RNA–Protein interactions for RNA: ENST00000581487.1

CMTM4-205, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

Gene CMTM4, Length 7,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-205ENST00000581487 ARID5BQ14865 1188 aa8.1□□□□□ -1.11
CMTM4-205ENST00000581487 HHATQ5VTY9 493 aa8.1□□□□□ -1.11
CMTM4-205ENST00000581487 TEX12Q9BXU0 123 aa8.1□□□□□ -1.11
CMTM4-205ENST00000581487 TRIM31Q9BZY9 425 aa8.1□□□□□ -1.11
CMTM4-205ENST00000581487 DDX41Q9UJV9 622 aaKnown RBP8.1□□□□□ -1.11
CMTM4-205ENST00000581487 TARBP1Q13395 1621 aaKnown RBP8.1□□□□□ -1.11
CMTM4-205ENST00000581487 C6orf229H3BNL8 230 aa8.1□□□□□ -1.11
CMTM4-205ENST00000581487 ORC4O43929 436 aa8.1□□□□□ -1.11
CMTM4-205ENST00000581487 ARHGDIAP52565 204 aa8.1□□□□□ -1.11
CMTM4-205ENST00000581487 DPYDQ12882 1025 aa8.1□□□□□ -1.11
CMTM4-205ENST00000581487 ESRP1Q6NXG1 681 aaKnown RBP8.1□□□□□ -1.11
CMTM4-205ENST00000581487 GPIHBP1Q8IV16 184 aa8.1□□□□□ -1.11
CMTM4-205ENST00000581487 FBXO41Q8TF61 875 aa8.1□□□□□ -1.11
CMTM4-205ENST00000581487 CHCHD3Q9NX63 227 aaKnown RBP8.1□□□□□ -1.11
CMTM4-205ENST00000581487 TSC22D4Q9Y3Q8 395 aa8.1□□□□□ -1.11
CMTM4-205ENST00000581487 CD2APQ9Y5K6 639 aa8.1□□□□□ -1.11
CMTM4-205ENST00000581487 ZMYM6O95789 1325 aa8.1□□□□□ -1.11
CMTM4-205ENST00000581487 PHLPP2Q6ZVD8 1323 aa8.1□□□□□ -1.11
CMTM4-205ENST00000581487 SYNDIG1LA6NDD5 238 aa8.1□□□□□ -1.11
CMTM4-205ENST00000581487 BTBD18B2RXH4 712 aa8.1□□□□□ -1.11
CMTM4-205ENST00000581487 BIRC5O15392 142 aa8.1□□□□□ -1.11
CMTM4-205ENST00000581487 SARM1Q6SZW1 724 aa8.1□□□□□ -1.11
CMTM4-205ENST00000581487 RPGRQ92834 1020 aaKnown RBP8.1□□□□□ -1.11
CMTM4-205ENST00000581487 RIC8AQ9NPQ8 531 aa8.1□□□□□ -1.11
CMTM4-205ENST00000581487 B4DLN1 442 aa8.09□□□□□ -1.11
CMTM4-205ENST00000581487 ASAP2O43150 1006 aa8.09□□□□□ -1.11
CMTM4-205ENST00000581487 SLC9A1P19634 815 aa8.09□□□□□ -1.11
CMTM4-205ENST00000581487 MAN1A1P33908 653 aa8.09□□□□□ -1.11
CMTM4-205ENST00000581487 MRPL12P52815 198 aaKnown RBP8.09□□□□□ -1.11
CMTM4-205ENST00000581487 KIF23Q02241 960 aaPredicted RBP8.09□□□□□ -1.11
CMTM4-205ENST00000581487 KRT71Q3SY84 523 aa8.09□□□□□ -1.11
CMTM4-205ENST00000581487 AKNAD1Q5T1N1 836 aa8.09□□□□□ -1.11
CMTM4-205ENST00000581487 DENND2CQ68D51 928 aa8.09□□□□□ -1.11
CMTM4-205ENST00000581487 TEKT4Q8WW24 435 aa8.09□□□□□ -1.11
CMTM4-205ENST00000581487 MAIP1Q8WWC4 291 aa8.09□□□□□ -1.11
CMTM4-205ENST00000581487 HAUS4Q9H6D7 363 aa8.09□□□□□ -1.11
CMTM4-205ENST00000581487 ACTR5Q9H9F9 607 aaPredicted RBP8.09□□□□□ -1.11
CMTM4-205ENST00000581487 VPS54Q9P1Q0 977 aa8.09□□□□□ -1.11
CMTM4-205ENST00000581487 CDC23Q9UJX2 597 aa8.09□□□□□ -1.11
CMTM4-205ENST00000581487 hCG_1642624A0A1W2PR95 340 aa8.09□□□□□ -1.11
CMTM4-205ENST00000581487 HLA-DOAP06340 250 aa8.09□□□□□ -1.11
CMTM4-205ENST00000581487 SERPINB6P35237 376 aa8.09□□□□□ -1.11
CMTM4-205ENST00000581487 PTPN21Q16825 1174 aa8.09□□□□□ -1.11
CMTM4-205ENST00000581487 ZMYM1Q5SVZ6 1142 aa8.09□□□□□ -1.11
CMTM4-205ENST00000581487 CNNM4Q6P4Q7 775 aa8.09□□□□□ -1.11
CMTM4-205ENST00000581487 KLHL7Q8IXQ5 586 aa8.09□□□□□ -1.11
CMTM4-205ENST00000581487 TRIM11Q96F44 468 aa8.09□□□□□ -1.11
CMTM4-205ENST00000581487 C8orf37Q96NL8 207 aa8.09□□□□□ -1.11
CMTM4-205ENST00000581487 CTTNBP2NLQ9P2B4 639 aa8.09□□□□□ -1.11
CMTM4-205ENST00000581487 PPARGC1AQ9UBK2 798 aaKnown RBP8.09□□□□□ -1.11
CMTM4-205ENST00000581487 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.09□□□□□ -1.11
CMTM4-205ENST00000581487 KDM5AP29375 1690 aaKnown RBP8.09□□□□□ -1.11
CMTM4-205ENST00000581487 FGAP02671 866 aa8.09□□□□□ -1.11
CMTM4-205ENST00000581487 LONRF2Q1L5Z9 754 aa8.09□□□□□ -1.11
CMTM4-205ENST00000581487 SPATA1Q5VX52 437 aa8.09□□□□□ -1.11
CMTM4-205ENST00000581487 ENAHQ8N8S7 591 aaPredicted RBP8.09□□□□□ -1.11
CMTM4-205ENST00000581487 OR8K1Q8NGG5 319 aa8.09□□□□□ -1.11
CMTM4-205ENST00000581487 CFAP61Q8NHU2 1237 aa8.09□□□□□ -1.11
CMTM4-205ENST00000581487 PSMB7Q99436 277 aa8.09□□□□□ -1.11
CMTM4-205ENST00000581487 IARS2Q9NSE4 1012 aaKnown RBP8.09□□□□□ -1.11
CMTM4-205ENST00000581487 DONSONQ9NYP3 566 aa8.09□□□□□ -1.11
CMTM4-205ENST00000581487 HYOU1Q9Y4L1 999 aa8.09□□□□□ -1.11
CMTM4-205ENST00000581487 KCNJ18B7U540 433 aa8.09□□□□□ -1.11
CMTM4-205ENST00000581487 SLC12A2P55011 1212 aa8.09□□□□□ -1.11
CMTM4-205ENST00000581487 MTMR3Q13615 1198 aa8.09□□□□□ -1.11
CMTM4-205ENST00000581487 PTK2BQ14289 1009 aa8.09□□□□□ -1.11
CMTM4-205ENST00000581487 KCNJ12Q14500 433 aa8.09□□□□□ -1.11
CMTM4-205ENST00000581487 C16orf87Q6PH81 154 aa8.09□□□□□ -1.11
CMTM4-205ENST00000581487 MFN1Q8IWA4 741 aa8.09□□□□□ -1.11
CMTM4-205ENST00000581487 CENPSQ8N2Z9 138 aa8.09□□□□□ -1.11
CMTM4-205ENST00000581487 SPATA5Q8NB90 893 aa8.09□□□□□ -1.11
CMTM4-205ENST00000581487 CCDC197Q8NCU1 140 aa8.09□□□□□ -1.11
CMTM4-205ENST00000581487 FLCNQ8NFG4 579 aa8.09□□□□□ -1.11
CMTM4-205ENST00000581487 ASZ1Q8WWH4 475 aa8.09□□□□□ -1.11
CMTM4-205ENST00000581487 LPIN2Q92539 896 aa8.09□□□□□ -1.11
CMTM4-205ENST00000581487 RIOK1Q9BRS2 568 aaKnown RBP8.09□□□□□ -1.11
CMTM4-205ENST00000581487 FAM167BQ9BTA0 163 aa8.09□□□□□ -1.11
CMTM4-205ENST00000581487 SYNCRIPO60506 623 aaKnown RBP8.09□□□□□ -1.11
CMTM4-205ENST00000581487 PARP10Q53GL7 1025 aa8.09□□□□□ -1.11
CMTM4-205ENST00000581487 KCTD16Q68DU8 428 aa8.09□□□□□ -1.11
CMTM4-205ENST00000581487 RILPQ96NA2 401 aa8.09□□□□□ -1.11
CMTM4-205ENST00000581487 GPHNQ9NQX3 736 aaPredicted RBP8.09□□□□□ -1.11
CMTM4-205ENST00000581487 NOP53Q9NZM5 478 aaKnown RBP8.09□□□□□ -1.11
CMTM4-205ENST00000581487 FOXD4Q12950 439 aaPredicted RBP8.09□□□□□ -1.12
CMTM4-205ENST00000581487 LRRC24Q50LG9 513 aa8.09□□□□□ -1.12
CMTM4-205ENST00000581487 PLEKHM3Q6ZWE6 761 aa8.09□□□□□ -1.12
CMTM4-205ENST00000581487 ST13P4Q8IZP2 240 aaPredicted RBP8.09□□□□□ -1.12
CMTM4-205ENST00000581487 ZNF277Q9NRM2 450 aaPredicted RBP8.09□□□□□ -1.12
CMTM4-205ENST00000581487 BCAP29Q9UHQ4 241 aa8.09□□□□□ -1.12
CMTM4-205ENST00000581487 NVLO15381 856 aaKnown RBP8.08□□□□□ -1.12
CMTM4-205ENST00000581487 CCDC159P0C7I6 412 aa8.08□□□□□ -1.12
CMTM4-205ENST00000581487 WASHC5Q12768 1159 aa8.08□□□□□ -1.12
CMTM4-205ENST00000581487 VSTM4Q8IW00 320 aa8.08□□□□□ -1.12
CMTM4-205ENST00000581487 ACSBG1Q96GR2 724 aa8.08□□□□□ -1.12
CMTM4-205ENST00000581487 POLR3CQ9BUI4 534 aaPredicted RBP8.08□□□□□ -1.12
CMTM4-205ENST00000581487 TTLL3Q9Y4R7 772 aa8.08□□□□□ -1.12
CMTM4-205ENST00000581487 CASP14P31944 242 aa8.08□□□□□ -1.12
CMTM4-205ENST00000581487 CTNNA1P35221 906 aaKnown RBP8.08□□□□□ -1.12
CMTM4-205ENST00000581487 CCDC144BQ3MJ40 725 aa8.08□□□□□ -1.12
CMTM4-205ENST00000581487 NBPF14Q5TI25 921 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms