RNA–Protein interactions for RNA: ENST00000583837.5

BRIP1-205, Transcript of BRCA1 interacting protein C-terminal helicase 1, human

TSL 5

Gene BRIP1, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRIP1-205	ENST00000583837	CCDC194	A0A1B0GVG4	234 aa		11.76	□□□□□ -0.53
BRIP1-205	ENST00000583837	FAM205C	A6NFA0	338 aa		11.76	□□□□□ -0.53
BRIP1-205	ENST00000583837	TNPO2	O14787	897 aa	Known RBP	11.76	□□□□□ -0.53
BRIP1-205	ENST00000583837	FARP2	O94887	1054 aa	Predicted RBP	11.76	□□□□□ -0.53
BRIP1-205	ENST00000583837	CFB	P00751	764 aa		11.76	□□□□□ -0.53
BRIP1-205	ENST00000583837	NCL	P19338	710 aa	Known RBP	11.76	□□□□□ -0.53
BRIP1-205	ENST00000583837	ATP2B1	P20020	1258 aa		11.76	□□□□□ -0.53
BRIP1-205	ENST00000583837	OAZ1	P54368	228 aa		11.76	□□□□□ -0.53
BRIP1-205	ENST00000583837	DNM1	Q05193	864 aa	Known RBP	11.76	□□□□□ -0.53
BRIP1-205	ENST00000583837	MUM1L1	Q5H9M0	696 aa		11.76	□□□□□ -0.53
BRIP1-205	ENST00000583837	EARS2	Q5JPH6	523 aa	Known RBP	11.76	□□□□□ -0.53
BRIP1-205	ENST00000583837	USP17L6P	Q6QN14	398 aa		11.76	□□□□□ -0.53
BRIP1-205	ENST00000583837	PIK3AP1	Q6ZUJ8	805 aa		11.76	□□□□□ -0.53
BRIP1-205	ENST00000583837	KRT25	Q7Z3Z0	450 aa		11.76	□□□□□ -0.53
BRIP1-205	ENST00000583837	REXO1	Q8N1G1	1221 aa	Known RBP	11.76	□□□□□ -0.53
BRIP1-205	ENST00000583837	ANKRD13C	Q8N6S4	541 aa		11.76	□□□□□ -0.53
BRIP1-205	ENST00000583837	MB21D1	Q8N884	522 aa		11.76	□□□□□ -0.53
BRIP1-205	ENST00000583837	SMCR8	Q8TEV9	937 aa	Predicted RBP	11.76	□□□□□ -0.53
BRIP1-205	ENST00000583837	GBP4	Q96PP9	640 aa		11.76	□□□□□ -0.53
BRIP1-205	ENST00000583837	RBPJL	Q9UBG7	517 aa		11.76	□□□□□ -0.53
BRIP1-205	ENST00000583837	RIPK3	Q9Y572	518 aa		11.76	□□□□□ -0.53
BRIP1-205	ENST00000583837	GCOM1	H8Y6P7	765 aa	Predicted RBP	11.75	□□□□□ -0.53
BRIP1-205	ENST00000583837		M0R2N6	131 aa		11.75	□□□□□ -0.53
BRIP1-205	ENST00000583837	ATP2A1	O14983	1001 aa		11.75	□□□□□ -0.53
BRIP1-205	ENST00000583837	CNMD	O75829	334 aa		11.75	□□□□□ -0.53
BRIP1-205	ENST00000583837	POLR2M	P0CAP2	368 aa		11.75	□□□□□ -0.53
BRIP1-205	ENST00000583837	GCLC	P48506	637 aa	Predicted RBP	11.75	□□□□□ -0.53
BRIP1-205	ENST00000583837	MNX1	P50219	401 aa	Predicted RBP	11.75	□□□□□ -0.53
BRIP1-205	ENST00000583837	CEBPZ	Q03701	1054 aa	Known RBP	11.75	□□□□□ -0.53
BRIP1-205	ENST00000583837	TKFC	Q3LXA3	575 aa		11.75	□□□□□ -0.53
BRIP1-205	ENST00000583837	MYSM1	Q5VVJ2	828 aa		11.75	□□□□□ -0.53
BRIP1-205	ENST00000583837	POTEE	Q6S8J3	1075 aa		11.75	□□□□□ -0.53
BRIP1-205	ENST00000583837	MCF2L2	Q86YR7	1114 aa		11.75	□□□□□ -0.53
BRIP1-205	ENST00000583837	RIOX2	Q8IUF8	465 aa		11.75	□□□□□ -0.53
BRIP1-205	ENST00000583837	CLEC4D	Q8WXI8	215 aa		11.75	□□□□□ -0.53
BRIP1-205	ENST00000583837	TNFRSF25	Q93038	417 aa		11.75	□□□□□ -0.53
BRIP1-205	ENST00000583837	PGBD1	Q96JS3	809 aa		11.75	□□□□□ -0.53
BRIP1-205	ENST00000583837	DEFB118	Q96PH6	123 aa		11.75	□□□□□ -0.53
BRIP1-205	ENST00000583837	TEX13B	Q9BXU2	312 aa		11.75	□□□□□ -0.53
BRIP1-205	ENST00000583837	RNF146	Q9NTX7	359 aa		11.75	□□□□□ -0.53
BRIP1-205	ENST00000583837	ZNF214	Q9UL59	606 aa	Predicted RBP	11.75	□□□□□ -0.53
BRIP1-205	ENST00000583837	NOL7	Q9UMY1	257 aa	Known RBP	11.75	□□□□□ -0.53
BRIP1-205	ENST00000583837	CNPY2	Q9Y2B0	182 aa		11.75	□□□□□ -0.53
BRIP1-205	ENST00000583837	RABGAP1	Q9Y3P9	1069 aa		11.75	□□□□□ -0.53
BRIP1-205	ENST00000583837	TCHH	Q07283	1943 aa		11.75	□□□□□ -0.53
BRIP1-205	ENST00000583837		A0A1W2PPC1	479 aa		11.74	□□□□□ -0.53
BRIP1-205	ENST00000583837	NFIB	O00712	420 aa		11.74	□□□□□ -0.53
BRIP1-205	ENST00000583837	MEIS2	O14770	477 aa		11.74	□□□□□ -0.53
BRIP1-205	ENST00000583837	OPLAH	O14841	1288 aa		11.74	□□□□□ -0.53
BRIP1-205	ENST00000583837	HOXA13	P31271	388 aa	Predicted RBP	11.74	□□□□□ -0.53
BRIP1-205	ENST00000583837	KRT85	P78386	507 aa		11.74	□□□□□ -0.53
BRIP1-205	ENST00000583837	NONO	Q15233	471 aa	Known RBP eCLIP	11.74	□□□□□ -0.53
BRIP1-205	ENST00000583837	INF2	Q27J81	1249 aa		11.74	□□□□□ -0.53
BRIP1-205	ENST00000583837		Q3C1V9	767 aa		11.74	□□□□□ -0.53
BRIP1-205	ENST00000583837	MCTP2	Q6DN12	878 aa		11.74	□□□□□ -0.53
BRIP1-205	ENST00000583837	NSMF	Q6X4W1	530 aa		11.74	□□□□□ -0.53
BRIP1-205	ENST00000583837	FCHSD1	Q86WN1	690 aa		11.74	□□□□□ -0.53
BRIP1-205	ENST00000583837	NCAPG2	Q86XI2	1143 aa		11.74	□□□□□ -0.53
BRIP1-205	ENST00000583837	GTF3C2	Q8WUA4	911 aa	Predicted RBP	11.74	□□□□□ -0.53
BRIP1-205	ENST00000583837	SPATC1L	Q9H0A9	340 aa		11.74	□□□□□ -0.53
BRIP1-205	ENST00000583837	MORF4L1	Q9UBU8	362 aa		11.74	□□□□□ -0.53
BRIP1-205	ENST00000583837	FOS	P01100	380 aa	Predicted RBP	11.73	□□□□□ -0.53
BRIP1-205	ENST00000583837	CLK2	P49760	499 aa	Known RBP	11.73	□□□□□ -0.53
BRIP1-205	ENST00000583837	TOB1	P50616	345 aa	Predicted RBP	11.73	□□□□□ -0.53
BRIP1-205	ENST00000583837	ZNF174	Q15697	407 aa		11.73	□□□□□ -0.53
BRIP1-205	ENST00000583837	RILPL1	Q5EBL4	403 aa		11.73	□□□□□ -0.53
BRIP1-205	ENST00000583837	ATL3	Q6DD88	541 aa		11.73	□□□□□ -0.53
BRIP1-205	ENST00000583837	CLEC17A	Q6ZS10	378 aa		11.73	□□□□□ -0.53
BRIP1-205	ENST00000583837	CHST13	Q8NET6	341 aa		11.73	□□□□□ -0.53
BRIP1-205	ENST00000583837	USP28	Q96RU2	1077 aa		11.73	□□□□□ -0.53
BRIP1-205	ENST00000583837	MOV10L1	Q9BXT6	1211 aa	Known RBP	11.73	□□□□□ -0.53
BRIP1-205	ENST00000583837	ANO3	Q9BYT9	981 aa		11.73	□□□□□ -0.53
BRIP1-205	ENST00000583837	ACAD9	Q9H845	621 aa		11.73	□□□□□ -0.53
BRIP1-205	ENST00000583837	GDPD2	Q9HCC8	539 aa		11.73	□□□□□ -0.53
BRIP1-205	ENST00000583837	TXNRD2	Q9NNW7	524 aa		11.73	□□□□□ -0.53
BRIP1-205	ENST00000583837	CFAP45	Q9UL16	551 aa		11.73	□□□□□ -0.53
BRIP1-205	ENST00000583837	MYH15	Q9Y2K3	1946 aa		11.73	□□□□□ -0.53
BRIP1-205	ENST00000583837	NR2E3	Q9Y5X4	410 aa		11.73	□□□□□ -0.53
BRIP1-205	ENST00000583837	CLIC4	Q9Y696	253 aa		11.73	□□□□□ -0.53
BRIP1-205	ENST00000583837	SPDYE3	A6NKU9	549 aa		11.72	□□□□□ -0.53
BRIP1-205	ENST00000583837	PIK3CD	O00329	1044 aa		11.72	□□□□□ -0.53
BRIP1-205	ENST00000583837	FIBP	O43427	364 aa		11.72	□□□□□ -0.53
BRIP1-205	ENST00000583837	SLC25A27	O95847	323 aa		11.72	□□□□□ -0.53
BRIP1-205	ENST00000583837	HMGCR	P04035	888 aa		11.72	□□□□□ -0.53
BRIP1-205	ENST00000583837	HSD17B4	P51659	736 aa		11.72	□□□□□ -0.53
BRIP1-205	ENST00000583837	ERVK-9	P63128	1117 aa		11.72	□□□□□ -0.53
BRIP1-205	ENST00000583837	ERVK-24	P63145	666 aa		11.72	□□□□□ -0.53
BRIP1-205	ENST00000583837	TRIM32	Q13049	653 aa		11.72	□□□□□ -0.53
BRIP1-205	ENST00000583837	AP3B2	Q13367	1082 aa		11.72	□□□□□ -0.53
BRIP1-205	ENST00000583837	BAAT	Q14032	418 aa	Predicted RBP	11.72	□□□□□ -0.53
BRIP1-205	ENST00000583837	NBR1	Q14596	966 aa		11.72	□□□□□ -0.53
BRIP1-205	ENST00000583837	STK38	Q15208	465 aa		11.72	□□□□□ -0.53
BRIP1-205	ENST00000583837	TTC38	Q5R3I4	469 aa		11.72	□□□□□ -0.53
BRIP1-205	ENST00000583837	MAP3K21	Q5TCX8	1036 aa		11.72	□□□□□ -0.53
BRIP1-205	ENST00000583837	WDR78	Q5VTH9	848 aa		11.72	□□□□□ -0.53
BRIP1-205	ENST00000583837	ANO1	Q5XXA6	986 aa		11.72	□□□□□ -0.53
BRIP1-205	ENST00000583837	RNF207	Q6ZRF8	634 aa		11.72	□□□□□ -0.53
BRIP1-205	ENST00000583837	ANKLE1	Q8NAG6	615 aa		11.72	□□□□□ -0.53
BRIP1-205	ENST00000583837	GPRC5A	Q8NFJ5	357 aa		11.72	□□□□□ -0.53
BRIP1-205	ENST00000583837	TBCK	Q8TEA7	893 aa		11.72	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms