RNA–Protein interactions for RNA: ENST00000581832.1

SMARCD2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-209ENST00000581832 CCDC62Q6P9F0 684 aa14.36□□□□□ -0.11
SMARCD2-209ENST00000581832 APOA5Q6Q788 366 aa14.36□□□□□ -0.11
SMARCD2-209ENST00000581832 NFXL1Q6ZNB6 911 aa14.36□□□□□ -0.11
SMARCD2-209ENST00000581832 RAB11FIP4Q86YS3 637 aa14.36□□□□□ -0.11
SMARCD2-209ENST00000581832 FBXL16Q8N461 479 aa14.36□□□□□ -0.11
SMARCD2-209ENST00000581832 PCSK9Q8NBP7 692 aaKnown RBP14.36□□□□□ -0.11
SMARCD2-209ENST00000581832 NSUN6Q8TEA1 469 aaKnown RBP14.36□□□□□ -0.11
SMARCD2-209ENST00000581832 IWS1Q96ST2 819 aa14.36□□□□□ -0.11
SMARCD2-209ENST00000581832 RMDN3Q96TC7 470 aa14.36□□□□□ -0.11
SMARCD2-209ENST00000581832 LZTS2Q9BRK4 669 aa14.36□□□□□ -0.11
SMARCD2-209ENST00000581832 USP26Q9BXU7 913 aa14.36□□□□□ -0.11
SMARCD2-209ENST00000581832 PXMP2Q9NR77 195 aa14.36□□□□□ -0.11
SMARCD2-209ENST00000581832 FAM217BQ9NTX9 383 aaPredicted RBP14.36□□□□□ -0.11
SMARCD2-209ENST00000581832 ATP11BQ9Y2G3 1177 aa14.36□□□□□ -0.11
SMARCD2-209ENST00000581832 SLC12A7Q9Y666 1083 aa14.36□□□□□ -0.11
SMARCD2-209ENST00000581832 SCN10AQ9Y5Y9 1956 aa14.36□□□□□ -0.11
SMARCD2-209ENST00000581832 ELP1O95163 1332 aa14.36□□□□□ -0.11
SMARCD2-209ENST00000581832 TRIM43BA6NCK2 446 aa14.35□□□□□ -0.11
SMARCD2-209ENST00000581832 RGS20O76081 388 aa14.35□□□□□ -0.11
SMARCD2-209ENST00000581832 REC8O95072 547 aa14.35□□□□□ -0.11
SMARCD2-209ENST00000581832 HMGB1P09429 215 aaKnown RBP14.35□□□□□ -0.11
SMARCD2-209ENST00000581832 HOXA13P31271 388 aaPredicted RBP14.35□□□□□ -0.11
SMARCD2-209ENST00000581832 GNAQP50148 359 aa14.35□□□□□ -0.11
SMARCD2-209ENST00000581832 FXR1P51114 621 aaKnown RBP eCLIP14.35□□□□□ -0.11
SMARCD2-209ENST00000581832 TLE2Q04725 743 aa14.35□□□□□ -0.11
SMARCD2-209ENST00000581832 PDE4DQ08499 809 aa14.35□□□□□ -0.11
SMARCD2-209ENST00000581832 TMTC3Q6ZXV5 915 aa14.35□□□□□ -0.11
SMARCD2-209ENST00000581832 ANKRD33Q7Z3H0 272 aa14.35□□□□□ -0.11
SMARCD2-209ENST00000581832 SH3RF1Q7Z6J0 888 aa14.35□□□□□ -0.11
SMARCD2-209ENST00000581832 SLC43A3Q8NBI5 491 aa14.35□□□□□ -0.11
SMARCD2-209ENST00000581832 TRIM43Q96BQ3 446 aaPredicted RBP14.35□□□□□ -0.11
SMARCD2-209ENST00000581832 TOX2Q96NM4 488 aa14.35□□□□□ -0.11
SMARCD2-209ENST00000581832 AGXT2Q9BYV1 514 aa14.35□□□□□ -0.11
SMARCD2-209ENST00000581832 SPC25Q9HBM1 224 aa14.35□□□□□ -0.11
SMARCD2-209ENST00000581832 STARD7Q9NQZ5 370 aa14.35□□□□□ -0.11
SMARCD2-209ENST00000581832 PDLIM7Q9NR12 457 aa14.35□□□□□ -0.11
SMARCD2-209ENST00000581832 GRIN2DO15399 1336 aa14.35□□□□□ -0.11
SMARCD2-209ENST00000581832 NR3C2P08235 984 aa14.34□□□□□ -0.11
SMARCD2-209ENST00000581832 EIF2AK2P19525 551 aaKnown RBP14.34□□□□□ -0.11
SMARCD2-209ENST00000581832 ITGB8P26012 769 aa14.34□□□□□ -0.11
SMARCD2-209ENST00000581832 TRAF1Q13077 416 aa14.34□□□□□ -0.11
SMARCD2-209ENST00000581832 FSCN1Q16658 493 aaKnown RBP14.34□□□□□ -0.11
SMARCD2-209ENST00000581832 NOL8Q76FK4 1167 aaKnown RBP14.34□□□□□ -0.11
SMARCD2-209ENST00000581832 MICU3Q86XE3 530 aa14.34□□□□□ -0.11
SMARCD2-209ENST00000581832 SCFD2Q8WU76 684 aa14.34□□□□□ -0.11
SMARCD2-209ENST00000581832 PIBF1Q8WXW3 757 aa14.34□□□□□ -0.11
SMARCD2-209ENST00000581832 COPS5Q92905 334 aa14.34□□□□□ -0.11
SMARCD2-209ENST00000581832 RRP36Q96EU6 259 aaKnown RBP14.34□□□□□ -0.11
SMARCD2-209ENST00000581832 PDCD2LQ9BRP1 358 aa14.34□□□□□ -0.11
SMARCD2-209ENST00000581832 A0A1W2PPC1 479 aa14.33□□□□□ -0.12
SMARCD2-209ENST00000581832 B4DLN1 442 aa14.33□□□□□ -0.12
SMARCD2-209ENST00000581832 MEIS2O14770 477 aa14.33□□□□□ -0.12
SMARCD2-209ENST00000581832 NKRFO15226 690 aaKnown RBP eCLIP14.33□□□□□ -0.12
SMARCD2-209ENST00000581832 CDC27P30260 824 aa14.33□□□□□ -0.12
SMARCD2-209ENST00000581832 MRPL12P52815 198 aaKnown RBP14.33□□□□□ -0.12
SMARCD2-209ENST00000581832 FAAP100Q0VG06 881 aa14.33□□□□□ -0.12
SMARCD2-209ENST00000581832 PGM5Q15124 567 aa14.33□□□□□ -0.12
SMARCD2-209ENST00000581832 STXBP2Q15833 593 aa14.33□□□□□ -0.12
SMARCD2-209ENST00000581832 ARHGEF16Q5VV41 709 aa14.33□□□□□ -0.12
SMARCD2-209ENST00000581832 CXCL17Q6UXB2 119 aa14.33□□□□□ -0.12
SMARCD2-209ENST00000581832 VSIG10LQ86VR7 867 aa14.33□□□□□ -0.12
SMARCD2-209ENST00000581832 IL31RAQ8NI17 732 aa14.33□□□□□ -0.12
SMARCD2-209ENST00000581832 GLT1D1Q96MS3 346 aa14.33□□□□□ -0.12
SMARCD2-209ENST00000581832 JAKMIP1Q96N16 626 aaKnown RBP14.33□□□□□ -0.12
SMARCD2-209ENST00000581832 MPHOSPH6Q99547 160 aaKnown RBP14.33□□□□□ -0.12
SMARCD2-209ENST00000581832 AP5M1Q9H0R1 490 aa14.33□□□□□ -0.12
SMARCD2-209ENST00000581832 FRMPD4Q14CM0 1322 aa14.33□□□□□ -0.12
SMARCD2-209ENST00000581832 hCG_1642624A0A1W2PR95 340 aa14.32□□□□□ -0.12
SMARCD2-209ENST00000581832 GCOM1H8Y6P7 765 aaPredicted RBP14.32□□□□□ -0.12
SMARCD2-209ENST00000581832 ARVCFO00192 962 aa14.32□□□□□ -0.12
SMARCD2-209ENST00000581832 PIK3CDO00329 1044 aa14.32□□□□□ -0.12
SMARCD2-209ENST00000581832 EIF3JO75822 258 aaKnown RBP14.32□□□□□ -0.12
SMARCD2-209ENST00000581832 POLR2MP0CAP2 368 aa14.32□□□□□ -0.12
SMARCD2-209ENST00000581832 TXNP10599 105 aaKnown RBP14.32□□□□□ -0.12
SMARCD2-209ENST00000581832 RPS6KB1P23443 525 aa14.32□□□□□ -0.12
SMARCD2-209ENST00000581832 RCAN1P53805 252 aa14.32□□□□□ -0.12
SMARCD2-209ENST00000581832 MDM2Q00987 491 aaPredicted RBP14.32□□□□□ -0.12
SMARCD2-209ENST00000581832 PPP2R5BQ15173 497 aa14.32□□□□□ -0.12
SMARCD2-209ENST00000581832 CCDC82Q8N4S0 544 aa14.32□□□□□ -0.12
SMARCD2-209ENST00000581832 CNTNAP5Q8WYK1 1306 aa14.32□□□□□ -0.12
SMARCD2-209ENST00000581832 A0A0U1RQG5 324 aaPredicted RBP14.31□□□□□ -0.12
SMARCD2-209ENST00000581832 KLF18A0A0U1RQI7 1052 aa14.31□□□□□ -0.12
SMARCD2-209ENST00000581832 A6NJR5 290 aa14.31□□□□□ -0.12
SMARCD2-209ENST00000581832 KIAA0355O15063 1070 aa14.31□□□□□ -0.12
SMARCD2-209ENST00000581832 ZBTB43O43298 467 aa14.31□□□□□ -0.12
SMARCD2-209ENST00000581832 PQBP1O60828 265 aaKnown RBP14.31□□□□□ -0.12
SMARCD2-209ENST00000581832 CABYRO75952 493 aa14.31□□□□□ -0.12
SMARCD2-209ENST00000581832 SLC34A2O95436 690 aa14.31□□□□□ -0.12
SMARCD2-209ENST00000581832 CD4P01730 458 aa14.31□□□□□ -0.12
SMARCD2-209ENST00000581832 CLTBP09497 229 aa14.31□□□□□ -0.12
SMARCD2-209ENST00000581832 EVCP57679 992 aa14.31□□□□□ -0.12
SMARCD2-209ENST00000581832 PURAQ00577 322 aaKnown RBP14.31□□□□□ -0.12
SMARCD2-209ENST00000581832 TTLL4Q14679 1199 aa14.31□□□□□ -0.12
SMARCD2-209ENST00000581832 LY6KQ17RY6 165 aa14.31□□□□□ -0.12
SMARCD2-209ENST00000581832 USP17L6PQ6QN14 398 aa14.31□□□□□ -0.12
SMARCD2-209ENST00000581832 BLOC1S2Q6QNY1 142 aa14.31□□□□□ -0.12
SMARCD2-209ENST00000581832 SEPT14Q6ZU15 432 aa14.31□□□□□ -0.12
SMARCD2-209ENST00000581832 Q6ZUG5 572 aa14.31□□□□□ -0.12
SMARCD2-209ENST00000581832 FAM126BQ8IXS8 530 aa14.31□□□□□ -0.12
SMARCD2-209ENST00000581832 OR6J1Q8NGC5 347 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms