RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 SH3RF1Q7Z6J0 888 aa16.85■□□□□ 0.29
LITAF-208ENST00000571627 SGMS1Q86VZ5 419 aa16.85■□□□□ 0.29
LITAF-208ENST00000571627 NSUN6Q8TEA1 469 aaKnown RBP16.85■□□□□ 0.29
LITAF-208ENST00000571627 VTI1AQ96AJ9 217 aa16.85■□□□□ 0.29
LITAF-208ENST00000571627 RRP36Q96EU6 259 aaKnown RBP16.85■□□□□ 0.29
LITAF-208ENST00000571627 GLT1D1Q96MS3 346 aa16.85■□□□□ 0.29
LITAF-208ENST00000571627 MAF1Q9H063 256 aa16.85■□□□□ 0.29
LITAF-208ENST00000571627 PDLIM7Q9NR12 457 aa16.85■□□□□ 0.29
LITAF-208ENST00000571627 SNX14Q9Y5W7 946 aa16.85■□□□□ 0.29
LITAF-208ENST00000571627 hCG_1642624A0A1W2PR95 340 aa16.84■□□□□ 0.29
LITAF-208ENST00000571627 B4DLN1 442 aa16.84■□□□□ 0.29
LITAF-208ENST00000571627 EIF5BO60841 1220 aaKnown RBP16.84■□□□□ 0.29
LITAF-208ENST00000571627 ARIH2O95376 493 aa16.84■□□□□ 0.29
LITAF-208ENST00000571627 CALM1P0DP23 149 aa16.84■□□□□ 0.29
LITAF-208ENST00000571627 CALM2P0DP24 149 aa16.84■□□□□ 0.29
LITAF-208ENST00000571627 CALM3P0DP25 149 aa16.84■□□□□ 0.29
LITAF-208ENST00000571627 FXR1P51114 621 aaKnown RBP eCLIP16.84■□□□□ 0.29
LITAF-208ENST00000571627 MRPL12P52815 198 aaKnown RBP16.84■□□□□ 0.29
LITAF-208ENST00000571627 GHRHRQ02643 423 aa16.84■□□□□ 0.29
LITAF-208ENST00000571627 PPP2R5BQ15173 497 aa16.84■□□□□ 0.29
LITAF-208ENST00000571627 ARHGEF16Q5VV41 709 aa16.84■□□□□ 0.29
LITAF-208ENST00000571627 APOA5Q6Q788 366 aa16.84■□□□□ 0.29
LITAF-208ENST00000571627 CXCL17Q6UXB2 119 aa16.84■□□□□ 0.29
LITAF-208ENST00000571627 CCDC82Q8N4S0 544 aa16.84■□□□□ 0.29
LITAF-208ENST00000571627 FANCBQ8NB91 859 aa16.84■□□□□ 0.29
LITAF-208ENST00000571627 SCFD2Q8WU76 684 aa16.84■□□□□ 0.29
LITAF-208ENST00000571627 COPS5Q92905 334 aa16.84■□□□□ 0.29
LITAF-208ENST00000571627 KCNB2Q92953 911 aa16.84■□□□□ 0.29
LITAF-208ENST00000571627 JAKMIP1Q96N16 626 aaKnown RBP16.84■□□□□ 0.29
LITAF-208ENST00000571627 PXMP2Q9NR77 195 aa16.84■□□□□ 0.29
LITAF-208ENST00000571627 PRKAG2Q9UGJ0 569 aa16.84■□□□□ 0.29
LITAF-208ENST00000571627 BRPF3Q9ULD4 1205 aa16.84■□□□□ 0.29
LITAF-208ENST00000571627 TRIM43BA6NCK2 446 aa16.83■□□□□ 0.28
LITAF-208ENST00000571627 MYH7BA7E2Y1 1941 aa16.83■□□□□ 0.28
LITAF-208ENST00000571627 HMGB1P09429 215 aaKnown RBP16.83■□□□□ 0.28
LITAF-208ENST00000571627 GNAQP50148 359 aa16.83■□□□□ 0.28
LITAF-208ENST00000571627 LAMA3Q16787 3333 aa16.83■□□□□ 0.28
LITAF-208ENST00000571627 SEPT14Q6ZU15 432 aa16.83■□□□□ 0.28
LITAF-208ENST00000571627 TMTC3Q6ZXV5 915 aa16.83■□□□□ 0.28
LITAF-208ENST00000571627 OR6J1Q8NGC5 347 aa16.83■□□□□ 0.28
LITAF-208ENST00000571627 TRIM43Q96BQ3 446 aaPredicted RBP16.83■□□□□ 0.28
LITAF-208ENST00000571627 LZTS2Q9BRK4 669 aa16.83■□□□□ 0.28
LITAF-208ENST00000571627 UBE2OQ9C0C9 1292 aaKnown RBP16.83■□□□□ 0.28
LITAF-208ENST00000571627 SEC63Q9UGP8 760 aaKnown RBP16.83■□□□□ 0.28
LITAF-208ENST00000571627 Q9Y3F1 56 aa16.83■□□□□ 0.28
LITAF-208ENST00000571627 ELP1O95163 1332 aa16.82■□□□□ 0.28
LITAF-208ENST00000571627 KLF18A0A0U1RQI7 1052 aa16.82■□□□□ 0.28
LITAF-208ENST00000571627 GCOM1H8Y6P7 765 aaPredicted RBP16.82■□□□□ 0.28
LITAF-208ENST00000571627 CLTBP09497 229 aa16.82■□□□□ 0.28
LITAF-208ENST00000571627 POLR2MP0CAP2 368 aa16.82■□□□□ 0.28
LITAF-208ENST00000571627 TXNP10599 105 aaKnown RBP16.82■□□□□ 0.28
LITAF-208ENST00000571627 SMARCA1P28370 1054 aa16.82■□□□□ 0.28
LITAF-208ENST00000571627 BMP8BP34820 402 aa16.82■□□□□ 0.28
LITAF-208ENST00000571627 TRAF1Q13077 416 aa16.82■□□□□ 0.28
LITAF-208ENST00000571627 STXBP2Q15833 593 aa16.82■□□□□ 0.28
LITAF-208ENST00000571627 SYNE3Q6ZMZ3 975 aa16.82■□□□□ 0.28
LITAF-208ENST00000571627 FCHSD1Q86WN1 690 aa16.82■□□□□ 0.28
LITAF-208ENST00000571627 IL31RAQ8NI17 732 aa16.82■□□□□ 0.28
LITAF-208ENST00000571627 IWS1Q96ST2 819 aa16.82■□□□□ 0.28
LITAF-208ENST00000571627 LBHD1Q9BQE6 289 aaPredicted RBP16.82■□□□□ 0.28
LITAF-208ENST00000571627 A0A0U1RQG5 324 aaPredicted RBP16.81■□□□□ 0.28
LITAF-208ENST00000571627 ZBTB43O43298 467 aa16.81■□□□□ 0.28
LITAF-208ENST00000571627 NR3C2P08235 984 aa16.81■□□□□ 0.28
LITAF-208ENST00000571627 MYCLP12524 364 aaPredicted RBP16.81■□□□□ 0.28
LITAF-208ENST00000571627 PSMC6P62333 389 aa16.81■□□□□ 0.28
LITAF-208ENST00000571627 FGD1P98174 961 aa16.81■□□□□ 0.28
LITAF-208ENST00000571627 ANKRD33Q7Z3H0 272 aa16.81■□□□□ 0.28
LITAF-208ENST00000571627 ZFP91Q96JP5 570 aaPredicted RBP16.81■□□□□ 0.28
LITAF-208ENST00000571627 PDCD2LQ9BRP1 358 aa16.81■□□□□ 0.28
LITAF-208ENST00000571627 NAP1L2Q9ULW6 460 aaPredicted RBP16.81■□□□□ 0.28
LITAF-208ENST00000571627 DOCK5Q9H7D0 1870 aa16.8■□□□□ 0.28
LITAF-208ENST00000571627 GRIN2DO15399 1336 aa16.8■□□□□ 0.28
LITAF-208ENST00000571627 CNTNAP5Q8WYK1 1306 aa16.8■□□□□ 0.28
LITAF-208ENST00000571627 SZT2Q5T011 3432 aa16.8■□□□□ 0.28
LITAF-208ENST00000571627 GOLGA8AA7E2F4 631 aa16.8■□□□□ 0.28
LITAF-208ENST00000571627 GOLGA8BA8MQT2 603 aa16.8■□□□□ 0.28
LITAF-208ENST00000571627 DCDC2CA8MYV0 355 aa16.8■□□□□ 0.28
LITAF-208ENST00000571627 ARVCFO00192 962 aa16.8■□□□□ 0.28
LITAF-208ENST00000571627 ZEB2O60315 1214 aa16.8■□□□□ 0.28
LITAF-208ENST00000571627 SLC34A2O95436 690 aa16.8■□□□□ 0.28
LITAF-208ENST00000571627 MYL3P08590 195 aa16.8■□□□□ 0.28
LITAF-208ENST00000571627 ITGB8P26012 769 aa16.8■□□□□ 0.28
LITAF-208ENST00000571627 CDK7P50613 346 aa16.8■□□□□ 0.28
LITAF-208ENST00000571627 FAAP100Q0VG06 881 aa16.8■□□□□ 0.28
LITAF-208ENST00000571627 TTLL4Q14679 1199 aa16.8■□□□□ 0.28
LITAF-208ENST00000571627 PGM5Q15124 567 aa16.8■□□□□ 0.28
LITAF-208ENST00000571627 RTN1Q16799 776 aa16.8■□□□□ 0.28
LITAF-208ENST00000571627 LY6KQ17RY6 165 aa16.8■□□□□ 0.28
LITAF-208ENST00000571627 CCDC62Q6P9F0 684 aa16.8■□□□□ 0.28
LITAF-208ENST00000571627 BLOC1S2Q6QNY1 142 aa16.8■□□□□ 0.28
LITAF-208ENST00000571627 Q6ZUG5 572 aa16.8■□□□□ 0.28
LITAF-208ENST00000571627 BADQ92934 168 aa16.8■□□□□ 0.28
LITAF-208ENST00000571627 TMEM39AQ9NV64 488 aa16.8■□□□□ 0.28
LITAF-208ENST00000571627 MAP3K20Q9NYL2 800 aaKnown RBP16.8■□□□□ 0.28
LITAF-208ENST00000571627 LAMA2P24043 3122 aaKnown RBP16.79■□□□□ 0.28
LITAF-208ENST00000571627 SCN10AQ9Y5Y9 1956 aa16.79■□□□□ 0.28
LITAF-208ENST00000571627 A0A1W2PPC1 479 aa16.79■□□□□ 0.28
LITAF-208ENST00000571627 NKRFO15226 690 aaKnown RBP eCLIP16.79■□□□□ 0.28
LITAF-208ENST00000571627 CASTP20810 708 aaKnown RBP16.79■□□□□ 0.28
LITAF-208ENST00000571627 PSMA5P28066 241 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms