RNA–Protein interactions for RNA: ENST00000578571.5

PTPRM-207, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 1,106 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-207ENST00000578571 RIMS2Q9UQ26 1411 aa7.03□□□□□ -1.28
PTPRM-207ENST00000578571 SLIT1O75093 1534 aa7.03□□□□□ -1.28
PTPRM-207ENST00000578571 NAT2P11245 290 aa7.03□□□□□ -1.28
PTPRM-207ENST00000578571 RPL10P27635 214 aaKnown RBP7.03□□□□□ -1.28
PTPRM-207ENST00000578571 GDNFP39905 211 aa7.03□□□□□ -1.28
PTPRM-207ENST00000578571 CWF19L1Q69YN2 538 aaKnown RBP7.03□□□□□ -1.28
PTPRM-207ENST00000578571 WAPLQ7Z5K2 1190 aa7.03□□□□□ -1.28
PTPRM-207ENST00000578571 DNAJC2Q99543 621 aaKnown RBP7.03□□□□□ -1.28
PTPRM-207ENST00000578571 MCMBPQ9BTE3 642 aa7.03□□□□□ -1.28
PTPRM-207ENST00000578571 SUGT1Q9Y2Z0 365 aa7.03□□□□□ -1.28
PTPRM-207ENST00000578571 EMC9Q9Y3B6 208 aa7.03□□□□□ -1.28
PTPRM-207ENST00000578571 ZFYVE9O95405 1425 aa7.02□□□□□ -1.29
PTPRM-207ENST00000578571 LAMC1P11047 1609 aa7.02□□□□□ -1.29
PTPRM-207ENST00000578571 SSU72P8A0A1W2PR75 194 aa7.02□□□□□ -1.29
PTPRM-207ENST00000578571 HK2P52789 917 aa7.02□□□□□ -1.29
PTPRM-207ENST00000578571 SLC10A6Q3KNW5 377 aa7.02□□□□□ -1.29
PTPRM-207ENST00000578571 EEPD1Q7L9B9 569 aa7.02□□□□□ -1.29
PTPRM-207ENST00000578571 BVESQ8NE79 360 aa7.02□□□□□ -1.29
PTPRM-207ENST00000578571 FLAD1Q8NFF5 587 aa7.02□□□□□ -1.29
PTPRM-207ENST00000578571 LINC01599Q8WXQ3 324 aa7.02□□□□□ -1.29
PTPRM-207ENST00000578571 MRGPRX3Q96LB0 322 aa7.02□□□□□ -1.29
PTPRM-207ENST00000578571 FCRL3Q96P31 734 aaPredicted RBP7.02□□□□□ -1.29
PTPRM-207ENST00000578571 SP110Q9HB58 689 aa7.02□□□□□ -1.29
PTPRM-207ENST00000578571 AKT3Q9Y243 479 aa7.02□□□□□ -1.29
PTPRM-207ENST00000578571 SCAF11Q99590 1463 aaKnown RBP7.02□□□□□ -1.29
PTPRM-207ENST00000578571 ARHGAP23Q9P227 1491 aa7.01□□□□□ -1.29
PTPRM-207ENST00000578571 VAMP4O75379 141 aa7.01□□□□□ -1.29
PTPRM-207ENST00000578571 IFNGR1P15260 489 aa7.01□□□□□ -1.29
PTPRM-207ENST00000578571 ITGB5P18084 799 aa7.01□□□□□ -1.29
PTPRM-207ENST00000578571 IRAK1P51617 712 aa7.01□□□□□ -1.29
PTPRM-207ENST00000578571 ERVFC1P60507 584 aa7.01□□□□□ -1.29
PTPRM-207ENST00000578571 POU4F1Q01851 419 aa7.01□□□□□ -1.29
PTPRM-207ENST00000578571 GRB10Q13322 594 aa7.01□□□□□ -1.29
PTPRM-207ENST00000578571 CCDC120Q96HB5 630 aa7.01□□□□□ -1.29
PTPRM-207ENST00000578571 AP5S1Q9NUS5 200 aa7.01□□□□□ -1.29
PTPRM-207ENST00000578571 SIRPGQ9P1W8 387 aa7.01□□□□□ -1.29
PTPRM-207ENST00000578571 NEXMIFQ5QGS0 1516 aa7.01□□□□□ -1.29
PTPRM-207ENST00000578571 PPLO60437 1756 aa7□□□□□ -1.29
PTPRM-207ENST00000578571 DIP2AQ14689 1571 aa7□□□□□ -1.29
PTPRM-207ENST00000578571 LMTK3Q96Q04 1460 aa7□□□□□ -1.29
PTPRM-207ENST00000578571 PLEKHG1Q9ULL1 1385 aa7□□□□□ -1.29
PTPRM-207ENST00000578571 U2SURPO15042 1029 aaKnown RBP7□□□□□ -1.29
PTPRM-207ENST00000578571 TBX1O43435 398 aa7□□□□□ -1.29
PTPRM-207ENST00000578571 PAPLNO95428 1278 aa7□□□□□ -1.29
PTPRM-207ENST00000578571 HPXP02790 462 aa7□□□□□ -1.29
PTPRM-207ENST00000578571 ITGAVP06756 1048 aa7□□□□□ -1.29
PTPRM-207ENST00000578571 CD3EP07766 207 aa7□□□□□ -1.29
PTPRM-207ENST00000578571 GSTM1P09488 218 aa7□□□□□ -1.29
PTPRM-207ENST00000578571 SV2CQ496J9 727 aa7□□□□□ -1.29
PTPRM-207ENST00000578571 ATG4DQ86TL0 474 aaPredicted RBP7□□□□□ -1.29
PTPRM-207ENST00000578571 ZNF227Q86WZ6 799 aa7□□□□□ -1.29
PTPRM-207ENST00000578571 TRIM59Q8IWR1 403 aa7□□□□□ -1.29
PTPRM-207ENST00000578571 PDZD8Q8NEN9 1154 aa7□□□□□ -1.29
PTPRM-207ENST00000578571 PMFBP1Q8TBY8 1022 aa7□□□□□ -1.29
PTPRM-207ENST00000578571 UBXN4Q92575 508 aa7□□□□□ -1.29
PTPRM-207ENST00000578571 MAP6Q96JE9 813 aa7□□□□□ -1.29
PTPRM-207ENST00000578571 HHIPL1Q96JK4 782 aa7□□□□□ -1.29
PTPRM-207ENST00000578571 FCRL2Q96LA5 508 aaPredicted RBP7□□□□□ -1.29
PTPRM-207ENST00000578571 CDADC1Q9BWV3 514 aa7□□□□□ -1.29
PTPRM-207ENST00000578571 EPN3Q9H201 632 aa7□□□□□ -1.29
PTPRM-207ENST00000578571 ERVK13-1Q9NX77 482 aa7□□□□□ -1.29
PTPRM-207ENST00000578571 POLR1AO95602 1720 aaPredicted RBP7□□□□□ -1.29
PTPRM-207ENST00000578571 IFT172Q9UG01 1749 aa7□□□□□ -1.29
PTPRM-207ENST00000578571 MYO5BQ9ULV0 1848 aa6.99□□□□□ -1.29
PTPRM-207ENST00000578571 AURKAO14965 403 aa6.99□□□□□ -1.29
PTPRM-207ENST00000578571 KCNH1O95259 989 aa6.99□□□□□ -1.29
PTPRM-207ENST00000578571 ENDOUP21128 410 aaKnown RBP6.99□□□□□ -1.29
PTPRM-207ENST00000578571 DUSP4Q13115 394 aa6.99□□□□□ -1.29
PTPRM-207ENST00000578571 DPY19L1Q2PZI1 675 aa6.99□□□□□ -1.29
PTPRM-207ENST00000578571 SOGA3Q5TF21 947 aa6.99□□□□□ -1.29
PTPRM-207ENST00000578571 FYB2Q5VWT5 728 aa6.99□□□□□ -1.29
PTPRM-207ENST00000578571 TMEM52Q8NDY8 209 aa6.99□□□□□ -1.29
PTPRM-207ENST00000578571 PPP1R14AQ96A00 147 aa6.99□□□□□ -1.29
PTPRM-207ENST00000578571 CCDC113Q9H0I3 377 aa6.99□□□□□ -1.29
PTPRM-207ENST00000578571 ZMYM5Q9UJ78 669 aa6.99□□□□□ -1.29
PTPRM-207ENST00000578571 GPR55Q9Y2T6 319 aaPredicted RBP6.99□□□□□ -1.29
PTPRM-207ENST00000578571 NPHP4O75161 1426 aaPredicted RBP6.99□□□□□ -1.29
PTPRM-207ENST00000578571 PRAG1Q86YV5 1406 aa6.99□□□□□ -1.29
PTPRM-207ENST00000578571 KIAA1210Q9ULL0 1709 aa6.98□□□□□ -1.29
PTPRM-207ENST00000578571 ROCK2O75116 1388 aaKnown RBP6.98□□□□□ -1.29
PTPRM-207ENST00000578571 EIF3AQ14152 1382 aaKnown RBP6.98□□□□□ -1.29
PTPRM-207ENST00000578571 PIK3R4Q99570 1358 aa6.98□□□□□ -1.29
PTPRM-207ENST00000578571 NOTOA8MTQ0 251 aa6.98□□□□□ -1.29
PTPRM-207ENST00000578571 STXBP3O00186 592 aa6.98□□□□□ -1.29
PTPRM-207ENST00000578571 NOP56O00567 594 aaKnown RBP6.98□□□□□ -1.29
PTPRM-207ENST00000578571 FGF10O15520 208 aaPredicted RBP6.98□□□□□ -1.29
PTPRM-207ENST00000578571 CAPNS1P04632 268 aa6.98□□□□□ -1.29
PTPRM-207ENST00000578571 NOP2P46087 812 aaKnown RBP6.98□□□□□ -1.29
PTPRM-207ENST00000578571 AMPD2Q01433 879 aa6.98□□□□□ -1.29
PTPRM-207ENST00000578571 RASA3Q14644 834 aa6.98□□□□□ -1.29
PTPRM-207ENST00000578571 TIGD5Q53EQ6 642 aa6.98□□□□□ -1.29
PTPRM-207ENST00000578571 GTF2IRD2BQ6EKJ0 949 aa6.98□□□□□ -1.29
PTPRM-207ENST00000578571 POMZP3Q6PJE2 187 aa6.98□□□□□ -1.29
PTPRM-207ENST00000578571 GTF2IRD2Q86UP8 949 aa6.98□□□□□ -1.29
PTPRM-207ENST00000578571 CRACR2BQ8N4Y2 399 aaPredicted RBP6.98□□□□□ -1.29
PTPRM-207ENST00000578571 ANKS4BQ8N8V4 417 aa6.98□□□□□ -1.29
PTPRM-207ENST00000578571 ST13P5Q8NFI4 369 aaPredicted RBP6.98□□□□□ -1.29
PTPRM-207ENST00000578571 SYTL4Q96C24 671 aaPredicted RBP6.98□□□□□ -1.29
PTPRM-207ENST00000578571 PIK3C2GO75747 1445 aa6.98□□□□□ -1.29
PTPRM-207ENST00000578571 SETBP1Q9Y6X0 1596 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms