RNA–Protein interactions for RNA: ENST00000572665.1

CIITA-208, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-208ENST00000572665 MAP4K4O95819 1239 aaPredicted RBP11.37□□□□□ -0.59
CIITA-208ENST00000572665 RECKO95980 971 aa11.37□□□□□ -0.59
CIITA-208ENST00000572665 RARSP54136 660 aaKnown RBP11.37□□□□□ -0.59
CIITA-208ENST00000572665 GSTO1P78417 241 aa11.37□□□□□ -0.59
CIITA-208ENST00000572665 PCSK7Q16549 785 aa11.37□□□□□ -0.59
CIITA-208ENST00000572665 NOL9Q5SY16 702 aaKnown RBP11.37□□□□□ -0.59
CIITA-208ENST00000572665 GORABQ5T7V8 394 aa11.37□□□□□ -0.59
CIITA-208ENST00000572665 KIAA0319Q5VV43 1072 aa11.37□□□□□ -0.59
CIITA-208ENST00000572665 ANKRD23Q86SG2 305 aa11.37□□□□□ -0.59
CIITA-208ENST00000572665 IRF7Q92985 503 aa11.37□□□□□ -0.59
CIITA-208ENST00000572665 SUV39H2Q9H5I1 410 aa11.37□□□□□ -0.59
CIITA-208ENST00000572665 PICK1Q9NRD5 415 aa11.37□□□□□ -0.59
CIITA-208ENST00000572665 ABCF2Q9UG63 623 aa11.37□□□□□ -0.59
CIITA-208ENST00000572665 ZNF112Q9UJU3 913 aa11.37□□□□□ -0.59
CIITA-208ENST00000572665 BTBD19C9JJ37 291 aa11.36□□□□□ -0.59
CIITA-208ENST00000572665 CXCL11O14625 94 aa11.36□□□□□ -0.59
CIITA-208ENST00000572665 GIPC1O14908 333 aa11.36□□□□□ -0.59
CIITA-208ENST00000572665 LDHCP07864 332 aa11.36□□□□□ -0.59
CIITA-208ENST00000572665 PHKA1P46020 1223 aa11.36□□□□□ -0.59
CIITA-208ENST00000572665 LACTBP83111 547 aaPredicted RBP11.36□□□□□ -0.59
CIITA-208ENST00000572665 TBC1D8BQ0IIM8 1120 aa11.36□□□□□ -0.59
CIITA-208ENST00000572665 MTX1Q13505 466 aa11.36□□□□□ -0.59
CIITA-208ENST00000572665 SLC4A8Q2Y0W8 1093 aa11.36□□□□□ -0.59
CIITA-208ENST00000572665 FASTKD5Q7L8L6 764 aaKnown RBP11.36□□□□□ -0.59
CIITA-208ENST00000572665 CEP120Q8N960 986 aa11.36□□□□□ -0.59
CIITA-208ENST00000572665 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.36□□□□□ -0.59
CIITA-208ENST00000572665 PARK7Q99497 189 aaKnown RBP11.36□□□□□ -0.59
CIITA-208ENST00000572665 MEIS3Q99687 375 aa11.36□□□□□ -0.59
CIITA-208ENST00000572665 MDFIQ99750 246 aa11.36□□□□□ -0.59
CIITA-208ENST00000572665 IDI2Q9BXS1 227 aa11.36□□□□□ -0.59
CIITA-208ENST00000572665 OSBPL7Q9BZF2 842 aa11.36□□□□□ -0.59
CIITA-208ENST00000572665 C12orf49Q9H741 205 aa11.36□□□□□ -0.59
CIITA-208ENST00000572665 VTI1BQ9UEU0 232 aa11.36□□□□□ -0.59
CIITA-208ENST00000572665 A0A1B0GUL7 405 aa11.35□□□□□ -0.59
CIITA-208ENST00000572665 ADARB2-AS1A8MUL3 147 aa11.35□□□□□ -0.59
CIITA-208ENST00000572665 PDHXO00330 501 aa11.35□□□□□ -0.59
CIITA-208ENST00000572665 GNAI2P04899 355 aa11.35□□□□□ -0.59
CIITA-208ENST00000572665 ACPPP15309 386 aa11.35□□□□□ -0.59
CIITA-208ENST00000572665 KRT76Q01546 638 aa11.35□□□□□ -0.59
CIITA-208ENST00000572665 G3BP1Q13283 466 aaKnown RBP eCLIP11.35□□□□□ -0.59
CIITA-208ENST00000572665 FCHSD1Q86WN1 690 aa11.35□□□□□ -0.59
CIITA-208ENST00000572665 ZNF333Q96JL9 665 aa11.35□□□□□ -0.59
CIITA-208ENST00000572665 NEUROD6Q96NK8 337 aa11.35□□□□□ -0.59
CIITA-208ENST00000572665 CNTNAP3BQ96NU0 1288 aa11.35□□□□□ -0.59
CIITA-208ENST00000572665 NOL10Q9BSC4 688 aaKnown RBP11.35□□□□□ -0.59
CIITA-208ENST00000572665 BCO2Q9BYV7 579 aa11.35□□□□□ -0.59
CIITA-208ENST00000572665 CNTNAP3Q9BZ76 1288 aa11.35□□□□□ -0.59
CIITA-208ENST00000572665 PA2G4Q9UQ80 394 aaKnown RBP11.35□□□□□ -0.59
CIITA-208ENST00000572665 GAKO14976 1311 aa11.35□□□□□ -0.59
CIITA-208ENST00000572665 IGSF3O75054 1194 aa11.34□□□□□ -0.59
CIITA-208ENST00000572665 EIF4BP23588 611 aaKnown RBP11.34□□□□□ -0.59
CIITA-208ENST00000572665 ADH7P40394 386 aa11.34□□□□□ -0.59
CIITA-208ENST00000572665 RGS3P49796 1198 aa11.34□□□□□ -0.59
CIITA-208ENST00000572665 TIMM10P62072 90 aa11.34□□□□□ -0.59
CIITA-208ENST00000572665 NFIAQ12857 509 aa11.34□□□□□ -0.59
CIITA-208ENST00000572665 RASGRF1Q13972 1273 aa11.34□□□□□ -0.59
CIITA-208ENST00000572665 GRM2Q14416 872 aa11.34□□□□□ -0.59
CIITA-208ENST00000572665 ATF7IPQ6VMQ6 1270 aa11.34□□□□□ -0.59
CIITA-208ENST00000572665 HFE2Q6ZVN8 426 aa11.34□□□□□ -0.59
CIITA-208ENST00000572665 SCYL3Q8IZE3 742 aa11.34□□□□□ -0.59
CIITA-208ENST00000572665 ZKSCAN3Q9BRR0 538 aa11.34□□□□□ -0.59
CIITA-208ENST00000572665 EHD4Q9H223 541 aa11.34□□□□□ -0.59
CIITA-208ENST00000572665 SLC6A14Q9UN76 642 aa11.34□□□□□ -0.59
CIITA-208ENST00000572665 PTCH2Q9Y6C5 1203 aa11.34□□□□□ -0.59
CIITA-208ENST00000572665 TNRC18O15417 2968 aaPredicted RBP11.34□□□□□ -0.59
CIITA-208ENST00000572665 DOCK1Q14185 1865 aa11.34□□□□□ -0.59
CIITA-208ENST00000572665 MROH7-TTC4A0A0A0MT08 1334 aa11.34□□□□□ -0.59
CIITA-208ENST00000572665 J3QW42 95 aa11.33□□□□□ -0.6
CIITA-208ENST00000572665 CTNND1O60716 968 aaKnown RBP11.33□□□□□ -0.6
CIITA-208ENST00000572665 UQCRFS1P1P0C7P4 283 aa11.33□□□□□ -0.6
CIITA-208ENST00000572665 ADORA1P30542 326 aa11.33□□□□□ -0.6
CIITA-208ENST00000572665 BTDP43251 543 aa11.33□□□□□ -0.6
CIITA-208ENST00000572665 SRSF11Q05519 484 aaKnown RBP11.33□□□□□ -0.6
CIITA-208ENST00000572665 TFCP2Q12800 502 aa11.33□□□□□ -0.6
CIITA-208ENST00000572665 TSNAXIP1Q2TAA8 658 aa11.33□□□□□ -0.6
CIITA-208ENST00000572665 NXPE4Q6UWF7 544 aa11.33□□□□□ -0.6
CIITA-208ENST00000572665 C17orf99Q6UX52 265 aa11.33□□□□□ -0.6
CIITA-208ENST00000572665 RAET1EQ8TD07 263 aa11.33□□□□□ -0.6
CIITA-208ENST00000572665 FRAT1Q92837 279 aaPredicted RBP11.33□□□□□ -0.6
CIITA-208ENST00000572665 SPACA7Q96KW9 195 aa11.33□□□□□ -0.6
CIITA-208ENST00000572665 OSMRQ99650 979 aa11.33□□□□□ -0.6
CIITA-208ENST00000572665 DZANK1Q9NVP4 752 aa11.33□□□□□ -0.6
CIITA-208ENST00000572665 SLC45A1Q9Y2W3 748 aa11.33□□□□□ -0.6
CIITA-208ENST00000572665 CAPN2P17655 700 aa11.32□□□□□ -0.6
CIITA-208ENST00000572665 PSMC4P43686 418 aa11.32□□□□□ -0.6
CIITA-208ENST00000572665 FCGRTP55899 365 aa11.32□□□□□ -0.6
CIITA-208ENST00000572665 UBXN2AP68543 259 aa11.32□□□□□ -0.6
CIITA-208ENST00000572665 PICALMQ13492 652 aa11.32□□□□□ -0.6
CIITA-208ENST00000572665 ZKSCAN2Q63HK3 967 aa11.32□□□□□ -0.6
CIITA-208ENST00000572665 GOLGA6L1Q8N7Z2 621 aa11.32□□□□□ -0.6
CIITA-208ENST00000572665 SPATA5Q8NB90 893 aa11.32□□□□□ -0.6
CIITA-208ENST00000572665 GLIS3Q8NEA6 775 aa11.32□□□□□ -0.6
CIITA-208ENST00000572665 OXCT2Q9BYC2 517 aaPredicted RBP11.32□□□□□ -0.6
CIITA-208ENST00000572665 BACH2Q9BYV9 841 aa11.32□□□□□ -0.6
CIITA-208ENST00000572665 CPA4Q9UI42 421 aa11.32□□□□□ -0.6
CIITA-208ENST00000572665 ZHX2Q9Y6X8 837 aa11.32□□□□□ -0.6
CIITA-208ENST00000572665 MGAMO43451 1857 aa11.32□□□□□ -0.6
CIITA-208ENST00000572665 GPR75-ASB3A0A0A6YYF3 556 aa11.31□□□□□ -0.6
CIITA-208ENST00000572665 A0A0G2JLL6 359 aaPredicted RBP11.31□□□□□ -0.6
CIITA-208ENST00000572665 BAG3O95817 575 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms