 0.27
CIRBP-228ENST00000590347 FNBP4Q8N3X1 1017 aaPredicted RBP16.72■□□□□ 0.27
CIRBP-228ENST00000590347 TAF1DQ9H5J8 278 aaPredicted RBP16.72■□□□□ 0.27
CIRBP-228ENST00000590347 SLC5A4Q9NY91 659 aa16.72■□□□□ 0.27
CIRBP-228ENST00000590347 FBXL5Q9UKA1 691 aa16.72■□□□□ 0.27
CIRBP-228ENST00000590347 CAPN11Q9UMQ6 739 aa16.72■□□□□ 0.27
CIRBP-228ENST00000590347 A6NNZ2 444 aa16.71■□□□□ 0.27
CIRBP-228ENST00000590347 UBOX5O94941 541 aa16.71■□□□□ 0.27
CIRBP-228ENST00000590347 PPP2R2AP63151 447 aa16.71■□□□□ 0.27
CIRBP-228ENST00000590347 TUBB8Q3ZCM7 444 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms