RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 GHRHRQ02643 423 aa22.6■■□□□ 1.21
SREBF1-220ENST00000581707 KRT32Q14532 448 aa22.6■■□□□ 1.21
SREBF1-220ENST00000581707 ARHGEF16Q5VV41 709 aa22.6■■□□□ 1.21
SREBF1-220ENST00000581707 ERICH6BQ5W0A0 696 aa22.6■■□□□ 1.21
SREBF1-220ENST00000581707 ANKRD33Q7Z3H0 272 aa22.6■■□□□ 1.21
SREBF1-220ENST00000581707 SAMD3Q8N6K7 520 aa22.6■■□□□ 1.21
SREBF1-220ENST00000581707 SCFD2Q8WU76 684 aa22.6■■□□□ 1.21
SREBF1-220ENST00000581707 PIBF1Q8WXW3 757 aa22.6■■□□□ 1.21
SREBF1-220ENST00000581707 SPZ1Q9BXG8 430 aa22.6■■□□□ 1.21
SREBF1-220ENST00000581707 PDLIM7Q9NR12 457 aa22.6■■□□□ 1.21
SREBF1-220ENST00000581707 MAP3K20Q9NYL2 800 aaKnown RBP22.6■■□□□ 1.21
SREBF1-220ENST00000581707 CENPBP07199 599 aaPredicted RBP22.59■■□□□ 1.21
SREBF1-220ENST00000581707 SMARCA1P28370 1054 aa22.59■■□□□ 1.21
SREBF1-220ENST00000581707 ADCK5Q3MIX3 580 aa22.59■■□□□ 1.21
SREBF1-220ENST00000581707 CXCL17Q6UXB2 119 aa22.59■■□□□ 1.21
SREBF1-220ENST00000581707 SH3RF1Q7Z6J0 888 aa22.59■■□□□ 1.21
SREBF1-220ENST00000581707 TOX2Q96NM4 488 aa22.59■■□□□ 1.21
SREBF1-220ENST00000581707 A0A0U1RQG5 324 aaPredicted RBP22.58■■□□□ 1.21
SREBF1-220ENST00000581707 TRIM43BA6NCK2 446 aa22.58■■□□□ 1.21
SREBF1-220ENST00000581707 DCDC2CA8MYV0 355 aa22.58■■□□□ 1.21
SREBF1-220ENST00000581707 NKRFO15226 690 aaKnown RBP eCLIP22.58■■□□□ 1.21
SREBF1-220ENST00000581707 CABYRO75952 493 aa22.58■■□□□ 1.21
SREBF1-220ENST00000581707 CLTBP09497 229 aa22.58■■□□□ 1.21
SREBF1-220ENST00000581707 EIF2AK2P19525 551 aaKnown RBP22.58■■□□□ 1.21
SREBF1-220ENST00000581707 RXRAP19793 462 aa22.58■■□□□ 1.21
SREBF1-220ENST00000581707 CDK7P50613 346 aa22.58■■□□□ 1.21
SREBF1-220ENST00000581707 EXOSC10Q01780 885 aaKnown RBP22.58■■□□□ 1.21
SREBF1-220ENST00000581707 PPP2R5BQ15173 497 aa22.58■■□□□ 1.21
SREBF1-220ENST00000581707 STXBP2Q15833 593 aa22.58■■□□□ 1.21
SREBF1-220ENST00000581707 DHX32Q7L7V1 743 aaKnown RBP22.58■■□□□ 1.21
SREBF1-220ENST00000581707 SGMS1Q86VZ5 419 aa22.58■■□□□ 1.21
SREBF1-220ENST00000581707 TRIM43Q96BQ3 446 aaPredicted RBP22.58■■□□□ 1.21
SREBF1-220ENST00000581707 RRP36Q96EU6 259 aaKnown RBP22.58■■□□□ 1.21
SREBF1-220ENST00000581707 PXMP2Q9NR77 195 aa22.58■■□□□ 1.21
SREBF1-220ENST00000581707 ARVCFO00192 962 aa22.57■■□□□ 1.2
SREBF1-220ENST00000581707 HOXA13P31271 388 aaPredicted RBP22.57■■□□□ 1.2
SREBF1-220ENST00000581707 TTLL4Q14679 1199 aa22.57■■□□□ 1.2
SREBF1-220ENST00000581707 SYNE3Q6ZMZ3 975 aa22.57■■□□□ 1.2
SREBF1-220ENST00000581707 RAB11FIP4Q86YS3 637 aa22.57■■□□□ 1.2
SREBF1-220ENST00000581707 SRBD1Q8N5C6 995 aaKnown RBP22.57■■□□□ 1.2
SREBF1-220ENST00000581707 OR6J1Q8NGC5 347 aa22.57■■□□□ 1.2
SREBF1-220ENST00000581707 LTBP2Q14767 1821 aa22.57■■□□□ 1.2
SREBF1-220ENST00000581707 MROH7Q68CQ1 1323 aa22.57■■□□□ 1.2
SREBF1-220ENST00000581707 GCOM1H8Y6P7 765 aaPredicted RBP22.56■■□□□ 1.2
SREBF1-220ENST00000581707 REC8O95072 547 aa22.56■■□□□ 1.2
SREBF1-220ENST00000581707 PLEKHA8P1O95397 391 aa22.56■■□□□ 1.2
SREBF1-220ENST00000581707 NR3C2P08235 984 aa22.56■■□□□ 1.2
SREBF1-220ENST00000581707 POLR2MP0CAP2 368 aa22.56■■□□□ 1.2
SREBF1-220ENST00000581707 TXNP10599 105 aaKnown RBP22.56■■□□□ 1.2
SREBF1-220ENST00000581707 FAAP100Q0VG06 881 aa22.56■■□□□ 1.2
SREBF1-220ENST00000581707 TDHQ8IZJ6 230 aa22.56■■□□□ 1.2
SREBF1-220ENST00000581707 FANCBQ8NB91 859 aa22.56■■□□□ 1.2
SREBF1-220ENST00000581707 KCNB2Q92953 911 aa22.56■■□□□ 1.2
SREBF1-220ENST00000581707 TCEANC2Q96MN5 208 aa22.56■■□□□ 1.2
SREBF1-220ENST00000581707 TMEM39AQ9NV64 488 aa22.56■■□□□ 1.2
SREBF1-220ENST00000581707 SEC63Q9UGP8 760 aaKnown RBP22.56■■□□□ 1.2
SREBF1-220ENST00000581707 KIAA1217Q5T5P2 1943 aa22.55■■□□□ 1.2
SREBF1-220ENST00000581707 LAMA3Q16787 3333 aa22.55■■□□□ 1.2
SREBF1-220ENST00000581707 KIAA0355O15063 1070 aa22.55■■□□□ 1.2
SREBF1-220ENST00000581707 EIF3JO75822 258 aaKnown RBP22.55■■□□□ 1.2
SREBF1-220ENST00000581707 HMGB1P09429 215 aaKnown RBP22.55■■□□□ 1.2
SREBF1-220ENST00000581707 CPT1AP50416 773 aa22.55■■□□□ 1.2
SREBF1-220ENST00000581707 SEPT14Q6ZU15 432 aa22.55■■□□□ 1.2
SREBF1-220ENST00000581707 MICU3Q86XE3 530 aa22.55■■□□□ 1.2
SREBF1-220ENST00000581707 CMTR1Q8N1G2 835 aaKnown RBP22.55■■□□□ 1.2
SREBF1-220ENST00000581707 BADQ92934 168 aa22.55■■□□□ 1.2
SREBF1-220ENST00000581707 ARIH2O95376 493 aa22.54■■□□□ 1.2
SREBF1-220ENST00000581707 HSPA4P34932 840 aa22.54■■□□□ 1.2
SREBF1-220ENST00000581707 CCDC62Q6P9F0 684 aa22.54■■□□□ 1.2
SREBF1-220ENST00000581707 COPS5Q92905 334 aa22.54■■□□□ 1.2
SREBF1-220ENST00000581707 PDCD2LQ9BRP1 358 aa22.54■■□□□ 1.2
SREBF1-220ENST00000581707 POLR3EQ9NVU0 708 aa22.54■■□□□ 1.2
SREBF1-220ENST00000581707 RAG1P15918 1043 aa22.53■■□□□ 1.2
SREBF1-220ENST00000581707 ITGA7Q13683 1181 aa22.53■■□□□ 1.2
SREBF1-220ENST00000581707 BRDTQ58F21 947 aaPredicted RBP22.53■■□□□ 1.2
SREBF1-220ENST00000581707 APOA5Q6Q788 366 aa22.53■■□□□ 1.2
SREBF1-220ENST00000581707 TMTC3Q6ZXV5 915 aa22.53■■□□□ 1.2
SREBF1-220ENST00000581707 FCHSD1Q86WN1 690 aa22.53■■□□□ 1.2
SREBF1-220ENST00000581707 SLC43A3Q8NBI5 491 aa22.53■■□□□ 1.2
SREBF1-220ENST00000581707 SNX14Q9Y5W7 946 aa22.53■■□□□ 1.2
SREBF1-220ENST00000581707 SZT2Q5T011 3432 aa22.53■■□□□ 1.2
SREBF1-220ENST00000581707 MYL3P08590 195 aa22.52■■□□□ 1.2
SREBF1-220ENST00000581707 MYCLP12524 364 aaPredicted RBP22.52■■□□□ 1.2
SREBF1-220ENST00000581707 ITGB8P26012 769 aa22.52■■□□□ 1.2
SREBF1-220ENST00000581707 LY6KQ17RY6 165 aa22.52■■□□□ 1.2
SREBF1-220ENST00000581707 VSIG10LQ86VR7 867 aa22.52■■□□□ 1.2
SREBF1-220ENST00000581707 FAM126BQ8IXS8 530 aa22.52■■□□□ 1.2
SREBF1-220ENST00000581707 CCDC82Q8N4S0 544 aa22.52■■□□□ 1.2
SREBF1-220ENST00000581707 SEZ6LQ9BYH1 1024 aa22.52■■□□□ 1.2
SREBF1-220ENST00000581707 BRPF3Q9ULD4 1205 aa22.52■■□□□ 1.2
SREBF1-220ENST00000581707 GRIN2DO15399 1336 aa22.52■■□□□ 1.2
SREBF1-220ENST00000581707 A6NJR5 290 aa22.51■■□□□ 1.19
SREBF1-220ENST00000581707 TLR3O15455 904 aaKnown RBP22.51■■□□□ 1.19
SREBF1-220ENST00000581707 ZBTB43O43298 467 aa22.51■■□□□ 1.19
SREBF1-220ENST00000581707 PSMC6P62333 389 aa22.51■■□□□ 1.19
SREBF1-220ENST00000581707 FGD1P98174 961 aa22.51■■□□□ 1.19
SREBF1-220ENST00000581707 PURAQ00577 322 aaKnown RBP22.51■■□□□ 1.19
SREBF1-220ENST00000581707 PGM5Q15124 567 aa22.51■■□□□ 1.19
SREBF1-220ENST00000581707 JAKMIP1Q96N16 626 aaKnown RBP22.51■■□□□ 1.19
SREBF1-220ENST00000581707 RBM28Q9NW13 759 aaKnown RBP22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms