RNA–Protein interactions for RNA: ENST00000584049.5

BDNF-219, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best)

Gene BDNF, Length 4,030 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-219ENST00000584049 C2CD5Q86YS7 1000 aa9.64□□□□□ -0.87
BDNF-219ENST00000584049 IQCKQ8N0W5 287 aa9.64□□□□□ -0.87
BDNF-219ENST00000584049 EIF1ADQ8N9N8 165 aaKnown RBP9.64□□□□□ -0.87
BDNF-219ENST00000584049 PRPF38AQ8NAV1 312 aaKnown RBP9.64□□□□□ -0.87
BDNF-219ENST00000584049 KAT2BQ92831 832 aa9.64□□□□□ -0.87
BDNF-219ENST00000584049 MYCBPQ99417 103 aaPredicted RBP9.64□□□□□ -0.87
BDNF-219ENST00000584049 NUCKS1Q9H1E3 243 aaKnown RBP9.64□□□□□ -0.87
BDNF-219ENST00000584049 OR52Z1P0C646 297 aa9.64□□□□□ -0.87
BDNF-219ENST00000584049 MAGEA1P43355 309 aa9.64□□□□□ -0.87
BDNF-219ENST00000584049 STK4Q13043 487 aa9.64□□□□□ -0.87
BDNF-219ENST00000584049 ASTE1Q2TB18 679 aaPredicted RBP9.64□□□□□ -0.87
BDNF-219ENST00000584049 LRRC15Q8TF66 581 aa9.64□□□□□ -0.87
BDNF-219ENST00000584049 ARL8AQ96BM9 186 aa9.64□□□□□ -0.87
BDNF-219ENST00000584049 DRC1Q96MC2 740 aa9.64□□□□□ -0.87
BDNF-219ENST00000584049 TLR10Q9BXR5 811 aa9.64□□□□□ -0.87
BDNF-219ENST00000584049 NDST4Q9H3R1 872 aa9.64□□□□□ -0.87
BDNF-219ENST00000584049 DCP1AQ9NPI6 582 aaPredicted RBP9.64□□□□□ -0.87
BDNF-219ENST00000584049 NDUFAB1O14561 156 aa9.64□□□□□ -0.87
BDNF-219ENST00000584049 KIAA0754O94854 1291 aa9.64□□□□□ -0.87
BDNF-219ENST00000584049 PLEKP08567 350 aaPredicted RBP9.64□□□□□ -0.87
BDNF-219ENST00000584049 EVA1CP58658 441 aa9.64□□□□□ -0.87
BDNF-219ENST00000584049 KRT25Q7Z3Z0 450 aa9.64□□□□□ -0.87
BDNF-219ENST00000584049 SMCR8Q8TEV9 937 aaPredicted RBP9.64□□□□□ -0.87
BDNF-219ENST00000584049 SYN2Q92777 582 aaPredicted RBP9.64□□□□□ -0.87
BDNF-219ENST00000584049 ZIM3Q96PE6 472 aa9.64□□□□□ -0.87
BDNF-219ENST00000584049 LUC7LQ9NQ29 371 aaKnown RBP9.64□□□□□ -0.87
BDNF-219ENST00000584049 MYH10P35580 1976 aa9.64□□□□□ -0.87
BDNF-219ENST00000584049 BAZ2BQ9UIF8 2168 aaKnown RBP9.64□□□□□ -0.87
BDNF-219ENST00000584049 PVALEFA0A1B0GWK0 134 aa9.63□□□□□ -0.87
BDNF-219ENST00000584049 NTSR2O95665 410 aa9.63□□□□□ -0.87
BDNF-219ENST00000584049 HNRNPH1P31943 449 aaKnown RBP9.63□□□□□ -0.87
BDNF-219ENST00000584049 LRRC63Q05C16 580 aa9.63□□□□□ -0.87
BDNF-219ENST00000584049 CAVIN4Q5BKX8 364 aa9.63□□□□□ -0.87
BDNF-219ENST00000584049 CFAP58Q5T655 872 aa9.63□□□□□ -0.87
BDNF-219ENST00000584049 BRINP3Q76B58 766 aa9.63□□□□□ -0.87
BDNF-219ENST00000584049 WHAMMQ8TF30 809 aa9.63□□□□□ -0.87
BDNF-219ENST00000584049 LZTS2Q9BRK4 669 aa9.63□□□□□ -0.87
BDNF-219ENST00000584049 BARHL2Q9NY43 387 aa9.63□□□□□ -0.87
BDNF-219ENST00000584049 TSPY2A6NKD2 308 aa9.63□□□□□ -0.87
BDNF-219ENST00000584049 NMT2O60551 498 aa9.63□□□□□ -0.87
BDNF-219ENST00000584049 ADAMTS2O95450 1211 aa9.63□□□□□ -0.87
BDNF-219ENST00000584049 INF2Q27J81 1249 aa9.63□□□□□ -0.87
BDNF-219ENST00000584049 PDXDC1Q6P996 788 aa9.63□□□□□ -0.87
BDNF-219ENST00000584049 ZNF384Q8TF68 577 aa9.63□□□□□ -0.87
BDNF-219ENST00000584049 BAP1Q92560 729 aa9.63□□□□□ -0.87
BDNF-219ENST00000584049 EPN3Q9H201 632 aa9.63□□□□□ -0.87
BDNF-219ENST00000584049 EHD4Q9H223 541 aa9.63□□□□□ -0.87
BDNF-219ENST00000584049 A1CFQ9NQ94 594 aaKnown RBP9.63□□□□□ -0.87
BDNF-219ENST00000584049 STK17AQ9UEE5 414 aa9.63□□□□□ -0.87
BDNF-219ENST00000584049 MEFVO15553 781 aaPredicted RBP9.63□□□□□ -0.87
BDNF-219ENST00000584049 KLHDC7AQ5VTJ3 777 aa9.63□□□□□ -0.87
BDNF-219ENST00000584049 RPAINQ86UA6 219 aa9.63□□□□□ -0.87
BDNF-219ENST00000584049 GUF1Q8N442 669 aaKnown RBP9.63□□□□□ -0.87
BDNF-219ENST00000584049 KIAA0895Q8NCT3 520 aa9.63□□□□□ -0.87
BDNF-219ENST00000584049 RASGRP4Q8TDF6 673 aa9.63□□□□□ -0.87
BDNF-219ENST00000584049 GPKOWQ92917 476 aaPredicted RBP eCLIP9.63□□□□□ -0.87
BDNF-219ENST00000584049 NSUN4Q96CB9 384 aaKnown RBP9.63□□□□□ -0.87
BDNF-219ENST00000584049 SEMA6BQ9H3T3 888 aa9.63□□□□□ -0.87
BDNF-219ENST00000584049 RBM12Q9NTZ6 932 aaKnown RBP9.63□□□□□ -0.87
BDNF-219ENST00000584049 STXBP3O00186 592 aa9.62□□□□□ -0.87
BDNF-219ENST00000584049 GYG1P46976 350 aa9.62□□□□□ -0.87
BDNF-219ENST00000584049 SLC7A5Q01650 507 aa9.62□□□□□ -0.87
BDNF-219ENST00000584049 PLCB4Q15147 1175 aa9.62□□□□□ -0.87
BDNF-219ENST00000584049 FAM47AQ5JRC9 791 aa9.62□□□□□ -0.87
BDNF-219ENST00000584049 HMGB1P1B2RPK0 211 aaPredicted RBP9.62□□□□□ -0.87
BDNF-219ENST00000584049 FNTAP49354 379 aa9.62□□□□□ -0.87
BDNF-219ENST00000584049 GSCP56915 257 aaPredicted RBP9.62□□□□□ -0.87
BDNF-219ENST00000584049 PDCLQ13371 301 aa9.62□□□□□ -0.87
BDNF-219ENST00000584049 TXNRD1Q16881 649 aa9.62□□□□□ -0.87
BDNF-219ENST00000584049 KCNV1Q6PIU1 500 aa9.62□□□□□ -0.87
BDNF-219ENST00000584049 UNC13DQ70J99 1090 aa9.62□□□□□ -0.87
BDNF-219ENST00000584049 C3orf20Q8ND61 904 aa9.62□□□□□ -0.87
BDNF-219ENST00000584049 PNMA1Q8ND90 353 aa9.62□□□□□ -0.87
BDNF-219ENST00000584049 TACO1Q9BSH4 297 aaKnown RBP9.62□□□□□ -0.87
BDNF-219ENST00000584049 LRRC53A6NM62 1247 aa9.62□□□□□ -0.87
BDNF-219ENST00000584049 CES2O00748 559 aa9.62□□□□□ -0.87
BDNF-219ENST00000584049 FCER1AP12319 257 aa9.62□□□□□ -0.87
BDNF-219ENST00000584049 LSP1P33241 339 aa9.62□□□□□ -0.87
BDNF-219ENST00000584049 DDR1Q08345 913 aa9.62□□□□□ -0.87
BDNF-219ENST00000584049 DRP2Q13474 957 aa9.62□□□□□ -0.87
BDNF-219ENST00000584049 OTUD6BQ8N6M0 293 aa9.62□□□□□ -0.87
BDNF-219ENST00000584049 CALML4Q96GE6 196 aa9.62□□□□□ -0.87
BDNF-219ENST00000584049 ROBO3Q96MS0 1386 aa9.62□□□□□ -0.87
BDNF-219ENST00000584049 CAMTA2O94983 1202 aa9.61□□□□□ -0.87
BDNF-219ENST00000584049 NAP1L1P55209 391 aaKnown RBP9.61□□□□□ -0.87
BDNF-219ENST00000584049 LRIG3Q6UXM1 1119 aa9.61□□□□□ -0.87
BDNF-219ENST00000584049 PROM2Q8N271 834 aa9.61□□□□□ -0.87
BDNF-219ENST00000584049 CABS1Q96KC9 395 aa9.61□□□□□ -0.87
BDNF-219ENST00000584049 CCDC43Q96MW1 224 aaKnown RBP9.61□□□□□ -0.87
BDNF-219ENST00000584049 ZMYND12Q9H0C1 365 aa9.61□□□□□ -0.87
BDNF-219ENST00000584049 MAD2L2Q9UI95 211 aa9.61□□□□□ -0.87
BDNF-219ENST00000584049 ZNF233A6NK53 670 aa9.61□□□□□ -0.87
BDNF-219ENST00000584049 EPHB6O15197 1021 aa9.61□□□□□ -0.87
BDNF-219ENST00000584049 PPP1R37O75864 691 aa9.61□□□□□ -0.87
BDNF-219ENST00000584049 NR1D1P20393 614 aa9.61□□□□□ -0.87
BDNF-219ENST00000584049 MATR3P43243 847 aaKnown RBP eCLIP9.61□□□□□ -0.87
BDNF-219ENST00000584049 SETQ01105 290 aaPredicted RBP9.61□□□□□ -0.87
BDNF-219ENST00000584049 NONOQ15233 471 aaKnown RBP eCLIP9.61□□□□□ -0.87
BDNF-219ENST00000584049 RRAGAQ7L523 313 aa9.61□□□□□ -0.87
BDNF-219ENST00000584049 FBXO33Q7Z6M2 555 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms