RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 LILRA6Q6PI73 481 aa6.58□□□□□ -1.36
COPS3-217ENST00000583160 ZNF227Q86WZ6 799 aa6.58□□□□□ -1.36
COPS3-217ENST00000583160 NLGN1Q8N2Q7 840 aa6.58□□□□□ -1.36
COPS3-217ENST00000583160 SLC43A3Q8NBI5 491 aa6.58□□□□□ -1.36
COPS3-217ENST00000583160 NPLOC4Q8TAT6 608 aa6.58□□□□□ -1.36
COPS3-217ENST00000583160 DPF3Q92784 378 aa6.58□□□□□ -1.36
COPS3-217ENST00000583160 TSPAN17Q96FV3 270 aa6.58□□□□□ -1.36
COPS3-217ENST00000583160 KCNC2Q96PR1 638 aa6.58□□□□□ -1.36
COPS3-217ENST00000583160 MARCH2Q9P0N8 246 aa6.58□□□□□ -1.36
COPS3-217ENST00000583160 R3HCC1Q9Y3T6 440 aaKnown RBP6.58□□□□□ -1.36
COPS3-217ENST00000583160 GJB6O95452 261 aa6.57□□□□□ -1.36
COPS3-217ENST00000583160 NTRK1P04629 796 aa6.57□□□□□ -1.36
COPS3-217ENST00000583160 ASGR2P07307 311 aa6.57□□□□□ -1.36
COPS3-217ENST00000583160 SNRPB2P08579 225 aaKnown RBP6.57□□□□□ -1.36
COPS3-217ENST00000583160 ECI1P42126 302 aa6.57□□□□□ -1.36
COPS3-217ENST00000583160 IQCEQ6IPM2 695 aa6.57□□□□□ -1.36
COPS3-217ENST00000583160 PLEKHO2Q8TD55 490 aa6.57□□□□□ -1.36
COPS3-217ENST00000583160 HNRNPLLQ8WVV9 542 aaKnown RBP6.57□□□□□ -1.36
COPS3-217ENST00000583160 GMLQ99445 158 aa6.57□□□□□ -1.36
COPS3-217ENST00000583160 RNF38Q9H0F5 515 aa6.57□□□□□ -1.36
COPS3-217ENST00000583160 BTG4Q9NY30 223 aa6.57□□□□□ -1.36
COPS3-217ENST00000583160 FAN1Q9Y2M0 1017 aa6.57□□□□□ -1.36
COPS3-217ENST00000583160 ZBTB7AO95365 584 aa6.56□□□□□ -1.36
COPS3-217ENST00000583160 MC3RP41968 323 aa6.56□□□□□ -1.36
COPS3-217ENST00000583160 RBM10P98175 930 aaKnown RBP6.56□□□□□ -1.36
COPS3-217ENST00000583160 SLC9A5Q14940 896 aa6.56□□□□□ -1.36
COPS3-217ENST00000583160 EEPD1Q7L9B9 569 aa6.56□□□□□ -1.36
COPS3-217ENST00000583160 TEX2Q8IWB9 1127 aa6.56□□□□□ -1.36
COPS3-217ENST00000583160 LINC01356Q8N9X3 169 aa6.56□□□□□ -1.36
COPS3-217ENST00000583160 C20orf173Q96LM9 149 aa6.56□□□□□ -1.36
COPS3-217ENST00000583160 ST7Q9NRC1 585 aa6.56□□□□□ -1.36
COPS3-217ENST00000583160 IGSF5Q9NSI5 407 aa6.56□□□□□ -1.36
COPS3-217ENST00000583160 TMEFF2Q9UIK5 374 aaPredicted RBP6.56□□□□□ -1.36
COPS3-217ENST00000583160 SIT1Q9Y3P8 196 aa6.56□□□□□ -1.36
COPS3-217ENST00000583160 KRTAP9-7A8MTY7 169 aa6.55□□□□□ -1.36
COPS3-217ENST00000583160 ARNTLO00327 626 aa6.55□□□□□ -1.36
COPS3-217ENST00000583160 SASH1O94885 1247 aa6.55□□□□□ -1.36
COPS3-217ENST00000583160 CPP00450 1065 aa6.55□□□□□ -1.36
COPS3-217ENST00000583160 PLA2G1BP04054 148 aaKnown RBP6.55□□□□□ -1.36
COPS3-217ENST00000583160 SCG5P05408 212 aa6.55□□□□□ -1.36
COPS3-217ENST00000583160 PMLP29590 882 aa6.55□□□□□ -1.36
COPS3-217ENST00000583160 CTSWP56202 376 aa6.55□□□□□ -1.36
COPS3-217ENST00000583160 SF1Q15637 639 aaKnown RBP6.55□□□□□ -1.36
COPS3-217ENST00000583160 E4F1Q66K89 784 aaPredicted RBP6.55□□□□□ -1.36
COPS3-217ENST00000583160 ANKS3Q6ZW76 656 aa6.55□□□□□ -1.36
COPS3-217ENST00000583160 CCDC103Q8IW40 242 aa6.55□□□□□ -1.36
COPS3-217ENST00000583160 CELF2-AS1Q8N7Q2 184 aa6.55□□□□□ -1.36
COPS3-217ENST00000583160 DIO2Q92813 273 aa6.55□□□□□ -1.36
COPS3-217ENST00000583160 CCDC140Q96MF4 163 aa6.55□□□□□ -1.36
COPS3-217ENST00000583160 TIMM13Q9Y5L4 95 aaPredicted RBP6.55□□□□□ -1.36
COPS3-217ENST00000583160 PMF1-BGLAPU3KQ54 211 aa6.55□□□□□ -1.36
COPS3-217ENST00000583160 C22orf46C9J442 243 aa6.54□□□□□ -1.36
COPS3-217ENST00000583160 E9PSI1 815 aa6.54□□□□□ -1.36
COPS3-217ENST00000583160 FFAR3O14843 346 aa6.54□□□□□ -1.36
COPS3-217ENST00000583160 MEFVO15553 781 aaPredicted RBP6.54□□□□□ -1.36
COPS3-217ENST00000583160 KCNJ6P48051 423 aa6.54□□□□□ -1.36
COPS3-217ENST00000583160 CAP1Q01518 475 aa6.54□□□□□ -1.36
COPS3-217ENST00000583160 PRSS53Q2L4Q9 553 aa6.54□□□□□ -1.36
COPS3-217ENST00000583160 TP53I13Q8NBR0 393 aaPredicted RBP6.54□□□□□ -1.36
COPS3-217ENST00000583160 KREMEN2Q8NCW0 462 aa6.54□□□□□ -1.36
COPS3-217ENST00000583160 FNIP1Q8TF40 1166 aa6.54□□□□□ -1.36
COPS3-217ENST00000583160 EPN3Q9H201 632 aa6.54□□□□□ -1.36
COPS3-217ENST00000583160 GFRA1P56159 465 aa6.53□□□□□ -1.36
COPS3-217ENST00000583160 RPL11P62913 178 aaKnown RBP6.53□□□□□ -1.36
COPS3-217ENST00000583160 KCNAB2Q13303 367 aa6.53□□□□□ -1.36
COPS3-217ENST00000583160 SLC10A6Q3KNW5 377 aa6.53□□□□□ -1.36
COPS3-217ENST00000583160 CEP68Q76N32 757 aa6.53□□□□□ -1.36
COPS3-217ENST00000583160 B3GNT8Q7Z7M8 397 aa6.53□□□□□ -1.36
COPS3-217ENST00000583160 DCP2Q8IU60 420 aaKnown RBP6.53□□□□□ -1.36
COPS3-217ENST00000583160 XYLT2Q9H1B5 865 aa6.53□□□□□ -1.36
COPS3-217ENST00000583160 OTOL1A6NHN0 477 aaPredicted RBP6.52□□□□□ -1.37
COPS3-217ENST00000583160 AGRPO00253 132 aa6.52□□□□□ -1.37
COPS3-217ENST00000583160 SGSM2O43147 1006 aa6.52□□□□□ -1.37
COPS3-217ENST00000583160 KLF4O43474 513 aa6.52□□□□□ -1.37
COPS3-217ENST00000583160 FPR2P25090 351 aa6.52□□□□□ -1.37
COPS3-217ENST00000583160 BCL6P41182 706 aa6.52□□□□□ -1.37
COPS3-217ENST00000583160 GTF2A2P52657 109 aa6.52□□□□□ -1.37
COPS3-217ENST00000583160 HTRA3P83110 453 aa6.52□□□□□ -1.37
COPS3-217ENST00000583160 CACNB2Q08289 660 aaPredicted RBP6.52□□□□□ -1.37
COPS3-217ENST00000583160 DDR2Q16832 855 aa6.52□□□□□ -1.37
COPS3-217ENST00000583160 VWA3BQ502W6 1294 aa6.52□□□□□ -1.37
COPS3-217ENST00000583160 ACBD5Q5T8D3 534 aaPredicted RBP6.52□□□□□ -1.37
COPS3-217ENST00000583160 PPIL6Q8IXY8 311 aa6.52□□□□□ -1.37
COPS3-217ENST00000583160 SP8Q8IXZ3 490 aa6.52□□□□□ -1.37
COPS3-217ENST00000583160 ZDHHC14Q8IZN3 488 aa6.52□□□□□ -1.37
COPS3-217ENST00000583160 TMEM145Q8NBT3 493 aa6.52□□□□□ -1.37
COPS3-217ENST00000583160 FEZF2Q8TBJ5 459 aa6.52□□□□□ -1.37
COPS3-217ENST00000583160 CPA5Q8WXQ8 436 aa6.52□□□□□ -1.37
COPS3-217ENST00000583160 KRTAP4-7Q9BYR0 210 aa6.52□□□□□ -1.37
COPS3-217ENST00000583160 AP5M1Q9H0R1 490 aa6.52□□□□□ -1.37
COPS3-217ENST00000583160 LUC7LQ9NQ29 371 aaKnown RBP6.52□□□□□ -1.37
COPS3-217ENST00000583160 PODXL2Q9NZ53 605 aa6.52□□□□□ -1.37
COPS3-217ENST00000583160 A0A0G2JLL6 359 aaPredicted RBP6.51□□□□□ -1.37
COPS3-217ENST00000583160 A0A1W2PQU0 124 aa6.51□□□□□ -1.37
COPS3-217ENST00000583160 MYO1BO43795 1136 aa6.51□□□□□ -1.37
COPS3-217ENST00000583160 CAPNS1P04632 268 aa6.51□□□□□ -1.37
COPS3-217ENST00000583160 GRIA2P42262 883 aa6.51□□□□□ -1.37
COPS3-217ENST00000583160 PPP2R2AP63151 447 aa6.51□□□□□ -1.37
COPS3-217ENST00000583160 MROH9Q5TGP6 573 aa6.51□□□□□ -1.37
COPS3-217ENST00000583160 DENND5AQ6IQ26 1287 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms