RNA–Protein interactions for RNA: ENST00000578357.5

CUEDC1-208, Transcript of CUE domain containing 1, humanhuman

TSL 3

Gene CUEDC1, Length 661 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-208ENST00000578357 MYH4Q9Y623 1939 aa11.78□□□□□ -0.52
CUEDC1-208ENST00000578357 PRRC2BQ5JSZ5 2229 aaKnown RBP11.77□□□□□ -0.53
CUEDC1-208ENST00000578357 EPOPA6NHQ4 379 aa11.77□□□□□ -0.53
CUEDC1-208ENST00000578357 NFIBO00712 420 aa11.77□□□□□ -0.53
CUEDC1-208ENST00000578357 TXNP10599 105 aaKnown RBP11.77□□□□□ -0.53
CUEDC1-208ENST00000578357 CALML3P27482 149 aa11.77□□□□□ -0.53
CUEDC1-208ENST00000578357 KCNJ6P48051 423 aa11.77□□□□□ -0.53
CUEDC1-208ENST00000578357 NOVP48745 357 aa11.77□□□□□ -0.53
CUEDC1-208ENST00000578357 GRB10Q13322 594 aa11.77□□□□□ -0.53
CUEDC1-208ENST00000578357 ZMYM1Q5SVZ6 1142 aa11.77□□□□□ -0.53
CUEDC1-208ENST00000578357 SYDE2Q5VT97 1194 aa11.77□□□□□ -0.53
CUEDC1-208ENST00000578357 KRT40Q6A162 431 aa11.77□□□□□ -0.53
CUEDC1-208ENST00000578357 TTBK2Q6IQ55 1244 aa11.77□□□□□ -0.53
CUEDC1-208ENST00000578357 PI4K2BQ8TCG2 481 aa11.77□□□□□ -0.53
CUEDC1-208ENST00000578357 FSD1Q9BTV5 496 aa11.77□□□□□ -0.53
CUEDC1-208ENST00000578357 ANAPC4Q9UJX5 808 aa11.77□□□□□ -0.53
CUEDC1-208ENST00000578357 SUPT16HQ9Y5B9 1047 aaKnown RBP11.77□□□□□ -0.53
CUEDC1-208ENST00000578357 REV3LO60673 3130 aa11.77□□□□□ -0.53
CUEDC1-208ENST00000578357 GPR37L1O60883 481 aa11.76□□□□□ -0.53
CUEDC1-208ENST00000578357 PARNO95453 639 aaKnown RBP11.76□□□□□ -0.53
CUEDC1-208ENST00000578357 IGHDP01880 384 aa11.76□□□□□ -0.53
CUEDC1-208ENST00000578357 TOP1P11387 765 aaKnown RBP11.76□□□□□ -0.53
CUEDC1-208ENST00000578357 CHMP4BP1P59074 171 aa11.76□□□□□ -0.53
CUEDC1-208ENST00000578357 PTGISQ16647 500 aa11.76□□□□□ -0.53
CUEDC1-208ENST00000578357 CAGE1Q8TC20 777 aa11.76□□□□□ -0.53
CUEDC1-208ENST00000578357 CLEC4DQ8WXI8 215 aa11.76□□□□□ -0.53
CUEDC1-208ENST00000578357 GPCPD1Q9NPB8 672 aa11.76□□□□□ -0.53
CUEDC1-208ENST00000578357 TOMM22Q9NS69 142 aa11.76□□□□□ -0.53
CUEDC1-208ENST00000578357 TCF20Q9UGU0 1960 aaKnown RBP11.76□□□□□ -0.53
CUEDC1-208ENST00000578357 ORC4O43929 436 aa11.75□□□□□ -0.53
CUEDC1-208ENST00000578357 FGRP09769 529 aa11.75□□□□□ -0.53
CUEDC1-208ENST00000578357 EDNRBP24530 442 aa11.75□□□□□ -0.53
CUEDC1-208ENST00000578357 RPS6P62753 249 aaKnown RBP11.75□□□□□ -0.53
CUEDC1-208ENST00000578357 B4GALNT3Q6L9W6 998 aa11.75□□□□□ -0.53
CUEDC1-208ENST00000578357 SLC30A10Q6XR72 485 aa11.75□□□□□ -0.53
CUEDC1-208ENST00000578357 RGS22Q8NE09 1264 aa11.75□□□□□ -0.53
CUEDC1-208ENST00000578357 AFAP1L1Q8TED9 768 aa11.75□□□□□ -0.53
CUEDC1-208ENST00000578357 TTC14Q96N46 770 aa11.75□□□□□ -0.53
CUEDC1-208ENST00000578357 TCP11L1Q9NUJ3 509 aa11.75□□□□□ -0.53
CUEDC1-208ENST00000578357 PI4K2BG5E9Z4 385 aa11.74□□□□□ -0.53
CUEDC1-208ENST00000578357 LPXNO60711 386 aa11.74□□□□□ -0.53
CUEDC1-208ENST00000578357 ARHGEF15O94989 841 aa11.74□□□□□ -0.53
CUEDC1-208ENST00000578357 SELPP16109 830 aa11.74□□□□□ -0.53
CUEDC1-208ENST00000578357 CASTP20810 708 aaKnown RBP11.74□□□□□ -0.53
CUEDC1-208ENST00000578357 WDR5P61964 334 aaKnown RBP11.74□□□□□ -0.53
CUEDC1-208ENST00000578357 ANKRD45Q5TZF3 282 aa11.74□□□□□ -0.53
CUEDC1-208ENST00000578357 RASGRP2Q7LDG7 609 aa11.74□□□□□ -0.53
CUEDC1-208ENST00000578357 PPP1R13LQ8WUF5 828 aa11.74□□□□□ -0.53
CUEDC1-208ENST00000578357 COPS5Q92905 334 aa11.74□□□□□ -0.53
CUEDC1-208ENST00000578357 RAD9AQ99638 391 aa11.74□□□□□ -0.53
CUEDC1-208ENST00000578357 TMEM47Q9BQJ4 181 aa11.74□□□□□ -0.53
CUEDC1-208ENST00000578357 MAF1Q9H063 256 aa11.74□□□□□ -0.53
CUEDC1-208ENST00000578357 FRMPD2Q68DX3 1309 aaPredicted RBP11.74□□□□□ -0.53
CUEDC1-208ENST00000578357 GBF1Q92538 1859 aa11.74□□□□□ -0.53
CUEDC1-208ENST00000578357 ABHD14A-ACY1A0A1B0GW23 586 aa11.73□□□□□ -0.53
CUEDC1-208ENST00000578357 EFCAB14O75071 495 aa11.73□□□□□ -0.53
CUEDC1-208ENST00000578357 GH1P01241 217 aa11.73□□□□□ -0.53
CUEDC1-208ENST00000578357 MX1P20591 662 aa11.73□□□□□ -0.53
CUEDC1-208ENST00000578357 IKBKEQ14164 716 aa11.73□□□□□ -0.53
CUEDC1-208ENST00000578357 ALX1Q15699 326 aa11.73□□□□□ -0.53
CUEDC1-208ENST00000578357 CNKSR3Q6P9H4 555 aa11.73□□□□□ -0.53
CUEDC1-208ENST00000578357 LRRC8DQ7L1W4 858 aa11.73□□□□□ -0.53
CUEDC1-208ENST00000578357 SESTD1Q86VW0 696 aa11.73□□□□□ -0.53
CUEDC1-208ENST00000578357 AFG1LQ8WV93 481 aa11.73□□□□□ -0.53
CUEDC1-208ENST00000578357 TGS1Q96RS0 853 aaKnown RBP11.73□□□□□ -0.53
CUEDC1-208ENST00000578357 LNPKQ9C0E8 428 aa11.73□□□□□ -0.53
CUEDC1-208ENST00000578357 WDR19Q8NEZ3 1342 aa11.72□□□□□ -0.53
CUEDC1-208ENST00000578357 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.72□□□□□ -0.53
CUEDC1-208ENST00000578357 FOXP2O15409 715 aa11.72□□□□□ -0.53
CUEDC1-208ENST00000578357 PDHBP11177 359 aa11.72□□□□□ -0.53
CUEDC1-208ENST00000578357 ERVK-21P61565 698 aa11.72□□□□□ -0.53
CUEDC1-208ENST00000578357 ZNF543Q08ER8 600 aa11.72□□□□□ -0.53
CUEDC1-208ENST00000578357 HDAC1Q13547 482 aaPredicted RBP11.72□□□□□ -0.53
CUEDC1-208ENST00000578357 DGKDQ16760 1214 aa11.72□□□□□ -0.53
CUEDC1-208ENST00000578357 RRP12Q5JTH9 1297 aaKnown RBP11.72□□□□□ -0.53
CUEDC1-208ENST00000578357 GDF6Q6KF10 455 aaPredicted RBP11.72□□□□□ -0.53
CUEDC1-208ENST00000578357 CCDC62Q6P9F0 684 aa11.72□□□□□ -0.53
CUEDC1-208ENST00000578357 C7orf31Q8N865 590 aa11.72□□□□□ -0.53
CUEDC1-208ENST00000578357 NSUN6Q8TEA1 469 aaKnown RBP11.72□□□□□ -0.53
CUEDC1-208ENST00000578357 SUGCTQ9HAC7 445 aa11.72□□□□□ -0.53
CUEDC1-208ENST00000578357 HELLSQ9NRZ9 838 aa11.72□□□□□ -0.53
CUEDC1-208ENST00000578357 LAMA4Q16363 1823 aa11.72□□□□□ -0.53
CUEDC1-208ENST00000578357 LCHNA4D1U4 455 aa11.71□□□□□ -0.53
CUEDC1-208ENST00000578357 ARIH2O95376 493 aa11.71□□□□□ -0.53
CUEDC1-208ENST00000578357 GJB5O95377 273 aa11.71□□□□□ -0.53
CUEDC1-208ENST00000578357 FGAP02671 866 aa11.71□□□□□ -0.53
CUEDC1-208ENST00000578357 CXCL10P02778 98 aa11.71□□□□□ -0.53
CUEDC1-208ENST00000578357 MMP3P08254 477 aa11.71□□□□□ -0.53
CUEDC1-208ENST00000578357 CKBP12277 381 aa11.71□□□□□ -0.53
CUEDC1-208ENST00000578357 RBL2Q08999 1139 aa11.71□□□□□ -0.53
CUEDC1-208ENST00000578357 GPNMBQ14956 572 aa11.71□□□□□ -0.53
CUEDC1-208ENST00000578357 STXBP2Q15833 593 aa11.71□□□□□ -0.53
CUEDC1-208ENST00000578357 LY6KQ17RY6 165 aa11.71□□□□□ -0.53
CUEDC1-208ENST00000578357 GPATCH4Q5T3I0 446 aaKnown RBP11.71□□□□□ -0.53
CUEDC1-208ENST00000578357 VPS53Q5VIR6 699 aa11.71□□□□□ -0.53
CUEDC1-208ENST00000578357 SEPT14Q6ZU15 432 aa11.71□□□□□ -0.53
CUEDC1-208ENST00000578357 TMCO2Q7Z6W1 182 aaPredicted RBP11.71□□□□□ -0.53
CUEDC1-208ENST00000578357 MCF2L2Q86YR7 1114 aa11.71□□□□□ -0.53
CUEDC1-208ENST00000578357 EVI5LQ96CN4 794 aa11.71□□□□□ -0.53
CUEDC1-208ENST00000578357 IWS1Q96ST2 819 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms