RNA–Protein interactions for RNA: ENST00000589781.1

APOC1-205, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 273 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-205ENST00000589781 SPECC1Q5M775 1068 aa11.6□□□□□ -0.55
APOC1-205ENST00000589781 SHC4Q6S5L8 630 aa11.6□□□□□ -0.55
APOC1-205ENST00000589781 REXO1Q8N1G1 1221 aaKnown RBP11.6□□□□□ -0.55
APOC1-205ENST00000589781 ENGASEQ8NFI3 743 aa11.6□□□□□ -0.55
APOC1-205ENST00000589781 TNMDQ9H2S6 317 aa11.6□□□□□ -0.55
APOC1-205ENST00000589781 TSPY26PQ9H489 355 aa11.6□□□□□ -0.55
APOC1-205ENST00000589781 RPAP3Q9H6T3 665 aaPredicted RBP11.6□□□□□ -0.55
APOC1-205ENST00000589781 PRR12Q9ULL5 1215 aa11.6□□□□□ -0.55
APOC1-205ENST00000589781 PLXNB2O15031 1838 aa11.6□□□□□ -0.55
APOC1-205ENST00000589781 TNRC18O15417 2968 aaPredicted RBP11.6□□□□□ -0.55
APOC1-205ENST00000589781 CENPFP49454 3210 aa11.59□□□□□ -0.55
APOC1-205ENST00000589781 USP17L15C9J2P7 530 aa11.59□□□□□ -0.55
APOC1-205ENST00000589781 USP17L13C9JLJ4 530 aa11.59□□□□□ -0.55
APOC1-205ENST00000589781 USP17L11C9JVI0 530 aa11.59□□□□□ -0.55
APOC1-205ENST00000589781 USP17L18D6R9N7 530 aa11.59□□□□□ -0.55
APOC1-205ENST00000589781 USP17L22D6RA61 530 aa11.59□□□□□ -0.55
APOC1-205ENST00000589781 USP17L17D6RBQ6 530 aa11.59□□□□□ -0.55
APOC1-205ENST00000589781 USP17L19D6RCP7 530 aa11.59□□□□□ -0.55
APOC1-205ENST00000589781 USP17L20D6RJB6 530 aa11.59□□□□□ -0.55
APOC1-205ENST00000589781 KINO60870 393 aaKnown RBP11.59□□□□□ -0.55
APOC1-205ENST00000589781 GNRH1P01148 92 aa11.59□□□□□ -0.55
APOC1-205ENST00000589781 ELNP15502 786 aa11.59□□□□□ -0.55
APOC1-205ENST00000589781 PTPREP23469 700 aa11.59□□□□□ -0.55
APOC1-205ENST00000589781 MCM7P33993 719 aa11.59□□□□□ -0.55
APOC1-205ENST00000589781 FCGRTP55899 365 aa11.59□□□□□ -0.55
APOC1-205ENST00000589781 ATP2C1P98194 919 aaPredicted RBP11.59□□□□□ -0.55
APOC1-205ENST00000589781 USP17L24Q0WX57 530 aa11.59□□□□□ -0.55
APOC1-205ENST00000589781 TRIM32Q13049 653 aa11.59□□□□□ -0.55
APOC1-205ENST00000589781 SNW1Q13573 536 aaKnown RBP11.59□□□□□ -0.55
APOC1-205ENST00000589781 KIF22Q14807 665 aa11.59□□□□□ -0.55
APOC1-205ENST00000589781 RESP18Q5W5W9 173 aa11.59□□□□□ -0.55
APOC1-205ENST00000589781 CCDC174Q6PII3 467 aa11.59□□□□□ -0.55
APOC1-205ENST00000589781 LBX2Q6XYB7 198 aa11.59□□□□□ -0.55
APOC1-205ENST00000589781 FBXO11Q86XK2 927 aa11.59□□□□□ -0.55
APOC1-205ENST00000589781 CKAP2LQ8IYA6 745 aa11.59□□□□□ -0.55
APOC1-205ENST00000589781 FMR1NBQ8N0W7 255 aaPredicted RBP11.59□□□□□ -0.55
APOC1-205ENST00000589781 USP6NLQ92738 828 aa11.59□□□□□ -0.55
APOC1-205ENST00000589781 KIFC2Q96AC6 838 aa11.59□□□□□ -0.55
APOC1-205ENST00000589781 RIC8AQ9NPQ8 531 aa11.59□□□□□ -0.55
APOC1-205ENST00000589781 FBXO28Q9NVF7 368 aa11.59□□□□□ -0.55
APOC1-205ENST00000589781 PNMA3Q9UL41 463 aa11.59□□□□□ -0.55
APOC1-205ENST00000589781 MGAMO43451 1857 aa11.59□□□□□ -0.55
APOC1-205ENST00000589781 WDR46O15213 610 aaKnown RBP11.58□□□□□ -0.56
APOC1-205ENST00000589781 BMP15O95972 392 aa11.58□□□□□ -0.56
APOC1-205ENST00000589781 CMA1P23946 247 aa11.58□□□□□ -0.56
APOC1-205ENST00000589781 GRK4P32298 578 aa11.58□□□□□ -0.56
APOC1-205ENST00000589781 PRMT2P55345 433 aa11.58□□□□□ -0.56
APOC1-205ENST00000589781 ERVK-9P63128 1117 aa11.58□□□□□ -0.56
APOC1-205ENST00000589781 ERVK-24P63145 666 aa11.58□□□□□ -0.56
APOC1-205ENST00000589781 IRX3P78415 501 aaPredicted RBP11.58□□□□□ -0.56
APOC1-205ENST00000589781 PTGDRQ13258 359 aa11.58□□□□□ -0.56
APOC1-205ENST00000589781 PABPC4Q13310 644 aaKnown RBP eCLIP11.58□□□□□ -0.562e-8■■■■■ 46.6
APOC1-205ENST00000589781 SLC9C1Q4G0N8 1177 aa11.58□□□□□ -0.56
APOC1-205ENST00000589781 L1TD1Q5T7N2 865 aaKnown RBP11.58□□□□□ -0.56
APOC1-205ENST00000589781 FAM160B2Q86V87 743 aa11.58□□□□□ -0.56
APOC1-205ENST00000589781 CUL5Q93034 780 aa11.58□□□□□ -0.56
APOC1-205ENST00000589781 FUCA2Q9BTY2 467 aa11.58□□□□□ -0.56
APOC1-205ENST00000589781 AMNQ9BXJ7 453 aa11.58□□□□□ -0.56
APOC1-205ENST00000589781 CSRNP2Q9H175 543 aa11.58□□□□□ -0.56
APOC1-205ENST00000589781 RBSNQ9H1K0 784 aa11.58□□□□□ -0.56
APOC1-205ENST00000589781 GRPEL1Q9HAV7 217 aa11.58□□□□□ -0.56
APOC1-205ENST00000589781 HPSEQ9Y251 543 aa11.58□□□□□ -0.56
APOC1-205ENST00000589781 PCDHA1Q9Y5I3 950 aa11.58□□□□□ -0.56
APOC1-205ENST00000589781 MORC2Q9Y6X9 1032 aaPredicted RBP11.58□□□□□ -0.56
APOC1-205ENST00000589781 DOCK3Q8IZD9 2030 aa11.58□□□□□ -0.56
APOC1-205ENST00000589781 TNPO2O14787 897 aaKnown RBP11.57□□□□□ -0.56
APOC1-205ENST00000589781 LETM1O95202 739 aaPredicted RBP11.57□□□□□ -0.56
APOC1-205ENST00000589781 IGHA2P01877 340 aa11.57□□□□□ -0.56
APOC1-205ENST00000589781 CLK2P49760 499 aaKnown RBP11.57□□□□□ -0.56
APOC1-205ENST00000589781 USP14P54578 494 aa11.57□□□□□ -0.56
APOC1-205ENST00000589781 IRF5Q13568 498 aa11.57□□□□□ -0.56
APOC1-205ENST00000589781 LETM2Q2VYF4 491 aa11.57□□□□□ -0.56
APOC1-205ENST00000589781 MORN1Q5T089 497 aa11.57□□□□□ -0.56
APOC1-205ENST00000589781 RBM43Q6ZSC3 357 aaKnown RBP11.57□□□□□ -0.56
APOC1-205ENST00000589781 NEK8Q86SG6 692 aa11.57□□□□□ -0.56
APOC1-205ENST00000589781 GPRC5AQ8NFJ5 357 aa11.57□□□□□ -0.56
APOC1-205ENST00000589781 TBCKQ8TEA7 893 aa11.57□□□□□ -0.56
APOC1-205ENST00000589781 PAGR1Q9BTK6 254 aa11.57□□□□□ -0.56
APOC1-205ENST00000589781 TMEM60Q9H2L4 133 aa11.57□□□□□ -0.56
APOC1-205ENST00000589781 RANBP17Q9H2T7 1088 aaKnown RBP11.57□□□□□ -0.56
APOC1-205ENST00000589781 FEM1BQ9UK73 627 aa11.57□□□□□ -0.56
APOC1-205ENST00000589781 ADAMTS5Q9UNA0 930 aa11.57□□□□□ -0.56
APOC1-205ENST00000589781 RABGAP1Q9Y3P9 1069 aa11.57□□□□□ -0.56
APOC1-205ENST00000589781 SRPRBQ9Y5M8 271 aaKnown RBP11.57□□□□□ -0.56
APOC1-205ENST00000589781 A0A0G2JMZ2 1700 aa11.56□□□□□ -0.56
APOC1-205ENST00000589781 FAM237AA0A1B0GTK4 181 aa11.56□□□□□ -0.56
APOC1-205ENST00000589781 VWA3AA6NCI4 1184 aa11.56□□□□□ -0.56
APOC1-205ENST00000589781 ADCY3O60266 1144 aa11.56□□□□□ -0.56
APOC1-205ENST00000589781 ZNF202O95125 648 aa11.56□□□□□ -0.56
APOC1-205ENST00000589781 DSG3P32926 999 aa11.56□□□□□ -0.56
APOC1-205ENST00000589781 SYKP43405 635 aa11.56□□□□□ -0.56
APOC1-205ENST00000589781 MLLT1Q03111 559 aaPredicted RBP11.56□□□□□ -0.56
APOC1-205ENST00000589781 ARHGEF6Q15052 776 aa11.56□□□□□ -0.56
APOC1-205ENST00000589781 CCL14Q16627 93 aa11.56□□□□□ -0.56
APOC1-205ENST00000589781 USP17L6PQ6QN14 398 aa11.56□□□□□ -0.56
APOC1-205ENST00000589781 USP49Q70CQ1 688 aa11.56□□□□□ -0.56
APOC1-205ENST00000589781 C4orf32Q8N8J7 132 aa11.56□□□□□ -0.56
APOC1-205ENST00000589781 REPS2Q8NFH8 660 aa11.56□□□□□ -0.56
APOC1-205ENST00000589781 CHURC1Q8WUH1 139 aa11.56□□□□□ -0.56
APOC1-205ENST00000589781 ERCC4Q92889 916 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms