RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 TPM3P06753 285 aa10.5□□□□□ -0.73
SS18-220ENST00000582092 OR52Z1P0C646 297 aa10.5□□□□□ -0.73
SS18-220ENST00000582092 SLURP2P0DP57 97 aa10.5□□□□□ -0.73
SS18-220ENST00000582092 MSNP26038 577 aaKnown RBP10.5□□□□□ -0.73
SS18-220ENST00000582092 PRPHP41219 470 aa10.5□□□□□ -0.73
SS18-220ENST00000582092 PABPC4Q13310 644 aaKnown RBP eCLIP10.5□□□□□ -0.73
SS18-220ENST00000582092 POSTNQ15063 836 aa10.5□□□□□ -0.73
SS18-220ENST00000582092 QRICH1Q2TAL8 776 aa10.5□□□□□ -0.73
SS18-220ENST00000582092 LONRF3Q496Y0 759 aa10.5□□□□□ -0.73
SS18-220ENST00000582092 FBXO46Q6PJ61 603 aaPredicted RBP10.5□□□□□ -0.73
SS18-220ENST00000582092 GADL1Q6ZQY3 521 aa10.5□□□□□ -0.73
SS18-220ENST00000582092 RASGRP2Q7LDG7 609 aa10.5□□□□□ -0.73
SS18-220ENST00000582092 LUZP1Q86V48 1076 aa10.5□□□□□ -0.73
SS18-220ENST00000582092 SPICE1Q8N0Z3 855 aa10.5□□□□□ -0.73
SS18-220ENST00000582092 FAM43AQ8N2R8 423 aa10.5□□□□□ -0.73
SS18-220ENST00000582092 SYMPKQ92797 1274 aaKnown RBP10.5□□□□□ -0.73
SS18-220ENST00000582092 SHISA4Q96DD7 197 aa10.5□□□□□ -0.73
SS18-220ENST00000582092 CDK5RAP3Q96JB5 506 aa10.5□□□□□ -0.73
SS18-220ENST00000582092 PARK7Q99497 189 aaKnown RBP10.5□□□□□ -0.73
SS18-220ENST00000582092 PNMA3Q9UL41 463 aa10.5□□□□□ -0.73
SS18-220ENST00000582092 TMX2Q9Y320 296 aa10.5□□□□□ -0.73
SS18-220ENST00000582092 TRIM17Q9Y577 477 aa10.5□□□□□ -0.73
SS18-220ENST00000582092 SPDYE3A6NKU9 549 aa10.49□□□□□ -0.73
SS18-220ENST00000582092 PDHXO00330 501 aa10.49□□□□□ -0.73
SS18-220ENST00000582092 FOSP01100 380 aaPredicted RBP10.49□□□□□ -0.73
SS18-220ENST00000582092 GNRH1P01148 92 aa10.49□□□□□ -0.73
SS18-220ENST00000582092 HOXD10P28358 340 aa10.49□□□□□ -0.73
SS18-220ENST00000582092 ZNF76P36508 570 aa10.49□□□□□ -0.73
SS18-220ENST00000582092 STAT6P42226 847 aa10.49□□□□□ -0.73
SS18-220ENST00000582092 PNOCQ13519 176 aa10.49□□□□□ -0.73
SS18-220ENST00000582092 ZYXQ15942 572 aaKnown RBP10.49□□□□□ -0.73
SS18-220ENST00000582092 CALCRLQ16602 461 aa10.49□□□□□ -0.73
SS18-220ENST00000582092 SLC35G1Q2M3R5 365 aa10.49□□□□□ -0.73
SS18-220ENST00000582092 USH1GQ495M9 461 aa10.49□□□□□ -0.73
SS18-220ENST00000582092 RRAGBQ5VZM2 374 aa10.49□□□□□ -0.73
SS18-220ENST00000582092 TYW1BQ6NUM6 668 aa10.49□□□□□ -0.73
SS18-220ENST00000582092 KIFC2Q96AC6 838 aa10.49□□□□□ -0.73
SS18-220ENST00000582092 CALML4Q96GE6 196 aa10.49□□□□□ -0.73
SS18-220ENST00000582092 EPSTI1Q96J88 318 aa10.49□□□□□ -0.73
SS18-220ENST00000582092 AK8Q96MA6 479 aa10.49□□□□□ -0.73
SS18-220ENST00000582092 NUP88Q99567 741 aaPredicted RBP10.49□□□□□ -0.73
SS18-220ENST00000582092 VCPKMTQ9H867 229 aa10.49□□□□□ -0.73
SS18-220ENST00000582092 EFCC1Q9HA90 598 aa10.49□□□□□ -0.73
SS18-220ENST00000582092 FEM1BQ9UK73 627 aa10.49□□□□□ -0.73
SS18-220ENST00000582092 SLC45A1Q9Y2W3 748 aa10.49□□□□□ -0.73
SS18-220ENST00000582092 AFG3L2Q9Y4W6 797 aa10.49□□□□□ -0.73
SS18-220ENST00000582092 A0A0G2JLL6 359 aaPredicted RBP10.48□□□□□ -0.73
SS18-220ENST00000582092 M0R2N6 131 aa10.48□□□□□ -0.73
SS18-220ENST00000582092 SLFN14P0C7P3 912 aa10.48□□□□□ -0.73
SS18-220ENST00000582092 GCFC2P16383 781 aaKnown RBP10.48□□□□□ -0.73
SS18-220ENST00000582092 AFMP43652 599 aa10.48□□□□□ -0.73
SS18-220ENST00000582092 USP14P54578 494 aa10.48□□□□□ -0.73
SS18-220ENST00000582092 HS1BP3Q53T59 392 aa10.48□□□□□ -0.73
SS18-220ENST00000582092 FAM83BQ5T0W9 1011 aa10.48□□□□□ -0.73
SS18-220ENST00000582092 ISM2Q6H9L7 571 aa10.48□□□□□ -0.73
SS18-220ENST00000582092 BTNL9Q6UXG8 535 aa10.48□□□□□ -0.73
SS18-220ENST00000582092 PRRT2Q7Z6L0 340 aaPredicted RBP10.48□□□□□ -0.73
SS18-220ENST00000582092 SIAH1Q8IUQ4 282 aa10.48□□□□□ -0.73
SS18-220ENST00000582092 TRIML1Q8N9V2 468 aa10.48□□□□□ -0.73
SS18-220ENST00000582092 PROCA1Q8NCQ7 364 aaPredicted RBP10.48□□□□□ -0.73
SS18-220ENST00000582092 ZNF280CQ8ND82 737 aa10.48□□□□□ -0.73
SS18-220ENST00000582092 ERCC4Q92889 916 aaPredicted RBP10.48□□□□□ -0.73
SS18-220ENST00000582092 MTMR8Q96EF0 704 aa10.48□□□□□ -0.73
SS18-220ENST00000582092 R3HDMLQ9H3Y0 253 aa10.48□□□□□ -0.73
SS18-220ENST00000582092 TMEM260Q9NX78 707 aa10.48□□□□□ -0.73
SS18-220ENST00000582092 TMOD4Q9NZQ9 345 aa10.48□□□□□ -0.73
SS18-220ENST00000582092 MRPL11Q9Y3B7 192 aaKnown RBP10.48□□□□□ -0.73
SS18-220ENST00000582092 SIPA1L1O43166 1804 aa10.47□□□□□ -0.73
SS18-220ENST00000582092 MGAMO43451 1857 aa10.47□□□□□ -0.73
SS18-220ENST00000582092 C19orf81C9J6K1 198 aa10.47□□□□□ -0.73
SS18-220ENST00000582092 OSBPP22059 807 aa10.47□□□□□ -0.73
SS18-220ENST00000582092 TXKP42681 527 aa10.47□□□□□ -0.73
SS18-220ENST00000582092 PRMT2P55345 433 aa10.47□□□□□ -0.73
SS18-220ENST00000582092 AMPD3Q01432 767 aa10.47□□□□□ -0.73
SS18-220ENST00000582092 GRIN1Q05586 938 aa10.47□□□□□ -0.73
SS18-220ENST00000582092 SPP2Q13103 211 aa10.47□□□□□ -0.73
SS18-220ENST00000582092 AP3B2Q13367 1082 aa10.47□□□□□ -0.73
SS18-220ENST00000582092 UBE2SQ16763 222 aa10.47□□□□□ -0.73
SS18-220ENST00000582092 SHROOM1Q2M3G4 852 aaPredicted RBP10.47□□□□□ -0.73
SS18-220ENST00000582092 C11orf57Q6ZUT1 292 aaPredicted RBP10.47□□□□□ -0.73
SS18-220ENST00000582092 TEX2Q8IWB9 1127 aa10.47□□□□□ -0.73
SS18-220ENST00000582092 AOPEPQ8N6M6 819 aa10.47□□□□□ -0.73
SS18-220ENST00000582092 MLKLQ8NB16 471 aa10.47□□□□□ -0.73
SS18-220ENST00000582092 CD99L2Q8TCZ2 262 aa10.47□□□□□ -0.73
SS18-220ENST00000582092 ACER1Q8TDN7 264 aa10.47□□□□□ -0.73
SS18-220ENST00000582092 SMCR8Q8TEV9 937 aaPredicted RBP10.47□□□□□ -0.73
SS18-220ENST00000582092 BPIFA3Q9BQP9 254 aa10.47□□□□□ -0.73
SS18-220ENST00000582092 RMND1Q9NWS8 449 aa10.47□□□□□ -0.73
SS18-220ENST00000582092 TUBE1Q9UJT0 475 aa10.47□□□□□ -0.73
SS18-220ENST00000582092 PNMA2Q9UL42 364 aa10.47□□□□□ -0.73
SS18-220ENST00000582092 PRR12Q9ULL5 1215 aa10.47□□□□□ -0.73
SS18-220ENST00000582092 PCDHA5Q9Y5H7 936 aa10.47□□□□□ -0.73
SS18-220ENST00000582092 A0A1W2PRG0 241 aa10.46□□□□□ -0.73
SS18-220ENST00000582092 PLA2G6O60733 806 aa10.46□□□□□ -0.73
SS18-220ENST00000582092 CDK11BP21127 795 aaKnown RBP10.46□□□□□ -0.73
SS18-220ENST00000582092 TECP42680 631 aa10.46□□□□□ -0.73
SS18-220ENST00000582092 USP11P51784 963 aa10.46□□□□□ -0.73
SS18-220ENST00000582092 SNAP25P60880 206 aa10.46□□□□□ -0.73
SS18-220ENST00000582092 RRP1BQ14684 758 aaKnown RBP10.46□□□□□ -0.73
SS18-220ENST00000582092 TPD52L1Q16890 204 aaPredicted RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 183.1 ms