RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 PNMA3Q9UL41 463 aa25.29■■□□□ 1.64
ATG4D-209ENST00000588857 MRVI1Q9Y6F6 885 aa25.29■■□□□ 1.64
ATG4D-209ENST00000588857 NEMFO60524 1076 aa25.28■■□□□ 1.64
ATG4D-209ENST00000588857 LIG1P18858 919 aa25.28■■□□□ 1.64
ATG4D-209ENST00000588857 HSD17B4P51659 736 aa25.28■■□□□ 1.64
ATG4D-209ENST00000588857 ARL6IP4Q66PJ3 421 aaKnown RBP25.28■■□□□ 1.64
ATG4D-209ENST00000588857 CLIC6Q96NY7 704 aa25.28■■□□□ 1.64
ATG4D-209ENST00000588857 RIPK3Q9Y572 518 aa25.28■■□□□ 1.64
ATG4D-209ENST00000588857 GCFC2P16383 781 aaKnown RBP25.27■■□□□ 1.64
ATG4D-209ENST00000588857 SREBF1P36956 1147 aa25.27■■□□□ 1.64
ATG4D-209ENST00000588857 ARHGAP4P98171 946 aa25.27■■□□□ 1.64
ATG4D-209ENST00000588857 PPP4R3AQ6IN85 833 aa25.27■■□□□ 1.64
ATG4D-209ENST00000588857 C4orf32Q8N8J7 132 aa25.27■■□□□ 1.64
ATG4D-209ENST00000588857 ZNF579Q8NAF0 562 aaKnown RBP25.27■■□□□ 1.64
ATG4D-209ENST00000588857 GHRHRQ02643 423 aa25.27■■□□□ 1.64
ATG4D-209ENST00000588857 SLC45A1Q9Y2W3 748 aa25.27■■□□□ 1.64
ATG4D-209ENST00000588857 TDP2O95551 362 aa25.26■■□□□ 1.63
ATG4D-209ENST00000588857 RNF207Q6ZRF8 634 aa25.26■■□□□ 1.63
ATG4D-209ENST00000588857 GOLPH3LQ9H4A5 285 aa25.26■■□□□ 1.63
ATG4D-209ENST00000588857 A0A1B0GVL5 298 aa25.25■■□□□ 1.63
ATG4D-209ENST00000588857 VWA3AA6NCI4 1184 aa25.25■■□□□ 1.63
ATG4D-209ENST00000588857 OR52Z1P0C646 297 aa25.25■■□□□ 1.63
ATG4D-209ENST00000588857 FAM160A1Q05DH4 1040 aa25.25■■□□□ 1.63
ATG4D-209ENST00000588857 RESP18Q5W5W9 173 aa25.25■■□□□ 1.63
ATG4D-209ENST00000588857 SHC4Q6S5L8 630 aa25.25■■□□□ 1.63
ATG4D-209ENST00000588857 NSMFQ6X4W1 530 aa25.25■■□□□ 1.63
ATG4D-209ENST00000588857 BRI3BPQ8WY22 251 aa25.25■■□□□ 1.63
ATG4D-209ENST00000588857 PAGR1Q9BTK6 254 aa25.25■■□□□ 1.63
ATG4D-209ENST00000588857 TMEM60Q9H2L4 133 aa25.25■■□□□ 1.63
ATG4D-209ENST00000588857 ACAD9Q9H845 621 aa25.25■■□□□ 1.63
ATG4D-209ENST00000588857 DACT1Q9NYF0 836 aa25.25■■□□□ 1.63
ATG4D-209ENST00000588857 TMEM63CQ9P1W3 806 aa25.25■■□□□ 1.63
ATG4D-209ENST00000588857 BTBD7Q9P203 1132 aa25.25■■□□□ 1.63
ATG4D-209ENST00000588857 DDX25Q9UHL0 483 aaKnown RBP25.25■■□□□ 1.63
ATG4D-209ENST00000588857 TSKSQ9UJT2 592 aa25.25■■□□□ 1.63
ATG4D-209ENST00000588857 PDHXO00330 501 aa25.24■■□□□ 1.63
ATG4D-209ENST00000588857 EDIL3O43854 480 aa25.24■■□□□ 1.63
ATG4D-209ENST00000588857 PRPHP41219 470 aa25.24■■□□□ 1.63
ATG4D-209ENST00000588857 TM4SF4P48230 202 aa25.24■■□□□ 1.63
ATG4D-209ENST00000588857 MOXD1Q6UVY6 613 aa25.24■■□□□ 1.63
ATG4D-209ENST00000588857 DTHD1Q6ZMT9 781 aa25.24■■□□□ 1.63
ATG4D-209ENST00000588857 ANKRD23Q86SG2 305 aa25.24■■□□□ 1.63
ATG4D-209ENST00000588857 CRYGNQ8WXF5 182 aa25.24■■□□□ 1.63
ATG4D-209ENST00000588857 CSRNP2Q9H175 543 aa25.24■■□□□ 1.63
ATG4D-209ENST00000588857 RNF186Q9NXI6 227 aa25.24■■□□□ 1.63
ATG4D-209ENST00000588857 SAGE1Q9NXZ1 904 aa25.24■■□□□ 1.63
ATG4D-209ENST00000588857 FAM13BQ9NYF5 915 aa25.24■■□□□ 1.63
ATG4D-209ENST00000588857 BTBD19C9JJ37 291 aa25.23■■□□□ 1.63
ATG4D-209ENST00000588857 NR1I2O75469 434 aa25.23■■□□□ 1.63
ATG4D-209ENST00000588857 RPS6P62753 249 aaKnown RBP25.23■■□□□ 1.63
ATG4D-209ENST00000588857 GRIN1Q05586 938 aa25.23■■□□□ 1.63
ATG4D-209ENST00000588857 CALCRLQ16602 461 aa25.23■■□□□ 1.63
ATG4D-209ENST00000588857 CCDC183Q5T5S1 534 aa25.23■■□□□ 1.63
ATG4D-209ENST00000588857 POTEEQ6S8J3 1075 aa25.23■■□□□ 1.63
ATG4D-209ENST00000588857 CHST13Q8NET6 341 aa25.23■■□□□ 1.63
ATG4D-209ENST00000588857 GTF3C2Q8WUA4 911 aaPredicted RBP25.23■■□□□ 1.63
ATG4D-209ENST00000588857 MAF1Q9H063 256 aa25.23■■□□□ 1.63
ATG4D-209ENST00000588857 SPATC1LQ9H0A9 340 aa25.23■■□□□ 1.63
ATG4D-209ENST00000588857 DDX19AQ9NUU7 478 aaKnown RBP25.23■■□□□ 1.63
ATG4D-209ENST00000588857 RABGAP1Q9Y3P9 1069 aa25.23■■□□□ 1.63
ATG4D-209ENST00000588857 PFKFB1P16118 471 aa25.22■■□□□ 1.63
ATG4D-209ENST00000588857 ZNF76P36508 570 aa25.22■■□□□ 1.63
ATG4D-209ENST00000588857 NDUFA8P51970 172 aa25.22■■□□□ 1.63
ATG4D-209ENST00000588857 POTEDQ86YR6 584 aa25.22■■□□□ 1.63
ATG4D-209ENST00000588857 RIOX2Q8IUF8 465 aa25.22■■□□□ 1.63
ATG4D-209ENST00000588857 SYTL5Q8TDW5 730 aaPredicted RBP25.22■■□□□ 1.63
ATG4D-209ENST00000588857 FBXO40Q9UH90 709 aa25.22■■□□□ 1.63
ATG4D-209ENST00000588857 CYP3A7-CYP3A51PA0A087WV96 503 aa25.22■■□□□ 1.63
ATG4D-209ENST00000588857 SLC37A4O43826 429 aa25.22■■□□□ 1.63
ATG4D-209ENST00000588857 TRPA1O75762 1119 aa25.22■■□□□ 1.63
ATG4D-209ENST00000588857 CYP3A4P08684 503 aa25.22■■□□□ 1.63
ATG4D-209ENST00000588857 CYP3A7P24462 503 aa25.22■■□□□ 1.63
ATG4D-209ENST00000588857 SREBF2Q12772 1141 aa25.22■■□□□ 1.63
ATG4D-209ENST00000588857 SPECC1Q5M775 1068 aa25.22■■□□□ 1.63
ATG4D-209ENST00000588857 SMCR8Q8TEV9 937 aaPredicted RBP25.22■■□□□ 1.63
ATG4D-209ENST00000588857 MARCH6O60337 910 aa25.21■■□□□ 1.63
ATG4D-209ENST00000588857 KINO60870 393 aaKnown RBP25.21■■□□□ 1.63
ATG4D-209ENST00000588857 LONP1P36776 959 aaKnown RBP25.21■■□□□ 1.63
ATG4D-209ENST00000588857 SLC30A10Q6XR72 485 aa25.21■■□□□ 1.63
ATG4D-209ENST00000588857 ENGASEQ8NFI3 743 aa25.21■■□□□ 1.63
ATG4D-209ENST00000588857 COL20A1Q9P218 1284 aa25.21■■□□□ 1.63
ATG4D-209ENST00000588857 RBPJLQ9UBG7 517 aa25.21■■□□□ 1.63
ATG4D-209ENST00000588857 FAM237AA0A1B0GTK4 181 aa25.2■■□□□ 1.62
ATG4D-209ENST00000588857 MANSC4A6NHS7 340 aaPredicted RBP25.2■■□□□ 1.62
ATG4D-209ENST00000588857 CYP2C8P10632 490 aa25.2■■□□□ 1.62
ATG4D-209ENST00000588857 CIITAP33076 1130 aa25.2■■□□□ 1.62
ATG4D-209ENST00000588857 COPB2P35606 906 aa25.2■■□□□ 1.62
ATG4D-209ENST00000588857 INHBEP58166 350 aa25.2■■□□□ 1.62
ATG4D-209ENST00000588857 SNW1Q13573 536 aaKnown RBP25.2■■□□□ 1.62
ATG4D-209ENST00000588857 BAATQ14032 418 aaPredicted RBP25.2■■□□□ 1.62
ATG4D-209ENST00000588857 IL17AQ16552 155 aa25.2■■□□□ 1.62
ATG4D-209ENST00000588857 ZSCAN23Q3MJ62 389 aa25.2■■□□□ 1.62
ATG4D-209ENST00000588857 FMR1NBQ8N0W7 255 aaPredicted RBP25.2■■□□□ 1.62
ATG4D-209ENST00000588857 MBOAT7Q96N66 472 aa25.2■■□□□ 1.62
ATG4D-209ENST00000588857 MTMR9Q96QG7 549 aa25.2■■□□□ 1.62
ATG4D-209ENST00000588857 PEX10O60683 326 aa25.19■■□□□ 1.62
ATG4D-209ENST00000588857 CNMDO75829 334 aa25.19■■□□□ 1.62
ATG4D-209ENST00000588857 SLC25A27O95847 323 aa25.19■■□□□ 1.62
ATG4D-209ENST00000588857 SYKP43405 635 aa25.19■■□□□ 1.62
ATG4D-209ENST00000588857 NCAPG2Q86XI2 1143 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms