RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 COPS5Q92905 334 aa30.26■■■□□ 2.43
NPLOC4-215ENST00000574095 TBX21Q9UL17 535 aa30.26■■■□□ 2.43
NPLOC4-215ENST00000574095 GRIN2DO15399 1336 aa30.25■■■□□ 2.43
NPLOC4-215ENST00000574095 MCM5P33992 734 aa30.25■■■□□ 2.43
NPLOC4-215ENST00000574095 PSMC6P62333 389 aa30.25■■■□□ 2.43
NPLOC4-215ENST00000574095 ITGA7Q13683 1181 aa30.25■■■□□ 2.43
NPLOC4-215ENST00000574095 CCDC136Q96JN2 1154 aa30.25■■■□□ 2.43
NPLOC4-215ENST00000574095 MYL10Q9BUA6 226 aa30.25■■■□□ 2.43
NPLOC4-215ENST00000574095 TXNP10599 105 aaKnown RBP30.24■■■□□ 2.43
NPLOC4-215ENST00000574095 ARHGEF16Q5VV41 709 aa30.24■■■□□ 2.43
NPLOC4-215ENST00000574095 ZNF654Q8IZM8 581 aa30.24■■■□□ 2.43
NPLOC4-215ENST00000574095 SLC43A3Q8NBI5 491 aa30.24■■■□□ 2.43
NPLOC4-215ENST00000574095 NKRFO15226 690 aaKnown RBP eCLIP30.23■■■□□ 2.43
NPLOC4-215ENST00000574095 TLR3O15455 904 aaKnown RBP30.23■■■□□ 2.43
NPLOC4-215ENST00000574095 ARIH2O95376 493 aa30.23■■■□□ 2.43
NPLOC4-215ENST00000574095 TIMP1P01033 207 aa30.23■■■□□ 2.43
NPLOC4-215ENST00000574095 EIF2AK2P19525 551 aaKnown RBP30.23■■■□□ 2.43
NPLOC4-215ENST00000574095 HSD17B4P51659 736 aa30.23■■■□□ 2.43
NPLOC4-215ENST00000574095 EPHB4P54760 987 aa30.23■■■□□ 2.43
NPLOC4-215ENST00000574095 GPR153Q6NV75 609 aa30.23■■■□□ 2.43
NPLOC4-215ENST00000574095 SEPT14Q6ZU15 432 aa30.23■■■□□ 2.43
NPLOC4-215ENST00000574095 PIBF1Q8WXW3 757 aa30.23■■■□□ 2.43
NPLOC4-215ENST00000574095 IWS1Q96ST2 819 aa30.23■■■□□ 2.43
NPLOC4-215ENST00000574095 MYL3P08590 195 aa30.22■■■□□ 2.43
NPLOC4-215ENST00000574095 CPT1AP50416 773 aa30.22■■■□□ 2.43
NPLOC4-215ENST00000574095 TTLL4Q14679 1199 aa30.22■■■□□ 2.43
NPLOC4-215ENST00000574095 STXBP2Q15833 593 aa30.22■■■□□ 2.43
NPLOC4-215ENST00000574095 MTA3Q9BTC8 594 aa30.22■■■□□ 2.43
NPLOC4-215ENST00000574095 PXMP2Q9NR77 195 aa30.22■■■□□ 2.43
NPLOC4-215ENST00000574095 POLR3EQ9NVU0 708 aa30.22■■■□□ 2.43
NPLOC4-215ENST00000574095 KIAA1217Q5T5P2 1943 aa30.22■■■□□ 2.43
NPLOC4-215ENST00000574095 PNMA6FA0A0J9YX94 578 aa30.21■■■□□ 2.43
NPLOC4-215ENST00000574095 SH2B2O14492 632 aaPredicted RBP30.21■■■□□ 2.43
NPLOC4-215ENST00000574095 CD4P01730 458 aa30.21■■■□□ 2.43
NPLOC4-215ENST00000574095 FPGSQ05932 587 aa30.21■■■□□ 2.43
NPLOC4-215ENST00000574095 NFXL1Q6ZNB6 911 aa30.21■■■□□ 2.43
NPLOC4-215ENST00000574095 Q7L0L9 218 aa30.21■■■□□ 2.43
NPLOC4-215ENST00000574095 TMEM87BQ96K49 555 aa30.21■■■□□ 2.43
NPLOC4-215ENST00000574095 LAMA2P24043 3122 aaKnown RBP30.2■■■□□ 2.43
NPLOC4-215ENST00000574095 DDAH1O94760 285 aa30.2■■■□□ 2.43
NPLOC4-215ENST00000574095 HOXA13P31271 388 aaPredicted RBP30.2■■■□□ 2.43
NPLOC4-215ENST00000574095 GHRHRQ02643 423 aa30.2■■■□□ 2.43
NPLOC4-215ENST00000574095 CTCFLQ8NI51 663 aaPredicted RBP30.2■■■□□ 2.43
NPLOC4-215ENST00000574095 MAP3K14Q99558 947 aa30.2■■■□□ 2.43
NPLOC4-215ENST00000574095 LRRC2Q9BYS8 371 aa30.2■■■□□ 2.43
NPLOC4-215ENST00000574095 PPP1R12CQ9BZL4 782 aa30.2■■■□□ 2.43
NPLOC4-215ENST00000574095 CCDC69A6NI79 296 aa30.19■■■□□ 2.42
NPLOC4-215ENST00000574095 CDC45O75419 566 aa30.19■■■□□ 2.42
NPLOC4-215ENST00000574095 NR3C2P08235 984 aa30.19■■■□□ 2.42
NPLOC4-215ENST00000574095 PURAQ00577 322 aaKnown RBP30.19■■■□□ 2.42
NPLOC4-215ENST00000574095 TRAF1Q13077 416 aa30.19■■■□□ 2.42
NPLOC4-215ENST00000574095 CCDC62Q6P9F0 684 aa30.19■■■□□ 2.42
NPLOC4-215ENST00000574095 TMTC2Q8N394 836 aa30.19■■■□□ 2.42
NPLOC4-215ENST00000574095 DEFB123Q8N688 67 aa30.19■■■□□ 2.42
NPLOC4-215ENST00000574095 MAP3K20Q9NYL2 800 aaKnown RBP30.19■■■□□ 2.42
NPLOC4-215ENST00000574095 LY6KQ17RY6 165 aa30.18■■■□□ 2.42
NPLOC4-215ENST00000574095 BRDTQ58F21 947 aaPredicted RBP30.18■■■□□ 2.42
NPLOC4-215ENST00000574095 MFSD5Q6N075 450 aa30.18■■■□□ 2.42
NPLOC4-215ENST00000574095 TRPV6Q9H1D0 765 aa30.18■■■□□ 2.42
NPLOC4-215ENST00000574095 A6NJR5 290 aa30.17■■■□□ 2.42
NPLOC4-215ENST00000574095 RXRAP19793 462 aa30.17■■■□□ 2.42
NPLOC4-215ENST00000574095 KIF5BP33176 963 aa30.17■■■□□ 2.42
NPLOC4-215ENST00000574095 RNF20Q5VTR2 975 aa30.17■■■□□ 2.42
NPLOC4-215ENST00000574095 MTG1Q9BT17 334 aaPredicted RBP30.17■■■□□ 2.42
NPLOC4-215ENST00000574095 SEZ6LQ9BYH1 1024 aa30.17■■■□□ 2.42
NPLOC4-215ENST00000574095 GCOM1H8Y6P7 765 aaPredicted RBP30.16■■■□□ 2.42
NPLOC4-215ENST00000574095 B4GALT4O60513 344 aa30.16■■■□□ 2.42
NPLOC4-215ENST00000574095 EIF3JO75822 258 aaKnown RBP30.16■■■□□ 2.42
NPLOC4-215ENST00000574095 POLR2MP0CAP2 368 aa30.16■■■□□ 2.42
NPLOC4-215ENST00000574095 MYCLP12524 364 aaPredicted RBP30.16■■■□□ 2.42
NPLOC4-215ENST00000574095 LIFRP42702 1097 aa30.16■■■□□ 2.42
NPLOC4-215ENST00000574095 RAB11FIP4Q86YS3 637 aa30.16■■■□□ 2.42
NPLOC4-215ENST00000574095 SAMD3Q8N6K7 520 aa30.16■■■□□ 2.42
NPLOC4-215ENST00000574095 PDCD2LQ9BRP1 358 aa30.16■■■□□ 2.42
NPLOC4-215ENST00000574095 CYP2C18P33260 490 aa30.15■■■□□ 2.42
NPLOC4-215ENST00000574095 FCHSD1Q86WN1 690 aa30.15■■■□□ 2.42
NPLOC4-215ENST00000574095 CMTR1Q8N1G2 835 aaKnown RBP30.15■■■□□ 2.42
NPLOC4-215ENST00000574095 SPZ1Q9BXG8 430 aa30.15■■■□□ 2.42
NPLOC4-215ENST00000574095 PLEKHA8P1O95397 391 aa30.14■■■□□ 2.42
NPLOC4-215ENST00000574095 GH1P01241 217 aa30.14■■■□□ 2.42
NPLOC4-215ENST00000574095 SRBD1Q8N5C6 995 aaKnown RBP30.14■■■□□ 2.42
NPLOC4-215ENST00000574095 PPP1R13LQ8WUF5 828 aa30.14■■■□□ 2.42
NPLOC4-215ENST00000574095 AFG1LQ8WV93 481 aa30.14■■■□□ 2.42
NPLOC4-215ENST00000574095 RRP36Q96EU6 259 aaKnown RBP30.14■■■□□ 2.42
NPLOC4-215ENST00000574095 RNPC3Q96LT9 517 aaKnown RBP30.14■■■□□ 2.42
NPLOC4-215ENST00000574095 NEK1Q96PY6 1258 aa30.14■■■□□ 2.42
NPLOC4-215ENST00000574095 ALDH8A1Q9H2A2 487 aaPredicted RBP30.14■■■□□ 2.42
NPLOC4-215ENST00000574095 DDX41Q9UJV9 622 aaKnown RBP30.14■■■□□ 2.42
NPLOC4-215ENST00000574095 KPNA6O60684 536 aa30.13■■■□□ 2.41
NPLOC4-215ENST00000574095 CSF2RAP15509 400 aa30.13■■■□□ 2.41
NPLOC4-215ENST00000574095 SMARCA1P28370 1054 aa30.13■■■□□ 2.41
NPLOC4-215ENST00000574095 ARHGAP1Q07960 439 aa30.13■■■□□ 2.41
NPLOC4-215ENST00000574095 PGM5Q15124 567 aa30.13■■■□□ 2.41
NPLOC4-215ENST00000574095 RASEFQ8IZ41 740 aa30.13■■■□□ 2.41
NPLOC4-215ENST00000574095 TMEM199Q8N511 208 aa30.13■■■□□ 2.41
NPLOC4-215ENST00000574095 ZFP91Q96JP5 570 aaPredicted RBP30.13■■■□□ 2.41
NPLOC4-215ENST00000574095 LZTS2Q9BRK4 669 aa30.13■■■□□ 2.41
NPLOC4-215ENST00000574095 SLC12A7Q9Y666 1083 aa30.13■■■□□ 2.41
NPLOC4-215ENST00000574095 MRVI1Q9Y6F6 885 aa30.13■■■□□ 2.41
NPLOC4-215ENST00000574095 UMODL1Q5DID0 1318 aa30.13■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms