RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 USP17L20D6RJB6 530 aa11.56□□□□□ -0.56
APOC1-201ENST00000586638 H0YGN5 161 aa11.56□□□□□ -0.56
APOC1-201ENST00000586638 IRF6O14896 467 aa11.56□□□□□ -0.56
APOC1-201ENST00000586638 ZNF202O95125 648 aa11.56□□□□□ -0.56
APOC1-201ENST00000586638 VCAM1P19320 739 aa11.56□□□□□ -0.56
APOC1-201ENST00000586638 SYKP43405 635 aa11.56□□□□□ -0.56
APOC1-201ENST00000586638 PRMT2P55345 433 aa11.56□□□□□ -0.56
APOC1-201ENST00000586638 LACTBP83111 547 aaPredicted RBP11.56□□□□□ -0.56
APOC1-201ENST00000586638 USP17L24Q0WX57 530 aa11.56□□□□□ -0.56
APOC1-201ENST00000586638 SPP2Q13103 211 aa11.56□□□□□ -0.56
APOC1-201ENST00000586638 USP17L6PQ6QN14 398 aa11.56□□□□□ -0.56
APOC1-201ENST00000586638 USP49Q70CQ1 688 aa11.56□□□□□ -0.56
APOC1-201ENST00000586638 C4orf32Q8N8J7 132 aa11.56□□□□□ -0.56
APOC1-201ENST00000586638 CHURC1Q8WUH1 139 aa11.56□□□□□ -0.56
APOC1-201ENST00000586638 ERCC4Q92889 916 aaPredicted RBP11.56□□□□□ -0.56
APOC1-201ENST00000586638 ANO3Q9BYT9 981 aa11.56□□□□□ -0.56
APOC1-201ENST00000586638 TANGO6Q9C0B7 1094 aa11.56□□□□□ -0.56
APOC1-201ENST00000586638 RPAP3Q9H6T3 665 aaPredicted RBP11.56□□□□□ -0.56
APOC1-201ENST00000586638 PSTPIP2Q9H939 334 aa11.56□□□□□ -0.56
APOC1-201ENST00000586638 AS3MTQ9HBK9 375 aa11.56□□□□□ -0.56
APOC1-201ENST00000586638 SNCAIPQ9Y6H5 919 aa11.56□□□□□ -0.56
APOC1-201ENST00000586638 OPLAHO14841 1288 aa11.55□□□□□ -0.56
APOC1-201ENST00000586638 CCNT1O60563 726 aaKnown RBP11.55□□□□□ -0.56
APOC1-201ENST00000586638 PLA2G6O60733 806 aa11.55□□□□□ -0.56
APOC1-201ENST00000586638 TDP2O95551 362 aa11.55□□□□□ -0.56
APOC1-201ENST00000586638 HOXD10P28358 340 aa11.55□□□□□ -0.56
APOC1-201ENST00000586638 MRE11P49959 708 aa11.55□□□□□ -0.56
APOC1-201ENST00000586638 MRPL12P52815 198 aaKnown RBP11.55□□□□□ -0.56
APOC1-201ENST00000586638 USP14P54578 494 aa11.55□□□□□ -0.56
APOC1-201ENST00000586638 TYRO3Q06418 890 aa11.55□□□□□ -0.56
APOC1-201ENST00000586638 IL17AQ16552 155 aa11.55□□□□□ -0.56
APOC1-201ENST00000586638 ZNF579Q8NAF0 562 aaKnown RBP11.55□□□□□ -0.56
APOC1-201ENST00000586638 RNF214Q8ND24 703 aa11.55□□□□□ -0.56
APOC1-201ENST00000586638 LPAR1Q92633 364 aa11.55□□□□□ -0.56
APOC1-201ENST00000586638 DPF3Q92784 378 aa11.55□□□□□ -0.56
APOC1-201ENST00000586638 FERMT2Q96AC1 680 aa11.55□□□□□ -0.56
APOC1-201ENST00000586638 P2RX7Q99572 595 aaKnown RBP11.55□□□□□ -0.56
APOC1-201ENST00000586638 SLF1Q9BQI6 1058 aa11.55□□□□□ -0.56
APOC1-201ENST00000586638 WDR18Q9BV38 432 aa11.55□□□□□ -0.56
APOC1-201ENST00000586638 PANK2Q9BZ23 570 aa11.55□□□□□ -0.56
APOC1-201ENST00000586638 ARHGAP39Q9C0H5 1083 aa11.55□□□□□ -0.56
APOC1-201ENST00000586638 EMILIN3Q9NT22 766 aa11.55□□□□□ -0.56
APOC1-201ENST00000586638 FAM13BQ9NYF5 915 aa11.55□□□□□ -0.56
APOC1-201ENST00000586638 A0A087WWV3 80 aa11.54□□□□□ -0.56
APOC1-201ENST00000586638 A0A087X0B3 334 aa11.54□□□□□ -0.56
APOC1-201ENST00000586638 CTAGE5O15320 804 aa11.54□□□□□ -0.56
APOC1-201ENST00000586638 EDIL3O43854 480 aa11.54□□□□□ -0.56
APOC1-201ENST00000586638 NEMFO60524 1076 aa11.54□□□□□ -0.56
APOC1-201ENST00000586638 ECM2O94769 699 aaPredicted RBP11.54□□□□□ -0.56
APOC1-201ENST00000586638 OR52Z1P0C646 297 aa11.54□□□□□ -0.56
APOC1-201ENST00000586638 XRCC6P12956 609 aaKnown RBP eCLIP11.54□□□□□ -0.56
APOC1-201ENST00000586638 PSMC4P43686 418 aa11.54□□□□□ -0.56
APOC1-201ENST00000586638 HMGCS2P54868 508 aa11.54□□□□□ -0.56
APOC1-201ENST00000586638 PPATQ06203 517 aa11.54□□□□□ -0.56
APOC1-201ENST00000586638 PPIL2Q13356 520 aa11.54□□□□□ -0.56
APOC1-201ENST00000586638 C17orf99Q6UX52 265 aa11.54□□□□□ -0.56
APOC1-201ENST00000586638 POTEDQ86YR6 584 aa11.54□□□□□ -0.56
APOC1-201ENST00000586638 ZNF280CQ8ND82 737 aa11.54□□□□□ -0.56
APOC1-201ENST00000586638 SYMPKQ92797 1274 aaKnown RBP11.54□□□□□ -0.56
APOC1-201ENST00000586638 KCNH3Q9ULD8 1083 aa11.54□□□□□ -0.56
APOC1-201ENST00000586638 ZHX2Q9Y6X8 837 aa11.54□□□□□ -0.56
APOC1-201ENST00000586638 MEIS2O14770 477 aa11.53□□□□□ -0.56
APOC1-201ENST00000586638 SLC37A4O43826 429 aa11.53□□□□□ -0.56
APOC1-201ENST00000586638 FLOT1O75955 427 aa11.53□□□□□ -0.56
APOC1-201ENST00000586638 CCDC192P0DO97 292 aa11.53□□□□□ -0.56
APOC1-201ENST00000586638 HOXA13P31271 388 aaPredicted RBP11.53□□□□□ -0.56
APOC1-201ENST00000586638 BACE1P56817 501 aa11.53□□□□□ -0.56
APOC1-201ENST00000586638 AP3B2Q13367 1082 aa11.53□□□□□ -0.56
APOC1-201ENST00000586638 ARL6IP4Q66PJ3 421 aaKnown RBP11.53□□□□□ -0.56
APOC1-201ENST00000586638 KRBA2Q6ZNG9 492 aa11.53□□□□□ -0.56
APOC1-201ENST00000586638 PDILTQ8N807 584 aa11.53□□□□□ -0.56
APOC1-201ENST00000586638 EPSTI1Q96J88 318 aa11.53□□□□□ -0.56
APOC1-201ENST00000586638 GLT8D2Q9H1C3 349 aa11.53□□□□□ -0.56
APOC1-201ENST00000586638 SRRDQ9UH36 339 aa11.53□□□□□ -0.56
APOC1-201ENST00000586638 SERTAD1Q9UHV2 236 aa11.53□□□□□ -0.56
APOC1-201ENST00000586638 CPA4Q9UI42 421 aa11.53□□□□□ -0.56
APOC1-201ENST00000586638 CCPG1Q9ULG6 757 aa11.53□□□□□ -0.56
APOC1-201ENST00000586638 PPP1R9AQ9ULJ8 1098 aa11.53□□□□□ -0.56
APOC1-201ENST00000586638 ABCB11O95342 1321 aa11.53□□□□□ -0.56
APOC1-201ENST00000586638 HTTP42858 3142 aa11.53□□□□□ -0.56
APOC1-201ENST00000586638 PP2D1A8MPX8 630 aa11.52□□□□□ -0.57
APOC1-201ENST00000586638 PDHXO00330 501 aa11.52□□□□□ -0.57
APOC1-201ENST00000586638 POLR2DO15514 142 aaKnown RBP11.52□□□□□ -0.57
APOC1-201ENST00000586638 ACTN4O43707 911 aaKnown RBP11.52□□□□□ -0.57
APOC1-201ENST00000586638 PRR29P0C7W0 189 aa11.52□□□□□ -0.57
APOC1-201ENST00000586638 ORC2Q13416 577 aaPredicted RBP11.52□□□□□ -0.57
APOC1-201ENST00000586638 MTFR1Q15390 333 aa11.52□□□□□ -0.57
APOC1-201ENST00000586638 ANO6Q4KMQ2 910 aa11.52□□□□□ -0.57
APOC1-201ENST00000586638 SASS6Q6UVJ0 657 aa11.52□□□□□ -0.57
APOC1-201ENST00000586638 C11orf57Q6ZUT1 292 aaPredicted RBP11.52□□□□□ -0.57
APOC1-201ENST00000586638 ANKRD23Q86SG2 305 aa11.52□□□□□ -0.57
APOC1-201ENST00000586638 GRAMD1CQ8IYS0 662 aa11.52□□□□□ -0.57
APOC1-201ENST00000586638 RAET1EQ8TD07 263 aa11.52□□□□□ -0.57
APOC1-201ENST00000586638 DHX58Q96C10 678 aa11.52□□□□□ -0.57
APOC1-201ENST00000586638 ATG4CQ96DT6 458 aa11.52□□□□□ -0.57
APOC1-201ENST00000586638 C12orf42Q96LP6 360 aa11.52□□□□□ -0.57
APOC1-201ENST00000586638 AGBL1Q96MI9 1066 aa11.52□□□□□ -0.57
APOC1-201ENST00000586638 TIGD1Q96MW7 591 aa11.52□□□□□ -0.57
APOC1-201ENST00000586638 SDF4Q9BRK5 362 aa11.52□□□□□ -0.57
APOC1-201ENST00000586638 RAVER2Q9HCJ3 691 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms