RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 SLC12A6Q9UHW9 1150 aa18.61■□□□□ 0.57
LITAF-209ENST00000571688 AKR1B10O60218 316 aa18.61■□□□□ 0.57
LITAF-209ENST00000571688 ANKRD40Q6AI12 368 aa18.61■□□□□ 0.57
LITAF-209ENST00000571688 TLDC1Q6P9B6 456 aa18.61■□□□□ 0.57
LITAF-209ENST00000571688 TMTC3Q6ZXV5 915 aa18.61■□□□□ 0.57
LITAF-209ENST00000571688 CATIPQ7Z7H3 387 aa18.61■□□□□ 0.57
LITAF-209ENST00000571688 CEP57Q86XR8 500 aa18.61■□□□□ 0.57
LITAF-209ENST00000571688 HAUS2Q9NVX0 235 aa18.61■□□□□ 0.57
LITAF-209ENST00000571688 SIK3Q9Y2K2 1263 aa18.61■□□□□ 0.57
LITAF-209ENST00000571688 ANKRD18BA2A2Z9 1011 aa18.6■□□□□ 0.57
LITAF-209ENST00000571688 EPHB6O15197 1021 aa18.6■□□□□ 0.57
LITAF-209ENST00000571688 NKRFO15226 690 aaKnown RBP eCLIP18.6■□□□□ 0.57
LITAF-209ENST00000571688 TRAPPC3O43617 180 aa18.6■□□□□ 0.57
LITAF-209ENST00000571688 CDC37Q16543 378 aaPredicted RBP18.6■□□□□ 0.57
LITAF-209ENST00000571688 LACTB2Q53H82 288 aaPredicted RBP18.6■□□□□ 0.57
LITAF-209ENST00000571688 MAATS1Q7Z4T9 603 aa18.6■□□□□ 0.57
LITAF-209ENST00000571688 RNF10Q8N5U6 811 aaKnown RBP18.6■□□□□ 0.57
LITAF-209ENST00000571688 NOX5Q96PH1 765 aa18.6■□□□□ 0.57
LITAF-209ENST00000571688 CARD10Q9BWT7 1032 aa18.6■□□□□ 0.57
LITAF-209ENST00000571688 C5orf60A6NFR6 353 aa18.6■□□□□ 0.57
LITAF-209ENST00000571688 EZRP15311 586 aaKnown RBP18.6■□□□□ 0.57
LITAF-209ENST00000571688 HPDP32754 393 aaPredicted RBP18.6■□□□□ 0.57
LITAF-209ENST00000571688 TROAPQ12815 778 aa18.6■□□□□ 0.57
LITAF-209ENST00000571688 SYNE4Q8N205 404 aa18.6■□□□□ 0.57
LITAF-209ENST00000571688 ZSCAN10Q96SZ4 725 aaPredicted RBP18.6■□□□□ 0.57
LITAF-209ENST00000571688 ATP6V0A4Q9HBG4 840 aa18.6■□□□□ 0.57
LITAF-209ENST00000571688 GRID2IPA4D2P6 1211 aa18.59■□□□□ 0.57
LITAF-209ENST00000571688 FGFR2P21802 821 aa18.59■□□□□ 0.57
LITAF-209ENST00000571688 XRCC4Q13426 336 aa18.59■□□□□ 0.57
LITAF-209ENST00000571688 RASGRF1Q13972 1273 aa18.59■□□□□ 0.57
LITAF-209ENST00000571688 ASTE1Q2TB18 679 aaPredicted RBP18.59■□□□□ 0.57
LITAF-209ENST00000571688 ANAPC4Q9UJX5 808 aa18.59■□□□□ 0.57
LITAF-209ENST00000571688 GOLGA6L10A6NI86 522 aa18.59■□□□□ 0.57
LITAF-209ENST00000571688 ADAMTS3O15072 1205 aa18.59■□□□□ 0.57
LITAF-209ENST00000571688 NLRP5P59047 1200 aa18.59■□□□□ 0.57
LITAF-209ENST00000571688 IFFO1Q0D2I5 559 aa18.59■□□□□ 0.57
LITAF-209ENST00000571688 BYSLQ13895 437 aaKnown RBP18.59■□□□□ 0.57
LITAF-209ENST00000571688 QPCTQ16769 361 aa18.59■□□□□ 0.57
LITAF-209ENST00000571688 IFIT1BQ5T764 474 aaKnown RBP18.59■□□□□ 0.57
LITAF-209ENST00000571688 TBC1D22AQ8WUA7 517 aa18.59■□□□□ 0.57
LITAF-209ENST00000571688 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.59■□□□□ 0.57
LITAF-209ENST00000571688 LPIN2Q92539 896 aa18.59■□□□□ 0.57
LITAF-209ENST00000571688 DUOX1Q9NRD9 1551 aa18.59■□□□□ 0.57
LITAF-209ENST00000571688 MYH1P12882 1939 aa18.59■□□□□ 0.57
LITAF-209ENST00000571688 MYBP10242 640 aa18.58■□□□□ 0.57
LITAF-209ENST00000571688 ERCC3P19447 782 aa18.58■□□□□ 0.57
LITAF-209ENST00000571688 SLC8A1P32418 973 aa18.58■□□□□ 0.57
LITAF-209ENST00000571688 SCTRP47872 440 aa18.58■□□□□ 0.57
LITAF-209ENST00000571688 KRT28Q7Z3Y7 464 aa18.58■□□□□ 0.57
LITAF-209ENST00000571688 TAX1BP1Q86VP1 789 aa18.58■□□□□ 0.57
LITAF-209ENST00000571688 ANKRD13CQ8N6S4 541 aa18.58■□□□□ 0.57
LITAF-209ENST00000571688 KRT12Q99456 494 aa18.58■□□□□ 0.57
LITAF-209ENST00000571688 H0YGN5 161 aa18.58■□□□□ 0.56
LITAF-209ENST00000571688 PPP1R12AO14974 1030 aaPredicted RBP18.58■□□□□ 0.56
LITAF-209ENST00000571688 BUB1O43683 1085 aa18.58■□□□□ 0.56
LITAF-209ENST00000571688 CALM1P0DP23 149 aa18.58■□□□□ 0.56
LITAF-209ENST00000571688 CALM2P0DP24 149 aa18.58■□□□□ 0.56
LITAF-209ENST00000571688 CALM3P0DP25 149 aa18.58■□□□□ 0.56
LITAF-209ENST00000571688 CTSWP56202 376 aa18.58■□□□□ 0.56
LITAF-209ENST00000571688 PUM3Q15397 648 aaKnown RBP18.58■□□□□ 0.56
LITAF-209ENST00000571688 TRADDQ15628 312 aa18.58■□□□□ 0.56
LITAF-209ENST00000571688 SEC16BQ96JE7 1060 aa18.58■□□□□ 0.56
LITAF-209ENST00000571688 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.58■□□□□ 0.56
LITAF-209ENST00000571688 LEMD3Q9Y2U8 911 aa18.58■□□□□ 0.56
LITAF-209ENST00000571688 NFS1Q9Y697 457 aa18.58■□□□□ 0.56
LITAF-209ENST00000571688 PP2D1A8MPX8 630 aa18.57■□□□□ 0.56
LITAF-209ENST00000571688 GCOM1H8Y6P7 765 aaPredicted RBP18.57■□□□□ 0.56
LITAF-209ENST00000571688 SSBP05455 408 aaKnown RBP eCLIP18.57■□□□□ 0.56
LITAF-209ENST00000571688 MYZAPP0CAP1 466 aa18.57■□□□□ 0.56
LITAF-209ENST00000571688 CSB-PGBD3P0DP91 1061 aa18.57■□□□□ 0.56
LITAF-209ENST00000571688 RASSF7Q02833 373 aa18.57■□□□□ 0.56
LITAF-209ENST00000571688 EIF1ADQ8N9N8 165 aaKnown RBP18.57■□□□□ 0.56
LITAF-209ENST00000571688 LRRC15Q8TF66 581 aa18.57■□□□□ 0.56
LITAF-209ENST00000571688 SCLT1Q96NL6 688 aa18.57■□□□□ 0.56
LITAF-209ENST00000571688 LRRC53A6NM62 1247 aa18.57■□□□□ 0.56
LITAF-209ENST00000571688 MGRN1O60291 552 aa18.57■□□□□ 0.56
LITAF-209ENST00000571688 PAEPP09466 180 aa18.57■□□□□ 0.56
LITAF-209ENST00000571688 PAX7P23759 505 aa18.57■□□□□ 0.56
LITAF-209ENST00000571688 SRBD1Q8N5C6 995 aaKnown RBP18.57■□□□□ 0.56
LITAF-209ENST00000571688 P3H4Q92791 437 aa18.57■□□□□ 0.56
LITAF-209ENST00000571688 FAM207AQ9NSI2 230 aaPredicted RBP18.57■□□□□ 0.56
LITAF-209ENST00000571688 RTN2O75298 545 aa18.56■□□□□ 0.56
LITAF-209ENST00000571688 DDAH1O94760 285 aa18.56■□□□□ 0.56
LITAF-209ENST00000571688 SCG2P13521 617 aa18.56■□□□□ 0.56
LITAF-209ENST00000571688 IBSPP21815 317 aaPredicted RBP18.56■□□□□ 0.56
LITAF-209ENST00000571688 ARMC9Q7Z3E5 817 aa18.56■□□□□ 0.56
LITAF-209ENST00000571688 INPP4AQ96PE3 977 aaPredicted RBP18.56■□□□□ 0.56
LITAF-209ENST00000571688 CCSER1Q9C0I3 900 aa18.56■□□□□ 0.56
LITAF-209ENST00000571688 TAF1DQ9H5J8 278 aaPredicted RBP18.56■□□□□ 0.56
LITAF-209ENST00000571688 ADAMTSL3P82987 1691 aa18.56■□□□□ 0.56
LITAF-209ENST00000571688 LRP5O75197 1615 aa18.56■□□□□ 0.56
LITAF-209ENST00000571688 A0A1B0GUA9 196 aa18.56■□□□□ 0.56
LITAF-209ENST00000571688 MINDY4BA8MYZ0 360 aa18.56■□□□□ 0.56
LITAF-209ENST00000571688 SMIM22K7EJ46 135 aa18.56■□□□□ 0.56
LITAF-209ENST00000571688 RAD51CO43502 376 aa18.56■□□□□ 0.56
LITAF-209ENST00000571688 DNAJC8O75937 253 aaPredicted RBP18.56■□□□□ 0.56
LITAF-209ENST00000571688 HSD17B3P37058 310 aa18.56■□□□□ 0.56
LITAF-209ENST00000571688 PPP1R2P41236 205 aa18.56■□□□□ 0.56
LITAF-209ENST00000571688 SLC1A4P43007 532 aa18.56■□□□□ 0.56
LITAF-209ENST00000571688 CLNS1AP54105 237 aaKnown RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms