RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 KRT2P35908 639 aa14.45□□□□□ -0.1
VMP1-202ENST00000585847 PRKCZQ05513 592 aa14.45□□□□□ -0.1
VMP1-202ENST00000585847 ORC2Q13416 577 aaPredicted RBP14.45□□□□□ -0.1
VMP1-202ENST00000585847 BAATQ14032 418 aaPredicted RBP14.45□□□□□ -0.1
VMP1-202ENST00000585847 WDR78Q5VTH9 848 aa14.45□□□□□ -0.1
VMP1-202ENST00000585847 MCTP1Q6DN14 999 aa14.45□□□□□ -0.1
VMP1-202ENST00000585847 PPP4R3CPQ6ZMV5 832 aa14.45□□□□□ -0.1
VMP1-202ENST00000585847 NOSTRINQ8IVI9 506 aa14.45□□□□□ -0.1
VMP1-202ENST00000585847 FAM133AQ8N9E0 248 aa14.45□□□□□ -0.1
VMP1-202ENST00000585847 KCNG4Q8TDN1 519 aa14.45□□□□□ -0.1
VMP1-202ENST00000585847 MMP19Q99542 508 aa14.45□□□□□ -0.1
VMP1-202ENST00000585847 PHF20Q9BVI0 1012 aa14.45□□□□□ -0.1
VMP1-202ENST00000585847 MAF1Q9H063 256 aa14.45□□□□□ -0.1
VMP1-202ENST00000585847 POLR3EQ9NVU0 708 aa14.45□□□□□ -0.1
VMP1-202ENST00000585847 VPS54Q9P1Q0 977 aa14.45□□□□□ -0.1
VMP1-202ENST00000585847 SRRDQ9UH36 339 aa14.45□□□□□ -0.1
VMP1-202ENST00000585847 FBXO40Q9UH90 709 aa14.45□□□□□ -0.1
VMP1-202ENST00000585847 CEP131Q9UPN4 1083 aa14.45□□□□□ -0.1
VMP1-202ENST00000585847 LRRC37A2A6NM11 1700 aa14.44□□□□□ -0.1
VMP1-202ENST00000585847 CENPFP49454 3210 aa14.44□□□□□ -0.1
VMP1-202ENST00000585847 STRNO43815 780 aa14.44□□□□□ -0.1
VMP1-202ENST00000585847 PGK2P07205 417 aa14.44□□□□□ -0.1
VMP1-202ENST00000585847 FCER1AP12319 257 aa14.44□□□□□ -0.1
VMP1-202ENST00000585847 HSD17B4P51659 736 aa14.44□□□□□ -0.1
VMP1-202ENST00000585847 UBE2HP62256 183 aa14.44□□□□□ -0.1
VMP1-202ENST00000585847 RPS6P62753 249 aaKnown RBP14.44□□□□□ -0.1
VMP1-202ENST00000585847 CNTN2Q02246 1040 aa14.44□□□□□ -0.1
VMP1-202ENST00000585847 MAP2K5Q13163 448 aa14.44□□□□□ -0.1
VMP1-202ENST00000585847 KLHL40Q2TBA0 621 aa14.44□□□□□ -0.1
VMP1-202ENST00000585847 ZNF792Q3KQV3 632 aa14.44□□□□□ -0.1
VMP1-202ENST00000585847 NSMFQ6X4W1 530 aa14.44□□□□□ -0.1
VMP1-202ENST00000585847 DIS3L2Q8IYB7 885 aaKnown RBP14.44□□□□□ -0.1
VMP1-202ENST00000585847 SYTL5Q8TDW5 730 aaPredicted RBP14.44□□□□□ -0.1
VMP1-202ENST00000585847 SYAP1Q96A49 352 aaPredicted RBP14.44□□□□□ -0.1
VMP1-202ENST00000585847 NOL7Q9UMY1 257 aaKnown RBP14.44□□□□□ -0.1
VMP1-202ENST00000585847 SOWAHBA6NEL2 793 aa14.43□□□□□ -0.1
VMP1-202ENST00000585847 HOXC6P09630 235 aa14.43□□□□□ -0.1
VMP1-202ENST00000585847 CLK2P49760 499 aaKnown RBP14.43□□□□□ -0.1
VMP1-202ENST00000585847 FLT3LGP49771 235 aa14.43□□□□□ -0.1
VMP1-202ENST00000585847 NAPAP54920 295 aa14.43□□□□□ -0.1
VMP1-202ENST00000585847 KIF22Q14807 665 aa14.43□□□□□ -0.1
VMP1-202ENST00000585847 MYSM1Q5VVJ2 828 aa14.43□□□□□ -0.1
VMP1-202ENST00000585847 NUDT12Q9BQG2 462 aa14.43□□□□□ -0.1
VMP1-202ENST00000585847 ZMYND12Q9H0C1 365 aa14.43□□□□□ -0.1
VMP1-202ENST00000585847 C6orf50Q9HD87 102 aa14.43□□□□□ -0.1
VMP1-202ENST00000585847 RTEL1Q9NZ71 1219 aa14.43□□□□□ -0.1
VMP1-202ENST00000585847 FLRT1Q9NZU1 646 aa14.43□□□□□ -0.1
VMP1-202ENST00000585847 SMCO2A6NFE2 343 aa14.42□□□□□ -0.1
VMP1-202ENST00000585847 M0R2N6 131 aa14.42□□□□□ -0.1
VMP1-202ENST00000585847 CFBP00751 764 aa14.42□□□□□ -0.1
VMP1-202ENST00000585847 GNRH1P01148 92 aa14.42□□□□□ -0.1
VMP1-202ENST00000585847 CYP2B6P20813 491 aa14.42□□□□□ -0.1
VMP1-202ENST00000585847 HOXA13P31271 388 aaPredicted RBP14.42□□□□□ -0.1
VMP1-202ENST00000585847 NASPP49321 788 aaPredicted RBP14.42□□□□□ -0.1
VMP1-202ENST00000585847 NLRP5P59047 1200 aa14.42□□□□□ -0.1
VMP1-202ENST00000585847 IRF5Q13568 498 aa14.42□□□□□ -0.1
VMP1-202ENST00000585847 KCTD2Q14681 263 aa14.42□□□□□ -0.1
VMP1-202ENST00000585847 CCL14Q16627 93 aa14.42□□□□□ -0.1
VMP1-202ENST00000585847 UBE2SQ16763 222 aa14.42□□□□□ -0.1
VMP1-202ENST00000585847 USP17L6PQ6QN14 398 aa14.42□□□□□ -0.1
VMP1-202ENST00000585847 RNF207Q6ZRF8 634 aa14.42□□□□□ -0.1
VMP1-202ENST00000585847 CCAR1Q8IX12 1150 aaKnown RBP14.42□□□□□ -0.1
VMP1-202ENST00000585847 ANKRD35Q8N283 1001 aa14.42□□□□□ -0.1
VMP1-202ENST00000585847 SOCS4Q8WXH5 440 aa14.42□□□□□ -0.1
VMP1-202ENST00000585847 ZNF333Q96JL9 665 aa14.42□□□□□ -0.1
VMP1-202ENST00000585847 SPATA32Q96LK8 384 aa14.42□□□□□ -0.1
VMP1-202ENST00000585847 TAAR1Q96RJ0 339 aa14.42□□□□□ -0.1
VMP1-202ENST00000585847 RIC8AQ9NPQ8 531 aa14.42□□□□□ -0.1
VMP1-202ENST00000585847 KCNJ14Q9UNX9 436 aa14.42□□□□□ -0.1
VMP1-202ENST00000585847 DDX49Q9Y6V7 483 aaKnown RBP14.42□□□□□ -0.1
VMP1-202ENST00000585847 IVNS1ABPQ9Y6Y0 642 aa14.42□□□□□ -0.1
VMP1-202ENST00000585847 MYH7BA7E2Y1 1941 aa14.41□□□□□ -0.1
VMP1-202ENST00000585847 MKI67P46013 3256 aaKnown RBP14.41□□□□□ -0.1
VMP1-202ENST00000585847 KIAA0100Q14667 2235 aaKnown RBP14.41□□□□□ -0.1
VMP1-202ENST00000585847 GOLGA6L4A6NEF3 574 aa14.41□□□□□ -0.1
VMP1-202ENST00000585847 PIK3CDO00329 1044 aa14.41□□□□□ -0.1
VMP1-202ENST00000585847 MYCP01106 439 aaPredicted RBP14.41□□□□□ -0.1
VMP1-202ENST00000585847 FERMT3Q86UX7 667 aa14.41□□□□□ -0.1
VMP1-202ENST00000585847 MCF2L2Q86YR7 1114 aa14.41□□□□□ -0.1
VMP1-202ENST00000585847 SAMD3Q8N6K7 520 aa14.41□□□□□ -0.1
VMP1-202ENST00000585847 MAML3Q96JK9 1138 aa14.41□□□□□ -0.1
VMP1-202ENST00000585847 NAP1L4Q99733 375 aaKnown RBP14.41□□□□□ -0.1
VMP1-202ENST00000585847 PSTPIP2Q9H939 334 aa14.41□□□□□ -0.1
VMP1-202ENST00000585847 PCDHA4Q9UN74 947 aa14.41□□□□□ -0.1
VMP1-202ENST00000585847 PTCH2Q9Y6C5 1203 aa14.41□□□□□ -0.1
VMP1-202ENST00000585847 PFASO15067 1338 aa14.41□□□□□ -0.1
VMP1-202ENST00000585847 POTEB2H3BUK9 544 aa14.4□□□□□ -0.1
VMP1-202ENST00000585847 GCOM1H8Y6P7 765 aaPredicted RBP14.4□□□□□ -0.1
VMP1-202ENST00000585847 EDIL3O43854 480 aa14.4□□□□□ -0.1
VMP1-202ENST00000585847 POLR2MP0CAP2 368 aa14.4□□□□□ -0.1
VMP1-202ENST00000585847 XRCC5P13010 732 aaKnown RBP14.4□□□□□ -0.1
VMP1-202ENST00000585847 RGS2P41220 211 aa14.4□□□□□ -0.1
VMP1-202ENST00000585847 FOSBP53539 338 aa14.4□□□□□ -0.1
VMP1-202ENST00000585847 DNM1Q05193 864 aaKnown RBP14.4□□□□□ -0.1
VMP1-202ENST00000585847 KRT25Q7Z3Z0 450 aa14.4□□□□□ -0.1
VMP1-202ENST00000585847 TRIB2Q92519 343 aa14.4□□□□□ -0.1
VMP1-202ENST00000585847 APBA2Q99767 749 aa14.4□□□□□ -0.1
VMP1-202ENST00000585847 LMBRD1Q9NUN5 540 aa14.4□□□□□ -0.1
VMP1-202ENST00000585847 TMEM260Q9NX78 707 aa14.4□□□□□ -0.1
VMP1-202ENST00000585847 MAP3K20Q9NYL2 800 aaKnown RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms