RNA–Protein interactions for RNA: ENST00000582671.1

LIMS2-218, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 4

Gene LIMS2, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-218ENST00000582671 NSUN6Q8TEA1 469 aaKnown RBP21.71■■□□□ 1.07
LIMS2-218ENST00000582671 GLT1D1Q96MS3 346 aa21.71■■□□□ 1.07
LIMS2-218ENST00000582671 PDLIM7Q9NR12 457 aa21.71■■□□□ 1.07
LIMS2-218ENST00000582671 BRPF3Q9ULD4 1205 aa21.71■■□□□ 1.07
LIMS2-218ENST00000582671 SLC12A7Q9Y666 1083 aa21.71■■□□□ 1.07
LIMS2-218ENST00000582671 TRIM43BA6NCK2 446 aa21.7■■□□□ 1.06
LIMS2-218ENST00000582671 SLC34A2O95436 690 aa21.7■■□□□ 1.06
LIMS2-218ENST00000582671 CALM1P0DP23 149 aa21.7■■□□□ 1.06
LIMS2-218ENST00000582671 CALM2P0DP24 149 aa21.7■■□□□ 1.06
LIMS2-218ENST00000582671 CALM3P0DP25 149 aa21.7■■□□□ 1.06
LIMS2-218ENST00000582671 EIF2AK2P19525 551 aaKnown RBP21.7■■□□□ 1.06
LIMS2-218ENST00000582671 CXCL17Q6UXB2 119 aa21.7■■□□□ 1.06
LIMS2-218ENST00000582671 TRIM43Q96BQ3 446 aaPredicted RBP21.7■■□□□ 1.06
LIMS2-218ENST00000582671 PRDM5Q9NQX1 630 aaPredicted RBP21.7■■□□□ 1.06
LIMS2-218ENST00000582671 PXMP2Q9NR77 195 aa21.7■■□□□ 1.06
LIMS2-218ENST00000582671 SNX14Q9Y5W7 946 aa21.7■■□□□ 1.06
LIMS2-218ENST00000582671 ELP1O95163 1332 aa21.7■■□□□ 1.06
LIMS2-218ENST00000582671 B4DLN1 442 aa21.69■■□□□ 1.06
LIMS2-218ENST00000582671 PQBP1O60828 265 aaKnown RBP21.69■■□□□ 1.06
LIMS2-218ENST00000582671 ARIH2O95376 493 aa21.69■■□□□ 1.06
LIMS2-218ENST00000582671 CPA1P15085 419 aa21.69■■□□□ 1.06
LIMS2-218ENST00000582671 MRPL12P52815 198 aaKnown RBP21.69■■□□□ 1.06
LIMS2-218ENST00000582671 KRT32Q14532 448 aa21.69■■□□□ 1.06
LIMS2-218ENST00000582671 ARHGEF16Q5VV41 709 aa21.69■■□□□ 1.06
LIMS2-218ENST00000582671 FANCBQ8NB91 859 aa21.69■■□□□ 1.06
LIMS2-218ENST00000582671 COPS5Q92905 334 aa21.69■■□□□ 1.06
LIMS2-218ENST00000582671 LZTS2Q9BRK4 669 aa21.69■■□□□ 1.06
LIMS2-218ENST00000582671 MAP3K20Q9NYL2 800 aaKnown RBP21.69■■□□□ 1.06
LIMS2-218ENST00000582671 DOCK5Q9H7D0 1870 aa21.69■■□□□ 1.06
LIMS2-218ENST00000582671 GNAQP50148 359 aa21.68■■□□□ 1.06
LIMS2-218ENST00000582671 CDK7P50613 346 aa21.68■■□□□ 1.06
LIMS2-218ENST00000582671 ANKRD33Q7Z3H0 272 aa21.68■■□□□ 1.06
LIMS2-218ENST00000582671 MICU3Q86XE3 530 aa21.68■■□□□ 1.06
LIMS2-218ENST00000582671 SCFD2Q8WU76 684 aa21.68■■□□□ 1.06
LIMS2-218ENST00000582671 RRP36Q96EU6 259 aaKnown RBP21.68■■□□□ 1.06
LIMS2-218ENST00000582671 IWS1Q96ST2 819 aa21.68■■□□□ 1.06
LIMS2-218ENST00000582671 UBE2OQ9C0C9 1292 aaKnown RBP21.68■■□□□ 1.06
LIMS2-218ENST00000582671 PRKAG2Q9UGJ0 569 aa21.68■■□□□ 1.06
LIMS2-218ENST00000582671 SCN10AQ9Y5Y9 1956 aa21.67■■□□□ 1.06
LIMS2-218ENST00000582671 A0A1W2PPC1 479 aa21.67■■□□□ 1.06
LIMS2-218ENST00000582671 NR3C2P08235 984 aa21.67■■□□□ 1.06
LIMS2-218ENST00000582671 CLTBP09497 229 aa21.67■■□□□ 1.06
LIMS2-218ENST00000582671 TXNP10599 105 aaKnown RBP21.67■■□□□ 1.06
LIMS2-218ENST00000582671 ITGB8P26012 769 aa21.67■■□□□ 1.06
LIMS2-218ENST00000582671 FAAP100Q0VG06 881 aa21.67■■□□□ 1.06
LIMS2-218ENST00000582671 TRAF1Q13077 416 aa21.67■■□□□ 1.06
LIMS2-218ENST00000582671 PPP2R5BQ15173 497 aa21.67■■□□□ 1.06
LIMS2-218ENST00000582671 STXBP2Q15833 593 aa21.67■■□□□ 1.06
LIMS2-218ENST00000582671 CCDC62Q6P9F0 684 aa21.67■■□□□ 1.06
LIMS2-218ENST00000582671 APOA5Q6Q788 366 aa21.67■■□□□ 1.06
LIMS2-218ENST00000582671 SEPT14Q6ZU15 432 aa21.67■■□□□ 1.06
LIMS2-218ENST00000582671 TMTC3Q6ZXV5 915 aa21.67■■□□□ 1.06
LIMS2-218ENST00000582671 SAMD3Q8N6K7 520 aa21.67■■□□□ 1.06
LIMS2-218ENST00000582671 VTI1AQ96AJ9 217 aa21.67■■□□□ 1.06
LIMS2-218ENST00000582671 TOX2Q96NM4 488 aa21.67■■□□□ 1.06
LIMS2-218ENST00000582671 GRIN2DO15399 1336 aa21.66■■□□□ 1.06
LIMS2-218ENST00000582671 A0A0U1RQG5 324 aaPredicted RBP21.66■■□□□ 1.06
LIMS2-218ENST00000582671 hCG_1642624A0A1W2PR95 340 aa21.66■■□□□ 1.06
LIMS2-218ENST00000582671 GCOM1H8Y6P7 765 aaPredicted RBP21.66■■□□□ 1.06
LIMS2-218ENST00000582671 ARVCFO00192 962 aa21.66■■□□□ 1.06
LIMS2-218ENST00000582671 REC8O95072 547 aa21.66■■□□□ 1.06
LIMS2-218ENST00000582671 POLR2MP0CAP2 368 aa21.66■■□□□ 1.06
LIMS2-218ENST00000582671 CCDC82Q8N4S0 544 aa21.66■■□□□ 1.06
LIMS2-218ENST00000582671 OR6J1Q8NGC5 347 aa21.66■■□□□ 1.06
LIMS2-218ENST00000582671 JAKMIP1Q96N16 626 aaKnown RBP21.66■■□□□ 1.06
LIMS2-218ENST00000582671 PDCD2LQ9BRP1 358 aa21.66■■□□□ 1.06
LIMS2-218ENST00000582671 NKRFO15226 690 aaKnown RBP eCLIP21.65■■□□□ 1.06
LIMS2-218ENST00000582671 HMGB1P09429 215 aaKnown RBP21.65■■□□□ 1.06
LIMS2-218ENST00000582671 PSMC6P62333 389 aa21.65■■□□□ 1.06
LIMS2-218ENST00000582671 TTLL4Q14679 1199 aa21.65■■□□□ 1.06
LIMS2-218ENST00000582671 PGM5Q15124 567 aa21.65■■□□□ 1.06
LIMS2-218ENST00000582671 FCHSD1Q86WN1 690 aa21.65■■□□□ 1.06
LIMS2-218ENST00000582671 IL31RAQ8NI17 732 aa21.65■■□□□ 1.06
LIMS2-218ENST00000582671 BADQ92934 168 aa21.65■■□□□ 1.06
LIMS2-218ENST00000582671 ZFP91Q96JP5 570 aaPredicted RBP21.65■■□□□ 1.06
LIMS2-218ENST00000582671 LBHD1Q9BQE6 289 aaPredicted RBP21.65■■□□□ 1.06
LIMS2-218ENST00000582671 SOX1O00570 391 aaPredicted RBP21.64■■□□□ 1.05
LIMS2-218ENST00000582671 KIAA0355O15063 1070 aa21.64■■□□□ 1.05
LIMS2-218ENST00000582671 ZEB2O60315 1214 aa21.64■■□□□ 1.05
LIMS2-218ENST00000582671 EIF3JO75822 258 aaKnown RBP21.64■■□□□ 1.05
LIMS2-218ENST00000582671 CABYRO75952 493 aa21.64■■□□□ 1.05
LIMS2-218ENST00000582671 RGS20O76081 388 aa21.64■■□□□ 1.05
LIMS2-218ENST00000582671 MYCLP12524 364 aaPredicted RBP21.64■■□□□ 1.05
LIMS2-218ENST00000582671 LY6KQ17RY6 165 aa21.64■■□□□ 1.05
LIMS2-218ENST00000582671 SYNE3Q6ZMZ3 975 aa21.64■■□□□ 1.05
LIMS2-218ENST00000582671 FAM126BQ8IXS8 530 aa21.64■■□□□ 1.05
LIMS2-218ENST00000582671 SLC43A3Q8NBI5 491 aa21.64■■□□□ 1.05
LIMS2-218ENST00000582671 SEC63Q9UGP8 760 aaKnown RBP21.64■■□□□ 1.05
LIMS2-218ENST00000582671 RANBP2P49792 3224 aaKnown RBP21.63■■□□□ 1.05
LIMS2-218ENST00000582671 KLF18A0A0U1RQI7 1052 aa21.63■■□□□ 1.05
LIMS2-218ENST00000582671 DCDC2CA8MYV0 355 aa21.63■■□□□ 1.05
LIMS2-218ENST00000582671 ZBTB43O43298 467 aa21.63■■□□□ 1.05
LIMS2-218ENST00000582671 ITGA7Q13683 1181 aa21.63■■□□□ 1.05
LIMS2-218ENST00000582671 Q6ZUG5 572 aa21.63■■□□□ 1.05
LIMS2-218ENST00000582671 VSIG10LQ86VR7 867 aa21.63■■□□□ 1.05
LIMS2-218ENST00000582671 TDHQ8IZJ6 230 aa21.63■■□□□ 1.05
LIMS2-218ENST00000582671 FAM217BQ9NTX9 383 aaPredicted RBP21.63■■□□□ 1.05
LIMS2-218ENST00000582671 TMEM39AQ9NV64 488 aa21.63■■□□□ 1.05
LIMS2-218ENST00000582671 DDX41Q9UJV9 622 aaKnown RBP21.63■■□□□ 1.05
LIMS2-218ENST00000582671 MROH7Q68CQ1 1323 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms