RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 PRC1O43663 620 aa13.17□□□□□ -0.3
RPAIN-214ENST00000574003 SORBS3O60504 671 aa13.17□□□□□ -0.3
RPAIN-214ENST00000574003 CYP2C18P33260 490 aa13.17□□□□□ -0.3
RPAIN-214ENST00000574003 PPP2R5BQ15173 497 aa13.17□□□□□ -0.3
RPAIN-214ENST00000574003 RGS22Q8NE09 1264 aa13.17□□□□□ -0.3
RPAIN-214ENST00000574003 RMDN3Q96TC7 470 aa13.17□□□□□ -0.3
RPAIN-214ENST00000574003 AMNQ9BXJ7 453 aa13.17□□□□□ -0.3
RPAIN-214ENST00000574003 TRPV6Q9H1D0 765 aa13.17□□□□□ -0.3
RPAIN-214ENST00000574003 RIOX1Q9H6W3 641 aa13.17□□□□□ -0.3
RPAIN-214ENST00000574003 ZEB2O60315 1214 aa13.16□□□□□ -0.3
RPAIN-214ENST00000574003 TIMP1P01033 207 aa13.16□□□□□ -0.3
RPAIN-214ENST00000574003 CD4P01730 458 aa13.16□□□□□ -0.3
RPAIN-214ENST00000574003 ACRP10323 421 aa13.16□□□□□ -0.3
RPAIN-214ENST00000574003 TXNP10599 105 aaKnown RBP13.16□□□□□ -0.3
RPAIN-214ENST00000574003 FPGSQ05932 587 aa13.16□□□□□ -0.3
RPAIN-214ENST00000574003 NECTIN1Q15223 517 aa13.16□□□□□ -0.3
RPAIN-214ENST00000574003 LY6KQ17RY6 165 aa13.16□□□□□ -0.3
RPAIN-214ENST00000574003 BMP2KLQ5H9B9 411 aa13.16□□□□□ -0.3
RPAIN-214ENST00000574003 ARHGEF16Q5VV41 709 aa13.16□□□□□ -0.3
RPAIN-214ENST00000574003 C16orf59Q7L2K0 433 aa13.16□□□□□ -0.3
RPAIN-214ENST00000574003 ZNF654Q8IZM8 581 aa13.16□□□□□ -0.3
RPAIN-214ENST00000574003 CMTR1Q8N1G2 835 aaKnown RBP13.16□□□□□ -0.3
RPAIN-214ENST00000574003 SLC43A3Q8NBI5 491 aa13.16□□□□□ -0.3
RPAIN-214ENST00000574003 IL31RAQ8NI17 732 aa13.16□□□□□ -0.3
RPAIN-214ENST00000574003 TCEANC2Q96MN5 208 aa13.16□□□□□ -0.3
RPAIN-214ENST00000574003 Q9Y3F1 56 aa13.16□□□□□ -0.3
RPAIN-214ENST00000574003 PCDHA1Q9Y5I3 950 aa13.16□□□□□ -0.3
RPAIN-214ENST00000574003 LOC102724159A0A0B4J2E5 919 aa13.15□□□□□ -0.3
RPAIN-214ENST00000574003 SH2B2O14492 632 aaPredicted RBP13.15□□□□□ -0.3
RPAIN-214ENST00000574003 B4GALT4O60513 344 aa13.15□□□□□ -0.3
RPAIN-214ENST00000574003 PLEKHA8P1O95397 391 aa13.15□□□□□ -0.3
RPAIN-214ENST00000574003 MYCLP12524 364 aaPredicted RBP13.15□□□□□ -0.3
RPAIN-214ENST00000574003 CSF2RAP15509 400 aa13.15□□□□□ -0.3
RPAIN-214ENST00000574003 CHMP4BP1P59074 171 aa13.15□□□□□ -0.3
RPAIN-214ENST00000574003 PURAQ00577 322 aaKnown RBP13.15□□□□□ -0.3
RPAIN-214ENST00000574003 SART3Q15020 963 aaKnown RBP13.15□□□□□ -0.3
RPAIN-214ENST00000574003 PWP2Q15269 919 aaKnown RBP13.15□□□□□ -0.3
RPAIN-214ENST00000574003 CCDC62Q6P9F0 684 aa13.15□□□□□ -0.3
RPAIN-214ENST00000574003 CATIPQ7Z7H3 387 aa13.15□□□□□ -0.3
RPAIN-214ENST00000574003 MCF2L2Q86YR7 1114 aa13.15□□□□□ -0.3
RPAIN-214ENST00000574003 NSUN6Q8TEA1 469 aaKnown RBP13.15□□□□□ -0.3
RPAIN-214ENST00000574003 SCFD2Q8WU76 684 aa13.15□□□□□ -0.3
RPAIN-214ENST00000574003 RNPC3Q96LT9 517 aaKnown RBP13.15□□□□□ -0.3
RPAIN-214ENST00000574003 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.15□□□□□ -0.33e-12■□□□□ 9
RPAIN-214ENST00000574003 PXMP2Q9NR77 195 aa13.15□□□□□ -0.3
RPAIN-214ENST00000574003 TRMT13Q9NUP7 481 aaKnown RBP13.15□□□□□ -0.3
RPAIN-214ENST00000574003 MTMR10Q9NXD2 777 aa13.15□□□□□ -0.3
RPAIN-214ENST00000574003 KIAA1217Q5T5P2 1943 aa13.15□□□□□ -0.3
RPAIN-214ENST00000574003 MROH7Q68CQ1 1323 aa13.14□□□□□ -0.31
RPAIN-214ENST00000574003 hCG_1642624A0A1W2PR95 340 aa13.14□□□□□ -0.31
RPAIN-214ENST00000574003 TLR3O15455 904 aaKnown RBP13.14□□□□□ -0.31
RPAIN-214ENST00000574003 CABYRO75952 493 aa13.14□□□□□ -0.31
RPAIN-214ENST00000574003 NR3C2P08235 984 aa13.14□□□□□ -0.31
RPAIN-214ENST00000574003 CYP2C9P11712 490 aa13.14□□□□□ -0.31
RPAIN-214ENST00000574003 HSD17B4P51659 736 aa13.14□□□□□ -0.31
RPAIN-214ENST00000574003 CCL23P55773 120 aa13.14□□□□□ -0.31
RPAIN-214ENST00000574003 TTLL4Q14679 1199 aa13.14□□□□□ -0.31
RPAIN-214ENST00000574003 FAM109BQ6ICB4 259 aaPredicted RBP13.14□□□□□ -0.31
RPAIN-214ENST00000574003 MFSD5Q6N075 450 aa13.14□□□□□ -0.31
RPAIN-214ENST00000574003 CASC1Q6TDU7 716 aa13.14□□□□□ -0.31
RPAIN-214ENST00000574003 NFXL1Q6ZNB6 911 aa13.14□□□□□ -0.31
RPAIN-214ENST00000574003 FCHSD1Q86WN1 690 aa13.14□□□□□ -0.31
RPAIN-214ENST00000574003 RASEFQ8IZ41 740 aa13.14□□□□□ -0.31
RPAIN-214ENST00000574003 AFG1LQ8WV93 481 aa13.14□□□□□ -0.31
RPAIN-214ENST00000574003 GPKOWQ92917 476 aaPredicted RBP eCLIP13.14□□□□□ -0.31
RPAIN-214ENST00000574003 MPHOSPH6Q99547 160 aaKnown RBP13.14□□□□□ -0.31
RPAIN-214ENST00000574003 SCN10AQ9Y5Y9 1956 aa13.14□□□□□ -0.31
RPAIN-214ENST00000574003 MYO9BQ13459 2157 aa13.14□□□□□ -0.31
RPAIN-214ENST00000574003 COL6A3P12111 3177 aa13.14□□□□□ -0.31
RPAIN-214ENST00000574003 MYH7BA7E2Y1 1941 aa13.13□□□□□ -0.31
RPAIN-214ENST00000574003 PNMA6FA0A0J9YX94 578 aa13.13□□□□□ -0.31
RPAIN-214ENST00000574003 GRXCR1A8MXD5 290 aa13.13□□□□□ -0.31
RPAIN-214ENST00000574003 RGS20O76081 388 aa13.13□□□□□ -0.31
RPAIN-214ENST00000574003 MCM5P33992 734 aa13.13□□□□□ -0.31
RPAIN-214ENST00000574003 CPT1AP50416 773 aa13.13□□□□□ -0.31
RPAIN-214ENST00000574003 ARHGAP1Q07960 439 aa13.13□□□□□ -0.31
RPAIN-214ENST00000574003 STXBP2Q15833 593 aa13.13□□□□□ -0.31
RPAIN-214ENST00000574003 NBPF20Q3BBV1 942 aa13.13□□□□□ -0.31
RPAIN-214ENST00000574003 FAM47CQ5HY64 1035 aa13.13□□□□□ -0.31
RPAIN-214ENST00000574003 SRBD1Q8N5C6 995 aaKnown RBP13.13□□□□□ -0.31
RPAIN-214ENST00000574003 PDCD2LQ9BRP1 358 aa13.13□□□□□ -0.31
RPAIN-214ENST00000574003 MTG1Q9BT17 334 aaPredicted RBP13.13□□□□□ -0.31
RPAIN-214ENST00000574003 WNT8AQ9H1J5 351 aa13.13□□□□□ -0.31
RPAIN-214ENST00000574003 ALDH8A1Q9H2A2 487 aaPredicted RBP13.13□□□□□ -0.31
RPAIN-214ENST00000574003 POLR3EQ9NVU0 708 aa13.13□□□□□ -0.31
RPAIN-214ENST00000574003 A6NJR5 290 aa13.12□□□□□ -0.31
RPAIN-214ENST00000574003 NKRFO15226 690 aaKnown RBP eCLIP13.12□□□□□ -0.31
RPAIN-214ENST00000574003 DDAH1O94760 285 aa13.12□□□□□ -0.31
RPAIN-214ENST00000574003 PGM5Q15124 567 aa13.12□□□□□ -0.31
RPAIN-214ENST00000574003 ADCK5Q3MIX3 580 aa13.12□□□□□ -0.31
RPAIN-214ENST00000574003 TMEM240Q5SV17 173 aa13.12□□□□□ -0.31
RPAIN-214ENST00000574003 GPR153Q6NV75 609 aa13.12□□□□□ -0.31
RPAIN-214ENST00000574003 ZNF365Q70YC5 407 aa13.12□□□□□ -0.31
RPAIN-214ENST00000574003 CCDC82Q8N4S0 544 aa13.12□□□□□ -0.31
RPAIN-214ENST00000574003 SCLYQ96I15 445 aa13.12□□□□□ -0.31
RPAIN-214ENST00000574003 CCDC136Q96JN2 1154 aa13.12□□□□□ -0.31
RPAIN-214ENST00000574003 GUCD1Q96NT3 240 aa13.12□□□□□ -0.31
RPAIN-214ENST00000574003 IWS1Q96ST2 819 aa13.12□□□□□ -0.31
RPAIN-214ENST00000574003 NOC4LQ9BVI4 516 aaKnown RBP13.12□□□□□ -0.31
RPAIN-214ENST00000574003 HIPK3Q9H422 1215 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms