RNA–Protein interactions for RNA: ENST00000573236.5

PAM16-206, Transcript of presequence translocase associated motor 16, humanhuman

TSL 1 (best)

Gene PAM16, Length 704 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAM16-206ENST00000573236 SMARCA1P28370 1054 aa17.95■□□□□ 0.46
PAM16-206ENST00000573236 HOXA13P31271 388 aaPredicted RBP17.95■□□□□ 0.46
PAM16-206ENST00000573236 GNAQP50148 359 aa17.95■□□□□ 0.46
PAM16-206ENST00000573236 MRPL12P52815 198 aaKnown RBP17.95■□□□□ 0.46
PAM16-206ENST00000573236 FSCN1Q16658 493 aaKnown RBP17.95■□□□□ 0.46
PAM16-206ENST00000573236 MICU3Q86XE3 530 aa17.95■□□□□ 0.46
PAM16-206ENST00000573236 LZTS2Q9BRK4 669 aa17.95■□□□□ 0.46
PAM16-206ENST00000573236 BRPF3Q9ULD4 1205 aa17.95■□□□□ 0.46
PAM16-206ENST00000573236 SNX14Q9Y5W7 946 aa17.95■□□□□ 0.46
PAM16-206ENST00000573236 MDM2Q00987 491 aaPredicted RBP17.94■□□□□ 0.46
PAM16-206ENST00000573236 TRAF1Q13077 416 aa17.94■□□□□ 0.46
PAM16-206ENST00000573236 ARHGEF16Q5VV41 709 aa17.94■□□□□ 0.46
PAM16-206ENST00000573236 FANCBQ8NB91 859 aa17.94■□□□□ 0.46
PAM16-206ENST00000573236 COPS5Q92905 334 aa17.94■□□□□ 0.46
PAM16-206ENST00000573236 RRP36Q96EU6 259 aaKnown RBP17.94■□□□□ 0.46
PAM16-206ENST00000573236 GLT1D1Q96MS3 346 aa17.94■□□□□ 0.46
PAM16-206ENST00000573236 JAKMIP1Q96N16 626 aaKnown RBP17.94■□□□□ 0.46
PAM16-206ENST00000573236 PRDM5Q9NQX1 630 aaPredicted RBP17.94■□□□□ 0.46
PAM16-206ENST00000573236 PDLIM7Q9NR12 457 aa17.94■□□□□ 0.46
PAM16-206ENST00000573236 PXMP2Q9NR77 195 aa17.94■□□□□ 0.46
PAM16-206ENST00000573236 Q9Y3F1 56 aa17.94■□□□□ 0.46
PAM16-206ENST00000573236 LAMA3Q16787 3333 aa17.93■□□□□ 0.46
PAM16-206ENST00000573236 PQBP1O60828 265 aaKnown RBP17.93■□□□□ 0.46
PAM16-206ENST00000573236 ARIH2O95376 493 aa17.93■□□□□ 0.46
PAM16-206ENST00000573236 APOA5Q6Q788 366 aa17.93■□□□□ 0.46
PAM16-206ENST00000573236 CXCL17Q6UXB2 119 aa17.93■□□□□ 0.46
PAM16-206ENST00000573236 TMTC3Q6ZXV5 915 aa17.93■□□□□ 0.46
PAM16-206ENST00000573236 SH3RF1Q7Z6J0 888 aa17.93■□□□□ 0.46
PAM16-206ENST00000573236 CCDC82Q8N4S0 544 aa17.93■□□□□ 0.46
PAM16-206ENST00000573236 SCFD2Q8WU76 684 aa17.93■□□□□ 0.46
PAM16-206ENST00000573236 VTI1AQ96AJ9 217 aa17.93■□□□□ 0.46
PAM16-206ENST00000573236 IWS1Q96ST2 819 aa17.93■□□□□ 0.46
PAM16-206ENST00000573236 MAP3K20Q9NYL2 800 aaKnown RBP17.93■□□□□ 0.46
PAM16-206ENST00000573236 ELP1O95163 1332 aa17.93■□□□□ 0.46
PAM16-206ENST00000573236 KIAA1217Q5T5P2 1943 aa17.92■□□□□ 0.46
PAM16-206ENST00000573236 hCG_1642624A0A1W2PR95 340 aa17.92■□□□□ 0.46
PAM16-206ENST00000573236 TRIM43BA6NCK2 446 aa17.92■□□□□ 0.46
PAM16-206ENST00000573236 GCOM1H8Y6P7 765 aaPredicted RBP17.92■□□□□ 0.46
PAM16-206ENST00000573236 NR3C2P08235 984 aa17.92■□□□□ 0.46
PAM16-206ENST00000573236 HMGB1P09429 215 aaKnown RBP17.92■□□□□ 0.46
PAM16-206ENST00000573236 POLR2MP0CAP2 368 aa17.92■□□□□ 0.46
PAM16-206ENST00000573236 BMP8BP34820 402 aa17.92■□□□□ 0.46
PAM16-206ENST00000573236 FXR1P51114 621 aaKnown RBP eCLIP17.92■□□□□ 0.46
PAM16-206ENST00000573236 PPP2R5BQ15173 497 aa17.92■□□□□ 0.46
PAM16-206ENST00000573236 STXBP2Q15833 593 aa17.92■□□□□ 0.46
PAM16-206ENST00000573236 SYNE3Q6ZMZ3 975 aa17.92■□□□□ 0.46
PAM16-206ENST00000573236 SEPT14Q6ZU15 432 aa17.92■□□□□ 0.46
PAM16-206ENST00000573236 OR6J1Q8NGC5 347 aa17.92■□□□□ 0.46
PAM16-206ENST00000573236 TRIM43Q96BQ3 446 aaPredicted RBP17.92■□□□□ 0.46
PAM16-206ENST00000573236 PRKAG2Q9UGJ0 569 aa17.92■□□□□ 0.46
PAM16-206ENST00000573236 SEC63Q9UGP8 760 aaKnown RBP17.92■□□□□ 0.46
PAM16-206ENST00000573236 LTBP2Q14767 1821 aa17.91■□□□□ 0.46
PAM16-206ENST00000573236 A0A0U1RQG5 324 aaPredicted RBP17.91■□□□□ 0.46
PAM16-206ENST00000573236 KLF18A0A0U1RQI7 1052 aa17.91■□□□□ 0.46
PAM16-206ENST00000573236 ZBTB43O43298 467 aa17.91■□□□□ 0.46
PAM16-206ENST00000573236 TXNP10599 105 aaKnown RBP17.91■□□□□ 0.46
PAM16-206ENST00000573236 CDK7P50613 346 aa17.91■□□□□ 0.46
PAM16-206ENST00000573236 TTLL4Q14679 1199 aa17.91■□□□□ 0.46
PAM16-206ENST00000573236 ANKRD33Q7Z3H0 272 aa17.91■□□□□ 0.46
PAM16-206ENST00000573236 FCHSD1Q86WN1 690 aa17.91■□□□□ 0.46
PAM16-206ENST00000573236 SAMD3Q8N6K7 520 aa17.91■□□□□ 0.46
PAM16-206ENST00000573236 PDCD2LQ9BRP1 358 aa17.91■□□□□ 0.46
PAM16-206ENST00000573236 SZT2Q5T011 3432 aa17.91■□□□□ 0.46
PAM16-206ENST00000573236 NKRFO15226 690 aaKnown RBP eCLIP17.9■□□□□ 0.46
PAM16-206ENST00000573236 ZEB2O60315 1214 aa17.9■□□□□ 0.46
PAM16-206ENST00000573236 CLTBP09497 229 aa17.9■□□□□ 0.46
PAM16-206ENST00000573236 MYCLP12524 364 aaPredicted RBP17.9■□□□□ 0.46
PAM16-206ENST00000573236 FAAP100Q0VG06 881 aa17.9■□□□□ 0.46
PAM16-206ENST00000573236 CCDC62Q6P9F0 684 aa17.9■□□□□ 0.46
PAM16-206ENST00000573236 BLOC1S2Q6QNY1 142 aa17.9■□□□□ 0.46
PAM16-206ENST00000573236 Q6ZUG5 572 aa17.9■□□□□ 0.46
PAM16-206ENST00000573236 IL31RAQ8NI17 732 aa17.9■□□□□ 0.46
PAM16-206ENST00000573236 TOX2Q96NM4 488 aa17.9■□□□□ 0.46
PAM16-206ENST00000573236 LBHD1Q9BQE6 289 aaPredicted RBP17.9■□□□□ 0.46
PAM16-206ENST00000573236 UBE2OQ9C0C9 1292 aaKnown RBP17.9■□□□□ 0.46
PAM16-206ENST00000573236 A0A1W2PPC1 479 aa17.89■□□□□ 0.45
PAM16-206ENST00000573236 ARVCFO00192 962 aa17.89■□□□□ 0.45
PAM16-206ENST00000573236 EIF3JO75822 258 aaKnown RBP17.89■□□□□ 0.45
PAM16-206ENST00000573236 CABYRO75952 493 aa17.89■□□□□ 0.45
PAM16-206ENST00000573236 ITGB8P26012 769 aa17.89■□□□□ 0.45
PAM16-206ENST00000573236 FGD1P98174 961 aa17.89■□□□□ 0.45
PAM16-206ENST00000573236 APOBRQ0VD83 1088 aa17.89■□□□□ 0.45
PAM16-206ENST00000573236 PGM5Q15124 567 aa17.89■□□□□ 0.45
PAM16-206ENST00000573236 RTN1Q16799 776 aa17.89■□□□□ 0.45
PAM16-206ENST00000573236 LY6KQ17RY6 165 aa17.89■□□□□ 0.45
PAM16-206ENST00000573236 ZFP91Q96JP5 570 aaPredicted RBP17.89■□□□□ 0.45
PAM16-206ENST00000573236 USP26Q9BXU7 913 aa17.89■□□□□ 0.45
PAM16-206ENST00000573236 FAM217BQ9NTX9 383 aaPredicted RBP17.89■□□□□ 0.45
PAM16-206ENST00000573236 RBM28Q9NW13 759 aaKnown RBP17.89■□□□□ 0.45
PAM16-206ENST00000573236 GRIN2DO15399 1336 aa17.89■□□□□ 0.45
PAM16-206ENST00000573236 CNTNAP5Q8WYK1 1306 aa17.89■□□□□ 0.45
PAM16-206ENST00000573236 GOLGA8AA7E2F4 631 aa17.88■□□□□ 0.45
PAM16-206ENST00000573236 GOLGA8BA8MQT2 603 aa17.88■□□□□ 0.45
PAM16-206ENST00000573236 DCDC2CA8MYV0 355 aa17.88■□□□□ 0.45
PAM16-206ENST00000573236 KIAA0355O15063 1070 aa17.88■□□□□ 0.45
PAM16-206ENST00000573236 EPB41L2O43491 1005 aaKnown RBP17.88■□□□□ 0.45
PAM16-206ENST00000573236 RGS20O76081 388 aa17.88■□□□□ 0.45
PAM16-206ENST00000573236 MYL3P08590 195 aa17.88■□□□□ 0.45
PAM16-206ENST00000573236 CASTP20810 708 aaKnown RBP17.88■□□□□ 0.45
PAM16-206ENST00000573236 RPS6KB1P23443 525 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms