RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 C15orf52Q6ZUT6 534 aaKnown RBP20.67■□□□□ 0.9
DDX39A-206ENST00000587730 PROM2Q8N271 834 aa20.67■□□□□ 0.9
DDX39A-206ENST00000587730 IFIH1Q9BYX4 1025 aaKnown RBP20.67■□□□□ 0.9
DDX39A-206ENST00000587730 RASSF4Q9H2L5 321 aa20.67■□□□□ 0.9
DDX39A-206ENST00000587730 FAM204AQ9H8W3 233 aa20.67■□□□□ 0.9
DDX39A-206ENST00000587730 RIC8AQ9NPQ8 531 aa20.67■□□□□ 0.9
DDX39A-206ENST00000587730 RNF14Q9UBS8 474 aa20.67■□□□□ 0.9
DDX39A-206ENST00000587730 SMCO2A6NFE2 343 aa20.66■□□□□ 0.9
DDX39A-206ENST00000587730 RASSF10A6NK89 507 aa20.66■□□□□ 0.9
DDX39A-206ENST00000587730 N4BP1O75113 896 aaKnown RBP20.66■□□□□ 0.9
DDX39A-206ENST00000587730 EVX2Q03828 476 aa20.66■□□□□ 0.9
DDX39A-206ENST00000587730 ZNF804AQ7Z570 1209 aa20.66■□□□□ 0.9
DDX39A-206ENST00000587730 SRLQ86TD4 932 aa20.66■□□□□ 0.9
DDX39A-206ENST00000587730 NEDD1Q8NHV4 660 aa20.66■□□□□ 0.9
DDX39A-206ENST00000587730 TSG101Q99816 390 aa20.66■□□□□ 0.9
DDX39A-206ENST00000587730 LACRTQ9GZZ8 138 aa20.66■□□□□ 0.9
DDX39A-206ENST00000587730 FAM107BQ9H098 131 aa20.66■□□□□ 0.9
DDX39A-206ENST00000587730 SH2D4AQ9H788 454 aa20.66■□□□□ 0.9
DDX39A-206ENST00000587730 FEZ2Q9UHY8 353 aaPredicted RBP20.66■□□□□ 0.9
DDX39A-206ENST00000587730 STX8Q9UNK0 236 aa20.66■□□□□ 0.9
DDX39A-206ENST00000587730 COL24A1Q17RW2 1714 aa20.66■□□□□ 0.9
DDX39A-206ENST00000587730 TFRCP02786 760 aaKnown RBP20.65■□□□□ 0.9
DDX39A-206ENST00000587730 RASA1P20936 1047 aa20.65■□□□□ 0.9
DDX39A-206ENST00000587730 PDIA5Q14554 519 aa20.65■□□□□ 0.9
DDX39A-206ENST00000587730 TBC1D9BQ66K14 1250 aa20.65■□□□□ 0.9
DDX39A-206ENST00000587730 REXO1Q8N1G1 1221 aaKnown RBP20.65■□□□□ 0.9
DDX39A-206ENST00000587730 RNF10Q8N5U6 811 aaKnown RBP20.65■□□□□ 0.9
DDX39A-206ENST00000587730 CDK5RAP3Q96JB5 506 aa20.65■□□□□ 0.9
DDX39A-206ENST00000587730 NDST4Q9H3R1 872 aa20.65■□□□□ 0.9
DDX39A-206ENST00000587730 HYOU1Q9Y4L1 999 aa20.65■□□□□ 0.9
DDX39A-206ENST00000587730 BRWD3Q6RI45 1802 aa20.65■□□□□ 0.9
DDX39A-206ENST00000587730 SLC26A4O43511 780 aa20.64■□□□□ 0.9
DDX39A-206ENST00000587730 GLE1Q53GS7 698 aaKnown RBP20.64■□□□□ 0.9
DDX39A-206ENST00000587730 C16orf86Q6ZW13 317 aa20.64■□□□□ 0.9
DDX39A-206ENST00000587730 LINC00116Q8NCU8 138 aa20.64■□□□□ 0.9
DDX39A-206ENST00000587730 SH3RF3Q8TEJ3 882 aaPredicted RBP20.64■□□□□ 0.9
DDX39A-206ENST00000587730 DEF6Q9H4E7 631 aa20.64■□□□□ 0.9
DDX39A-206ENST00000587730 PCDHA13Q9Y5I0 950 aa20.64■□□□□ 0.9
DDX39A-206ENST00000587730 SSU72P8A0A1W2PR75 194 aa20.64■□□□□ 0.89
DDX39A-206ENST00000587730 USP17L3A6NCW0 530 aa20.64■□□□□ 0.89
DDX39A-206ENST00000587730 USP17L4A6NCW7 530 aa20.64■□□□□ 0.89
DDX39A-206ENST00000587730 MYO1CO00159 1063 aa20.64■□□□□ 0.89
DDX39A-206ENST00000587730 PJA2O43164 708 aa20.64■□□□□ 0.89
DDX39A-206ENST00000587730 PRPF6O94906 941 aaKnown RBP20.64■□□□□ 0.89
DDX39A-206ENST00000587730 SLC35G1Q2M3R5 365 aa20.64■□□□□ 0.89
DDX39A-206ENST00000587730 GBP6Q6ZN66 633 aa20.64■□□□□ 0.89
DDX39A-206ENST00000587730 USP17L1Q7RTZ2 530 aa20.64■□□□□ 0.89
DDX39A-206ENST00000587730 SLF2Q8IX21 1173 aa20.64■□□□□ 0.89
DDX39A-206ENST00000587730 SYN2Q92777 582 aaPredicted RBP20.64■□□□□ 0.89
DDX39A-206ENST00000587730 DYNLL2Q96FJ2 89 aa20.64■□□□□ 0.89
DDX39A-206ENST00000587730 CAPZA3Q96KX2 299 aa20.64■□□□□ 0.89
DDX39A-206ENST00000587730 SIK3Q9Y2K2 1263 aa20.64■□□□□ 0.89
DDX39A-206ENST00000587730 RRP15Q9Y3B9 282 aaKnown RBP20.64■□□□□ 0.89
DDX39A-206ENST00000587730 TULP1O00294 542 aaPredicted RBP20.63■□□□□ 0.89
DDX39A-206ENST00000587730 SYF2O95926 243 aaKnown RBP20.63■□□□□ 0.89
DDX39A-206ENST00000587730 TNFRSF8P28908 595 aa20.63■□□□□ 0.89
DDX39A-206ENST00000587730 KIF11P52732 1056 aa20.63■□□□□ 0.89
DDX39A-206ENST00000587730 PPP1R18Q6NYC8 613 aa20.63■□□□□ 0.89
DDX39A-206ENST00000587730 PLIN2Q99541 437 aa20.63■□□□□ 0.89
DDX39A-206ENST00000587730 SELENOOQ9BVL4 669 aa20.63■□□□□ 0.89
DDX39A-206ENST00000587730 MACROD2A1Z1Q3 448 aa20.62■□□□□ 0.89
DDX39A-206ENST00000587730 OPA1O60313 960 aa20.62■□□□□ 0.89
DDX39A-206ENST00000587730 ZPR1O75312 459 aa20.62■□□□□ 0.89
DDX39A-206ENST00000587730 PPFIA4O75335 1185 aa20.62■□□□□ 0.89
DDX39A-206ENST00000587730 RPS6KA4O75676 772 aa20.62■□□□□ 0.89
DDX39A-206ENST00000587730 PAFAH1B1P43034 410 aa20.62■□□□□ 0.89
DDX39A-206ENST00000587730 NOVP48745 357 aa20.62■□□□□ 0.89
DDX39A-206ENST00000587730 MAPK8IP2Q13387 824 aaPredicted RBP20.62■□□□□ 0.89
DDX39A-206ENST00000587730 EMBQ6PCB8 327 aa20.62■□□□□ 0.89
DDX39A-206ENST00000587730 BICDL1Q6ZP65 573 aa20.62■□□□□ 0.89
DDX39A-206ENST00000587730 KIAA0895Q8NCT3 520 aa20.62■□□□□ 0.89
DDX39A-206ENST00000587730 AENQ8WTP8 325 aaKnown RBP20.62■□□□□ 0.89
DDX39A-206ENST00000587730 EYA3Q99504 573 aa20.62■□□□□ 0.89
DDX39A-206ENST00000587730 TMEM51Q9NW97 253 aa20.62■□□□□ 0.89
DDX39A-206ENST00000587730 LRWD1Q9UFC0 647 aa20.62■□□□□ 0.89
DDX39A-206ENST00000587730 GOLGA6BA6NDN3 693 aa20.62■□□□□ 0.89
DDX39A-206ENST00000587730 RCCD1A6NED2 376 aa20.62■□□□□ 0.89
DDX39A-206ENST00000587730 GOLGA8KD6RF30 607 aa20.62■□□□□ 0.89
DDX39A-206ENST00000587730 AKR1B10O60218 316 aa20.62■□□□□ 0.89
DDX39A-206ENST00000587730 SRGAP2O75044 1071 aa20.62■□□□□ 0.89
DDX39A-206ENST00000587730 TECP42680 631 aa20.62■□□□□ 0.89
DDX39A-206ENST00000587730 CALCRLQ16602 461 aa20.62■□□□□ 0.89
DDX39A-206ENST00000587730 CREG2Q8IUH2 290 aa20.62■□□□□ 0.89
DDX39A-206ENST00000587730 TBCKQ8TEA7 893 aa20.62■□□□□ 0.89
DDX39A-206ENST00000587730 LARP4BQ92615 738 aaKnown RBP20.62■□□□□ 0.89
DDX39A-206ENST00000587730 MTMR9Q96QG7 549 aa20.62■□□□□ 0.89
DDX39A-206ENST00000587730 NAP1L4Q99733 375 aaKnown RBP20.62■□□□□ 0.89
DDX39A-206ENST00000587730 MMTAG2Q9BU76 263 aaKnown RBP20.62■□□□□ 0.89
DDX39A-206ENST00000587730 SEMA6BQ9H3T3 888 aa20.62■□□□□ 0.89
DDX39A-206ENST00000587730 NAV1Q8NEY1 1877 aa20.61■□□□□ 0.89
DDX39A-206ENST00000587730 NNTQ13423 1086 aa20.61■□□□□ 0.89
DDX39A-206ENST00000587730 CCDC181Q5TID7 509 aa20.61■□□□□ 0.89
DDX39A-206ENST00000587730 C2CD5Q86YS7 1000 aa20.61■□□□□ 0.89
DDX39A-206ENST00000587730 FAM76AQ8TAV0 307 aa20.61■□□□□ 0.89
DDX39A-206ENST00000587730 LRRC15Q8TF66 581 aa20.61■□□□□ 0.89
DDX39A-206ENST00000587730 ZC3H4Q9UPT8 1303 aaKnown RBP20.61■□□□□ 0.89
DDX39A-206ENST00000587730 SHOX2O60902 331 aaPredicted RBP20.6■□□□□ 0.89
DDX39A-206ENST00000587730 GNA14O95837 355 aa20.6■□□□□ 0.89
DDX39A-206ENST00000587730 FCER1AP12319 257 aa20.6■□□□□ 0.89
DDX39A-206ENST00000587730 EPHB4P54760 987 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms