RNA–Protein interactions for RNA: ENST00000577052.5

ABR-236, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 617 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-236ENST00000577052 VTA1Q9NP79 307 aa20.14■□□□□ 0.81
ABR-236ENST00000577052 RBAK-RBAKDNI3L0D1 243 aa20.13■□□□□ 0.81
ABR-236ENST00000577052 RANBP6O60518 1105 aaKnown RBP20.13■□□□□ 0.81
ABR-236ENST00000577052 ALDH5A1P51649 535 aaPredicted RBP20.13■□□□□ 0.81
ABR-236ENST00000577052 COL9A3Q14050 684 aaPredicted RBP20.13■□□□□ 0.81
ABR-236ENST00000577052 CCDC85BQ15834 202 aaPredicted RBP20.13■□□□□ 0.81
ABR-236ENST00000577052 DUSP28Q4G0W2 176 aa20.13■□□□□ 0.81
ABR-236ENST00000577052 CLEC4DQ8WXI8 215 aa20.13■□□□□ 0.81
ABR-236ENST00000577052 ALDH8A1Q9H2A2 487 aaPredicted RBP20.13■□□□□ 0.81
ABR-236ENST00000577052 TRMT13Q9NUP7 481 aaKnown RBP20.13■□□□□ 0.81
ABR-236ENST00000577052 SCN10AQ9Y5Y9 1956 aa20.13■□□□□ 0.81
ABR-236ENST00000577052 FRMPD2Q68DX3 1309 aaPredicted RBP20.12■□□□□ 0.81
ABR-236ENST00000577052 RBM47A0AV96 593 aaKnown RBP20.12■□□□□ 0.81
ABR-236ENST00000577052 CYP2C9P11712 490 aa20.12■□□□□ 0.81
ABR-236ENST00000577052 RAB30Q15771 203 aa20.12■□□□□ 0.81
ABR-236ENST00000577052 SLC30A10Q6XR72 485 aa20.12■□□□□ 0.81
ABR-236ENST00000577052 DCAF4Q8WV16 495 aa20.12■□□□□ 0.81
ABR-236ENST00000577052 TMEM47Q9BQJ4 181 aa20.12■□□□□ 0.81
ABR-236ENST00000577052 UPF3BQ9BZI7 483 aaKnown RBP20.12■□□□□ 0.81
ABR-236ENST00000577052 TM6SF1Q9BZW5 370 aa20.12■□□□□ 0.81
ABR-236ENST00000577052 MSRAQ9UJ68 235 aa20.12■□□□□ 0.81
ABR-236ENST00000577052 E7EWF7 191 aa20.11■□□□□ 0.81
ABR-236ENST00000577052 ZNF213O14771 459 aa20.11■□□□□ 0.81
ABR-236ENST00000577052 CD2BP2O95400 341 aaKnown RBP20.11■□□□□ 0.81
ABR-236ENST00000577052 PURAQ00577 322 aaKnown RBP20.11■□□□□ 0.81
ABR-236ENST00000577052 KRT32Q14532 448 aa20.11■□□□□ 0.81
ABR-236ENST00000577052 TTLL4Q14679 1199 aa20.11■□□□□ 0.81
ABR-236ENST00000577052 CCDC96Q2M329 555 aa20.11■□□□□ 0.81
ABR-236ENST00000577052 ZSWIM6Q9HCJ5 1215 aa20.11■□□□□ 0.81
ABR-236ENST00000577052 TNFRSF10AO00220 468 aa20.1■□□□□ 0.81
ABR-236ENST00000577052 CPA1P15085 419 aa20.1■□□□□ 0.81
ABR-236ENST00000577052 CASTP20810 708 aaKnown RBP20.1■□□□□ 0.81
ABR-236ENST00000577052 SYDE2Q5VT97 1194 aa20.1■□□□□ 0.81
ABR-236ENST00000577052 TET1Q8NFU7 2136 aa20.1■□□□□ 0.81
ABR-236ENST00000577052 ASB2Q96Q27 587 aa20.1■□□□□ 0.81
ABR-236ENST00000577052 WDR11Q9BZH6 1224 aa20.1■□□□□ 0.81
ABR-236ENST00000577052 GPCPD1Q9NPB8 672 aa20.1■□□□□ 0.81
ABR-236ENST00000577052 ZEB2O60315 1214 aa20.09■□□□□ 0.81
ABR-236ENST00000577052 IGFBP4P22692 258 aa20.09■□□□□ 0.81
ABR-236ENST00000577052 PPP4R3BQ5MIZ7 849 aa20.09■□□□□ 0.81
ABR-236ENST00000577052 ATXN2LQ8WWM7 1075 aaKnown RBP20.09■□□□□ 0.81
ABR-236ENST00000577052 COPS5Q92905 334 aa20.09■□□□□ 0.81
ABR-236ENST00000577052 SEZ6LQ9BYH1 1024 aa20.09■□□□□ 0.81
ABR-236ENST00000577052 THEGQ9P2T0 379 aa20.09■□□□□ 0.81
ABR-236ENST00000577052 NCOR1O75376 2440 aa20.09■□□□□ 0.81
ABR-236ENST00000577052 TNKSO95271 1327 aa20.08■□□□□ 0.81
ABR-236ENST00000577052 NEDD4P46934 1319 aa20.08■□□□□ 0.81
ABR-236ENST00000577052 ARHGEF15O94989 841 aa20.08■□□□□ 0.81
ABR-236ENST00000577052 PDHBP11177 359 aa20.08■□□□□ 0.81
ABR-236ENST00000577052 PSMA5P28066 241 aa20.08■□□□□ 0.81
ABR-236ENST00000577052 NEK4P51957 841 aa20.08■□□□□ 0.81
ABR-236ENST00000577052 SNX21Q969T3 373 aa20.08■□□□□ 0.81
ABR-236ENST00000577052 TTC14Q96N46 770 aa20.08■□□□□ 0.81
ABR-236ENST00000577052 NEK1Q96PY6 1258 aa20.08■□□□□ 0.81
ABR-236ENST00000577052 SLC28A3Q9HAS3 691 aa20.08■□□□□ 0.81
ABR-236ENST00000577052 TCP11L1Q9NUJ3 509 aa20.08■□□□□ 0.81
ABR-236ENST00000577052 TCF20Q9UGU0 1960 aaKnown RBP20.08■□□□□ 0.8
ABR-236ENST00000577052 PRRC2BQ5JSZ5 2229 aaKnown RBP20.07■□□□□ 0.8
ABR-236ENST00000577052 PTPDC1A2A3K4 754 aa20.07■□□□□ 0.8
ABR-236ENST00000577052 RFXAPO00287 272 aa20.07■□□□□ 0.8
ABR-236ENST00000577052 TOP1P11387 765 aaKnown RBP20.07■□□□□ 0.8
ABR-236ENST00000577052 EDNRBP24530 442 aa20.07■□□□□ 0.8
ABR-236ENST00000577052 CALML3P27482 149 aa20.07■□□□□ 0.8
ABR-236ENST00000577052 RRP12Q5JTH9 1297 aaKnown RBP20.07■□□□□ 0.8
ABR-236ENST00000577052 BLOC1S2Q6QNY1 142 aa20.07■□□□□ 0.8
ABR-236ENST00000577052 RUFY3Q7L099 469 aa20.07■□□□□ 0.8
ABR-236ENST00000577052 RAPGEFL1Q9UHV5 662 aa20.07■□□□□ 0.8
ABR-236ENST00000577052 SLC4A7Q9Y6M7 1214 aa20.07■□□□□ 0.8
ABR-236ENST00000577052 XIRP2A4UGR9 3374 aa20.07■□□□□ 0.8
ABR-236ENST00000577052 PTPRSQ13332 1948 aa20.06■□□□□ 0.8
ABR-236ENST00000577052 EPOPA6NHQ4 379 aa20.06■□□□□ 0.8
ABR-236ENST00000577052 ARIH2O95376 493 aa20.06■□□□□ 0.8
ABR-236ENST00000577052 MYL3P08590 195 aa20.06■□□□□ 0.8
ABR-236ENST00000577052 SNHG28P0DPA3 235 aa20.06■□□□□ 0.8
ABR-236ENST00000577052 RPS6KB1P23443 525 aa20.06■□□□□ 0.8
ABR-236ENST00000577052 NBPF20Q3BBV1 942 aa20.06■□□□□ 0.8
ABR-236ENST00000577052 DEFB128Q7Z7B8 93 aa20.06■□□□□ 0.8
ABR-236ENST00000577052 MB21D2Q8IYB1 491 aaPredicted RBP20.06■□□□□ 0.8
ABR-236ENST00000577052 OR6J1Q8NGC5 347 aa20.06■□□□□ 0.8
ABR-236ENST00000577052 ADAMTS19Q8TE59 1207 aa20.06■□□□□ 0.8
ABR-236ENST00000577052 MTIF3Q9H2K0 278 aaKnown RBP20.06■□□□□ 0.8
ABR-236ENST00000577052 CPVLQ9H3G5 476 aa20.06■□□□□ 0.8
ABR-236ENST00000577052 ADD3Q9UEY8 706 aaKnown RBP20.06■□□□□ 0.8
ABR-236ENST00000577052 PCDHA11Q9Y5I1 949 aa20.06■□□□□ 0.8
ABR-236ENST00000577052 CYP46A1Q9Y6A2 500 aa20.06■□□□□ 0.8
ABR-236ENST00000577052 TANC1Q9C0D5 1861 aa20.05■□□□□ 0.8
ABR-236ENST00000577052 ZBBXA8MT70 800 aa20.05■□□□□ 0.8
ABR-236ENST00000577052 ST18O60284 1047 aa20.05■□□□□ 0.8
ABR-236ENST00000577052 ATP2A2P16615 1042 aaKnown RBP20.05■□□□□ 0.8
ABR-236ENST00000577052 RPS6P62753 249 aaKnown RBP20.05■□□□□ 0.8
ABR-236ENST00000577052 ZNF543Q08ER8 600 aa20.05■□□□□ 0.8
ABR-236ENST00000577052 PPP2R2DQ66LE6 453 aa20.05■□□□□ 0.8
ABR-236ENST00000577052 RPUSD2Q8IZ73 545 aaKnown RBP20.05■□□□□ 0.8
ABR-236ENST00000577052 TCEANC2Q96MN5 208 aa20.05■□□□□ 0.8
ABR-236ENST00000577052 CTAGE1Q96RT6 745 aa20.05■□□□□ 0.8
ABR-236ENST00000577052 MTG1Q9BT17 334 aaPredicted RBP20.05■□□□□ 0.8
ABR-236ENST00000577052 POLR3EQ9NVU0 708 aa20.05■□□□□ 0.8
ABR-236ENST00000577052 TRIP12Q14669 1992 aaPredicted RBP20.04■□□□□ 0.8
ABR-236ENST00000577052 LOC102724159A0A0B4J2E5 919 aa20.04■□□□□ 0.8
ABR-236ENST00000577052 MRPS5P82675 430 aaKnown RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms