RNA–Protein interactions for RNA: ENST00000581224.5

TRIM16-222, Transcript of tripartite motif containing 16, human

TSL 3

Gene TRIM16, Length 815 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM16-222	ENST00000581224	USP49	Q70CQ1	688 aa		11.16	□□□□□ -0.62
TRIM16-222	ENST00000581224	USP50	Q70EL3	339 aa	Predicted RBP	11.16	□□□□□ -0.62
TRIM16-222	ENST00000581224	RASGRP2	Q7LDG7	609 aa		11.16	□□□□□ -0.62
TRIM16-222	ENST00000581224	KRT26	Q7Z3Y9	468 aa		11.16	□□□□□ -0.62
TRIM16-222	ENST00000581224	TRPM4	Q8TD43	1214 aa		11.16	□□□□□ -0.62
TRIM16-222	ENST00000581224	ACER1	Q8TDN7	264 aa		11.16	□□□□□ -0.62
TRIM16-222	ENST00000581224	DCPS	Q96C86	337 aa	Known RBP	11.16	□□□□□ -0.62
TRIM16-222	ENST00000581224	SLF1	Q9BQI6	1058 aa		11.16	□□□□□ -0.62
TRIM16-222	ENST00000581224	TMEM60	Q9H2L4	133 aa		11.16	□□□□□ -0.62
TRIM16-222	ENST00000581224	TTC12	Q9H892	705 aa	Predicted RBP	11.16	□□□□□ -0.62
TRIM16-222	ENST00000581224	KBTBD4	Q9NVX7	518 aa		11.16	□□□□□ -0.62
TRIM16-222	ENST00000581224	TMEM260	Q9NX78	707 aa		11.16	□□□□□ -0.62
TRIM16-222	ENST00000581224	PVALEF	A0A1B0GWK0	134 aa		11.15	□□□□□ -0.62
TRIM16-222	ENST00000581224	WNT7A	O00755	349 aa		11.15	□□□□□ -0.62
TRIM16-222	ENST00000581224	RPN1	P04843	607 aa	Known RBP	11.15	□□□□□ -0.62
TRIM16-222	ENST00000581224	HSPA6	P17066	643 aa		11.15	□□□□□ -0.62
TRIM16-222	ENST00000581224	CDK11B	P21127	795 aa	Known RBP	11.15	□□□□□ -0.62
TRIM16-222	ENST00000581224	MUT	P22033	750 aa		11.15	□□□□□ -0.62
TRIM16-222	ENST00000581224	NF2	P35240	595 aa		11.15	□□□□□ -0.62
TRIM16-222	ENST00000581224	OAZ1	P54368	228 aa		11.15	□□□□□ -0.62
TRIM16-222	ENST00000581224	JAG1	P78504	1218 aa		11.15	□□□□□ -0.62
TRIM16-222	ENST00000581224	PSMD2	Q13200	908 aa		11.15	□□□□□ -0.62
TRIM16-222	ENST00000581224	UBE2S	Q16763	222 aa		11.15	□□□□□ -0.62
TRIM16-222	ENST00000581224	TPD52L1	Q16890	204 aa	Predicted RBP	11.15	□□□□□ -0.62
TRIM16-222	ENST00000581224	USH1G	Q495M9	461 aa		11.15	□□□□□ -0.62
TRIM16-222	ENST00000581224	NOL9	Q5SY16	702 aa	Known RBP	11.15	□□□□□ -0.62
TRIM16-222	ENST00000581224	ANGEL2	Q5VTE6	544 aa	Known RBP	11.15	□□□□□ -0.62
TRIM16-222	ENST00000581224	SPATA1	Q5VX52	437 aa		11.15	□□□□□ -0.62
TRIM16-222	ENST00000581224	CNNM4	Q6P4Q7	775 aa		11.15	□□□□□ -0.62
TRIM16-222	ENST00000581224	POTED	Q86YR6	584 aa		11.15	□□□□□ -0.62
TRIM16-222	ENST00000581224	SPICE1	Q8N0Z3	855 aa		11.15	□□□□□ -0.62
TRIM16-222	ENST00000581224	ZNF280C	Q8ND82	737 aa		11.15	□□□□□ -0.62
TRIM16-222	ENST00000581224	NOC3L	Q8WTT2	800 aa	Known RBP	11.15	□□□□□ -0.62
TRIM16-222	ENST00000581224	ZC3H15	Q8WU90	426 aa	Known RBP	11.15	□□□□□ -0.62
TRIM16-222	ENST00000581224	KIFC2	Q96AC6	838 aa		11.15	□□□□□ -0.62
TRIM16-222	ENST00000581224	NUP88	Q99567	741 aa	Predicted RBP	11.15	□□□□□ -0.62
TRIM16-222	ENST00000581224	C7orf25	Q9BPX7	421 aa		11.15	□□□□□ -0.62
TRIM16-222	ENST00000581224	MYPN	Q86TC9	1320 aa		11.14	□□□□□ -0.63
TRIM16-222	ENST00000581224	BICDL2	A1A5D9	508 aa		11.14	□□□□□ -0.63
TRIM16-222	ENST00000581224	USP17L15	C9J2P7	530 aa		11.14	□□□□□ -0.63
TRIM16-222	ENST00000581224	USP17L13	C9JLJ4	530 aa		11.14	□□□□□ -0.63
TRIM16-222	ENST00000581224	USP17L11	C9JVI0	530 aa		11.14	□□□□□ -0.63
TRIM16-222	ENST00000581224	USP17L18	D6R9N7	530 aa		11.14	□□□□□ -0.63
TRIM16-222	ENST00000581224	USP17L22	D6RA61	530 aa		11.14	□□□□□ -0.63
TRIM16-222	ENST00000581224	USP17L17	D6RBQ6	530 aa		11.14	□□□□□ -0.63
TRIM16-222	ENST00000581224	USP17L19	D6RCP7	530 aa		11.14	□□□□□ -0.63
TRIM16-222	ENST00000581224	USP17L20	D6RJB6	530 aa		11.14	□□□□□ -0.63
TRIM16-222	ENST00000581224	PPP1R12B	O60237	982 aa	Predicted RBP	11.14	□□□□□ -0.63
TRIM16-222	ENST00000581224	ZNF500	O60304	480 aa	Predicted RBP	11.14	□□□□□ -0.63
TRIM16-222	ENST00000581224	KIF20A	O95235	890 aa		11.14	□□□□□ -0.63
TRIM16-222	ENST00000581224	SERPINC1	P01008	464 aa		11.14	□□□□□ -0.63
TRIM16-222	ENST00000581224	PRKCSH	P14314	528 aa	Predicted RBP	11.14	□□□□□ -0.63
TRIM16-222	ENST00000581224	CLCN1	P35523	988 aa		11.14	□□□□□ -0.63
TRIM16-222	ENST00000581224	BACE1	P56817	501 aa		11.14	□□□□□ -0.63
TRIM16-222	ENST00000581224	SET	Q01105	290 aa	Predicted RBP	11.14	□□□□□ -0.63
TRIM16-222	ENST00000581224	USP17L24	Q0WX57	530 aa		11.14	□□□□□ -0.63
TRIM16-222	ENST00000581224	KARS	Q15046	597 aa	Known RBP	11.14	□□□□□ -0.63
TRIM16-222	ENST00000581224	FILIP1L	Q4L180	1135 aa		11.14	□□□□□ -0.63
TRIM16-222	ENST00000581224	HYI	Q5T013	277 aa		11.14	□□□□□ -0.63
TRIM16-222	ENST00000581224	USP17L6P	Q6QN14	398 aa		11.14	□□□□□ -0.63
TRIM16-222	ENST00000581224	SULF1	Q8IWU6	871 aa		11.14	□□□□□ -0.63
TRIM16-222	ENST00000581224	C12orf42	Q96LP6	360 aa		11.14	□□□□□ -0.63
TRIM16-222	ENST00000581224	KCNMB3	Q9NPA1	279 aa		11.14	□□□□□ -0.63
TRIM16-222	ENST00000581224	TMOD4	Q9NZQ9	345 aa		11.14	□□□□□ -0.63
TRIM16-222	ENST00000581224		A0A087X0B3	334 aa		11.13	□□□□□ -0.63
TRIM16-222	ENST00000581224	PSMA7	O14818	248 aa		11.13	□□□□□ -0.63
TRIM16-222	ENST00000581224	ADAMTS3	O15072	1205 aa		11.13	□□□□□ -0.63
TRIM16-222	ENST00000581224	RHOBTB3	O94955	611 aa		11.13	□□□□□ -0.63
TRIM16-222	ENST00000581224	TDP2	O95551	362 aa		11.13	□□□□□ -0.63
TRIM16-222	ENST00000581224	FGFR1OP	O95684	399 aa	Known RBP	11.13	□□□□□ -0.63
TRIM16-222	ENST00000581224	EGFR	P00533	1210 aa		11.13	□□□□□ -0.63
TRIM16-222	ENST00000581224	SLURP2	P0DP57	97 aa		11.13	□□□□□ -0.63
TRIM16-222	ENST00000581224	PLCG1	P19174	1290 aa		11.13	□□□□□ -0.63
TRIM16-222	ENST00000581224	UBASH3A	P57075	661 aa		11.13	□□□□□ -0.63
TRIM16-222	ENST00000581224	GHRHR	Q02643	423 aa		11.13	□□□□□ -0.63
TRIM16-222	ENST00000581224	TKFC	Q3LXA3	575 aa		11.13	□□□□□ -0.63
TRIM16-222	ENST00000581224	COBLL1	Q53SF7	1204 aa		11.13	□□□□□ -0.63
TRIM16-222	ENST00000581224	NBPF12	Q5TAG4	269 aa	Predicted RBP	11.13	□□□□□ -0.63
TRIM16-222	ENST00000581224	XRRA1	Q6P2D8	792 aa		11.13	□□□□□ -0.63
TRIM16-222	ENST00000581224	NIPA1	Q7RTP0	329 aa		11.13	□□□□□ -0.63
TRIM16-222	ENST00000581224	SNX29	Q8TEQ0	813 aa		11.13	□□□□□ -0.63
TRIM16-222	ENST00000581224	CRYGN	Q8WXF5	182 aa		11.13	□□□□□ -0.63
TRIM16-222	ENST00000581224	ERCC4	Q92889	916 aa	Predicted RBP	11.13	□□□□□ -0.63
TRIM16-222	ENST00000581224	DHTKD1	Q96HY7	919 aa	Predicted RBP	11.13	□□□□□ -0.63
TRIM16-222	ENST00000581224	WRNIP1	Q96S55	665 aa		11.13	□□□□□ -0.63
TRIM16-222	ENST00000581224	WDR11	Q9BZH6	1224 aa		11.13	□□□□□ -0.63
TRIM16-222	ENST00000581224	HOXC10	Q9NYD6	342 aa		11.13	□□□□□ -0.63
TRIM16-222	ENST00000581224	RWDD2A	Q9UIY3	292 aa		11.13	□□□□□ -0.63
TRIM16-222	ENST00000581224	CCPG1	Q9ULG6	757 aa		11.13	□□□□□ -0.63
TRIM16-222	ENST00000581224	LOXHD1	Q8IVV2	1947 aa		11.13	□□□□□ -0.63
TRIM16-222	ENST00000581224	UNCX	A6NJT0	531 aa		11.12	□□□□□ -0.63
TRIM16-222	ENST00000581224	CFB	P00751	764 aa		11.12	□□□□□ -0.63
TRIM16-222	ENST00000581224	TPM2	P07951	284 aa		11.12	□□□□□ -0.63
TRIM16-222	ENST00000581224	PRR29	P0C7W0	189 aa		11.12	□□□□□ -0.63
TRIM16-222	ENST00000581224	APLP1	P51693	650 aa		11.12	□□□□□ -0.63
TRIM16-222	ENST00000581224	HTRA3	P83110	453 aa		11.12	□□□□□ -0.63
TRIM16-222	ENST00000581224	FANCC	Q00597	558 aa		11.12	□□□□□ -0.63
TRIM16-222	ENST00000581224	NCAPH	Q15003	741 aa		11.12	□□□□□ -0.63
TRIM16-222	ENST00000581224	SHROOM1	Q2M3G4	852 aa	Predicted RBP	11.12	□□□□□ -0.63
TRIM16-222	ENST00000581224	ISM2	Q6H9L7	571 aa		11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms