RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 ZNF654Q8IZM8 581 aa20.13■□□□□ 0.81
SMG6-212ENST00000573153 CCDC136Q96JN2 1154 aa20.13■□□□□ 0.81
SMG6-212ENST00000573153 MAP3K14Q99558 947 aa20.13■□□□□ 0.81
SMG6-212ENST00000573153 AP5M1Q9H0R1 490 aa20.13■□□□□ 0.81
SMG6-212ENST00000573153 PXMP2Q9NR77 195 aa20.13■□□□□ 0.81
SMG6-212ENST00000573153 UMODL1Q5DID0 1318 aa20.12■□□□□ 0.81
SMG6-212ENST00000573153 MROH7Q68CQ1 1323 aa20.12■□□□□ 0.81
SMG6-212ENST00000573153 A6NJR5 290 aa20.12■□□□□ 0.81
SMG6-212ENST00000573153 DCDC2CA8MYV0 355 aa20.12■□□□□ 0.81
SMG6-212ENST00000573153 DHX16O60231 1041 aaKnown RBP20.12■□□□□ 0.81
SMG6-212ENST00000573153 TIMP1P01033 207 aa20.12■□□□□ 0.81
SMG6-212ENST00000573153 ITGA7Q13683 1181 aa20.12■□□□□ 0.81
SMG6-212ENST00000573153 SART3Q15020 963 aaKnown RBP20.12■□□□□ 0.81
SMG6-212ENST00000573153 IL31RAQ8NI17 732 aa20.12■□□□□ 0.81
SMG6-212ENST00000573153 SCFD2Q8WU76 684 aa20.12■□□□□ 0.81
SMG6-212ENST00000573153 RMDN3Q96TC7 470 aa20.12■□□□□ 0.81
SMG6-212ENST00000573153 FRMPD4Q14CM0 1322 aa20.11■□□□□ 0.81
SMG6-212ENST00000573153 B4GALT4O60513 344 aa20.11■□□□□ 0.81
SMG6-212ENST00000573153 DDAH1O94760 285 aa20.11■□□□□ 0.81
SMG6-212ENST00000573153 RAG1P15918 1043 aa20.11■□□□□ 0.81
SMG6-212ENST00000573153 ARHGAP1Q07960 439 aa20.11■□□□□ 0.81
SMG6-212ENST00000573153 PPP2R5BQ15173 497 aa20.11■□□□□ 0.81
SMG6-212ENST00000573153 HOMER1Q86YM7 354 aa20.11■□□□□ 0.81
SMG6-212ENST00000573153 MCF2L2Q86YR7 1114 aa20.11■□□□□ 0.81
SMG6-212ENST00000573153 RASEFQ8IZ41 740 aa20.11■□□□□ 0.81
SMG6-212ENST00000573153 OR6J1Q8NGC5 347 aa20.11■□□□□ 0.81
SMG6-212ENST00000573153 NSUN6Q8TEA1 469 aaKnown RBP20.11■□□□□ 0.81
SMG6-212ENST00000573153 IWS1Q96ST2 819 aa20.11■□□□□ 0.81
SMG6-212ENST00000573153 PDCD2LQ9BRP1 358 aa20.11■□□□□ 0.81
SMG6-212ENST00000573153 SPZ1Q9BXG8 430 aa20.11■□□□□ 0.81
SMG6-212ENST00000573153 ANO2Q9NQ90 1003 aa20.11■□□□□ 0.81
SMG6-212ENST00000573153 PCDHA1Q9Y5I3 950 aa20.11■□□□□ 0.81
SMG6-212ENST00000573153 ERICH2A1L162 156 aa20.1■□□□□ 0.81
SMG6-212ENST00000573153 NKRFO15226 690 aaKnown RBP eCLIP20.1■□□□□ 0.81
SMG6-212ENST00000573153 PLEKHA8P1O95397 391 aa20.1■□□□□ 0.81
SMG6-212ENST00000573153 CFBP00751 764 aa20.1■□□□□ 0.81
SMG6-212ENST00000573153 EIF2AK2P19525 551 aaKnown RBP20.1■□□□□ 0.81
SMG6-212ENST00000573153 LIFRP42702 1097 aa20.1■□□□□ 0.81
SMG6-212ENST00000573153 RASIP1Q5U651 963 aa20.1■□□□□ 0.81
SMG6-212ENST00000573153 MFSD5Q6N075 450 aa20.1■□□□□ 0.81
SMG6-212ENST00000573153 PNMA6FA0A0J9YX94 578 aa20.09■□□□□ 0.81
SMG6-212ENST00000573153 NR3C2P08235 984 aa20.09■□□□□ 0.81
SMG6-212ENST00000573153 TXNP10599 105 aaKnown RBP20.09■□□□□ 0.81
SMG6-212ENST00000573153 HOXA13P31271 388 aaPredicted RBP20.09■□□□□ 0.81
SMG6-212ENST00000573153 EXOSC10Q01780 885 aaKnown RBP20.09■□□□□ 0.81
SMG6-212ENST00000573153 FPGSQ05932 587 aa20.09■□□□□ 0.81
SMG6-212ENST00000573153 ADCK5Q3MIX3 580 aa20.09■□□□□ 0.81
SMG6-212ENST00000573153 TSGA10IPQ3SY00 556 aa20.09■□□□□ 0.81
SMG6-212ENST00000573153 CATIPQ7Z7H3 387 aa20.09■□□□□ 0.81
SMG6-212ENST00000573153 SGMS1Q86VZ5 419 aa20.09■□□□□ 0.81
SMG6-212ENST00000573153 SRBD1Q8N5C6 995 aaKnown RBP20.09■□□□□ 0.81
SMG6-212ENST00000573153 TMEM87BQ96K49 555 aa20.09■□□□□ 0.81
SMG6-212ENST00000573153 CTAGE1Q96RT6 745 aa20.09■□□□□ 0.81
SMG6-212ENST00000573153 LRRC2Q9BYS8 371 aa20.09■□□□□ 0.81
SMG6-212ENST00000573153 TRPV6Q9H1D0 765 aa20.09■□□□□ 0.81
SMG6-212ENST00000573153 WNT8AQ9H1J5 351 aa20.09■□□□□ 0.81
SMG6-212ENST00000573153 MTMR10Q9NXD2 777 aa20.09■□□□□ 0.81
SMG6-212ENST00000573153 MAP3K20Q9NYL2 800 aaKnown RBP20.09■□□□□ 0.81
SMG6-212ENST00000573153 CDC45O75419 566 aa20.08■□□□□ 0.81
SMG6-212ENST00000573153 RXRAP19793 462 aa20.08■□□□□ 0.81
SMG6-212ENST00000573153 SMARCA1P28370 1054 aa20.08■□□□□ 0.81
SMG6-212ENST00000573153 MCM5P33992 734 aa20.08■□□□□ 0.81
SMG6-212ENST00000573153 TTLL4Q14679 1199 aa20.08■□□□□ 0.81
SMG6-212ENST00000573153 PGM5Q15124 567 aa20.08■□□□□ 0.81
SMG6-212ENST00000573153 LY6KQ17RY6 165 aa20.08■□□□□ 0.81
SMG6-212ENST00000573153 SAMD3Q8N6K7 520 aa20.08■□□□□ 0.81
SMG6-212ENST00000573153 PPP1R13LQ8WUF5 828 aa20.08■□□□□ 0.81
SMG6-212ENST00000573153 KCNB2Q92953 911 aa20.08■□□□□ 0.81
SMG6-212ENST00000573153 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.08■□□□□ 0.81
SMG6-212ENST00000573153 NOC4LQ9BVI4 516 aaKnown RBP20.08■□□□□ 0.81
SMG6-212ENST00000573153 PPP1R12CQ9BZL4 782 aa20.08■□□□□ 0.81
SMG6-212ENST00000573153 ALDH8A1Q9H2A2 487 aaPredicted RBP20.08■□□□□ 0.81
SMG6-212ENST00000573153 DDX41Q9UJV9 622 aaKnown RBP20.08■□□□□ 0.81
SMG6-212ENST00000573153 CDH23Q9H251 3354 aa20.08■□□□□ 0.8
SMG6-212ENST00000573153 ZEB2O60315 1214 aa20.07■□□□□ 0.8
SMG6-212ENST00000573153 CSF2RAP15509 400 aa20.07■□□□□ 0.8
SMG6-212ENST00000573153 CPT1AP50416 773 aa20.07■□□□□ 0.8
SMG6-212ENST00000573153 STXBP2Q15833 593 aa20.07■□□□□ 0.8
SMG6-212ENST00000573153 FAM109BQ6ICB4 259 aaPredicted RBP20.07■□□□□ 0.8
SMG6-212ENST00000573153 CASC1Q6TDU7 716 aa20.07■□□□□ 0.8
SMG6-212ENST00000573153 SEPT14Q6ZU15 432 aa20.07■□□□□ 0.8
SMG6-212ENST00000573153 VSIG10LQ86VR7 867 aa20.07■□□□□ 0.8
SMG6-212ENST00000573153 RAB11FIP4Q86YS3 637 aa20.07■□□□□ 0.8
SMG6-212ENST00000573153 DEFB123Q8N688 67 aa20.07■□□□□ 0.8
SMG6-212ENST00000573153 KAT2BQ92831 832 aa20.07■□□□□ 0.8
SMG6-212ENST00000573153 VTI1AQ96AJ9 217 aa20.07■□□□□ 0.8
SMG6-212ENST00000573153 GUCD1Q96NT3 240 aa20.07■□□□□ 0.8
SMG6-212ENST00000573153 POLR3EQ9NVU0 708 aa20.07■□□□□ 0.8
SMG6-212ENST00000573153 EIF3JO75822 258 aaKnown RBP20.06■□□□□ 0.8
SMG6-212ENST00000573153 MMP3P08254 477 aa20.06■□□□□ 0.8
SMG6-212ENST00000573153 HOXD8P13378 290 aaPredicted RBP20.06■□□□□ 0.8
SMG6-212ENST00000573153 CYP2C18P33260 490 aa20.06■□□□□ 0.8
SMG6-212ENST00000573153 TMEM240Q5SV17 173 aa20.06■□□□□ 0.8
SMG6-212ENST00000573153 ARHGEF16Q5VV41 709 aa20.06■□□□□ 0.8
SMG6-212ENST00000573153 CMTR1Q8N1G2 835 aaKnown RBP20.06■□□□□ 0.8
SMG6-212ENST00000573153 TMTC2Q8N394 836 aa20.06■□□□□ 0.8
SMG6-212ENST00000573153 AFG1LQ8WV93 481 aa20.06■□□□□ 0.8
SMG6-212ENST00000573153 GPKOWQ92917 476 aaPredicted RBP eCLIP20.06■□□□□ 0.8
SMG6-212ENST00000573153 EMID1Q96A84 441 aaPredicted RBP20.06■□□□□ 0.8
SMG6-212ENST00000573153 MPHOSPH6Q99547 160 aaKnown RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms