RNA–Protein interactions for RNA: ENST00000569899.5

GDE1-205, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 4

Gene GDE1, Length 1,618 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-205ENST00000569899 SPP2Q13103 211 aa11.49□□□□□ -0.57
GDE1-205ENST00000569899 NR5A1Q13285 461 aa11.49□□□□□ -0.57
GDE1-205ENST00000569899 SAFBQ15424 915 aaKnown RBP eCLIP11.49□□□□□ -0.57
GDE1-205ENST00000569899 CDC37Q16543 378 aaPredicted RBP11.49□□□□□ -0.57
GDE1-205ENST00000569899 SYDE2Q5VT97 1194 aa11.49□□□□□ -0.57
GDE1-205ENST00000569899 BRAPQ7Z569 592 aa11.49□□□□□ -0.57
GDE1-205ENST00000569899 MTMR8Q96EF0 704 aa11.49□□□□□ -0.57
GDE1-205ENST00000569899 WDR18Q9BV38 432 aa11.49□□□□□ -0.57
GDE1-205ENST00000569899 AS3MTQ9HBK9 375 aa11.49□□□□□ -0.57
GDE1-205ENST00000569899 BARHL2Q9NY43 387 aa11.49□□□□□ -0.57
GDE1-205ENST00000569899 GOLGA6L22H0YM25 854 aa11.48□□□□□ -0.57
GDE1-205ENST00000569899 U2AF2P26368 475 aaKnown RBP eCLIP11.48□□□□□ -0.57
GDE1-205ENST00000569899 IREB2P48200 963 aaKnown RBP11.48□□□□□ -0.57
GDE1-205ENST00000569899 STAT2P52630 851 aa11.48□□□□□ -0.57
GDE1-205ENST00000569899 NAPAP54920 295 aa11.48□□□□□ -0.57
GDE1-205ENST00000569899 NLRP5P59047 1200 aa11.48□□□□□ -0.57
GDE1-205ENST00000569899 SNAP25P60880 206 aa11.48□□□□□ -0.57
GDE1-205ENST00000569899 QRICH1Q2TAL8 776 aa11.48□□□□□ -0.57
GDE1-205ENST00000569899 LINC01559Q495D7 138 aa11.48□□□□□ -0.57
GDE1-205ENST00000569899 BTNL9Q6UXG8 535 aa11.48□□□□□ -0.57
GDE1-205ENST00000569899 LDHDQ86WU2 507 aa11.48□□□□□ -0.57
GDE1-205ENST00000569899 ZNF280CQ8ND82 737 aa11.48□□□□□ -0.57
GDE1-205ENST00000569899 CCDC148Q8NFR7 591 aa11.48□□□□□ -0.57
GDE1-205ENST00000569899 CLMNQ96JQ2 1002 aa11.48□□□□□ -0.57
GDE1-205ENST00000569899 ZNF408Q9H9D4 720 aa11.48□□□□□ -0.57
GDE1-205ENST00000569899 SH3GLB2Q9NR46 395 aa11.48□□□□□ -0.57
GDE1-205ENST00000569899 FBXO28Q9NVF7 368 aa11.48□□□□□ -0.57
GDE1-205ENST00000569899 CSADQ9Y600 493 aa11.48□□□□□ -0.57
GDE1-205ENST00000569899 ZHX2Q9Y6X8 837 aa11.48□□□□□ -0.57
GDE1-205ENST00000569899 A0A0G2JMZ2 1700 aa11.48□□□□□ -0.57
GDE1-205ENST00000569899 MYH7BA7E2Y1 1941 aa11.47□□□□□ -0.57
GDE1-205ENST00000569899 PNMA6FA0A0J9YX94 578 aa11.47□□□□□ -0.57
GDE1-205ENST00000569899 ZBTB5O15062 677 aa11.47□□□□□ -0.57
GDE1-205ENST00000569899 WDR46O15213 610 aaKnown RBP11.47□□□□□ -0.57
GDE1-205ENST00000569899 TAL1P17542 331 aaPredicted RBP11.47□□□□□ -0.57
GDE1-205ENST00000569899 VCAM1P19320 739 aa11.47□□□□□ -0.57
GDE1-205ENST00000569899 NOM1Q5C9Z4 860 aaKnown RBP11.47□□□□□ -0.57
GDE1-205ENST00000569899 NOSTRINQ8IVI9 506 aa11.47□□□□□ -0.57
GDE1-205ENST00000569899 LPAR1Q92633 364 aa11.47□□□□□ -0.57
GDE1-205ENST00000569899 TNFRSF25Q93038 417 aa11.47□□□□□ -0.57
GDE1-205ENST00000569899 COA7Q96BR5 231 aa11.47□□□□□ -0.57
GDE1-205ENST00000569899 USP28Q96RU2 1077 aa11.47□□□□□ -0.57
GDE1-205ENST00000569899 FOXP1Q9H334 677 aaPredicted RBP11.47□□□□□ -0.57
GDE1-205ENST00000569899 ELP3Q9H9T3 547 aa11.47□□□□□ -0.57
GDE1-205ENST00000569899 LMBRD1Q9NUN5 540 aa11.47□□□□□ -0.57
GDE1-205ENST00000569899 TFIP11Q9UBB9 837 aaKnown RBP11.47□□□□□ -0.57
GDE1-205ENST00000569899 PRR12Q9ULL5 1215 aa11.47□□□□□ -0.57
GDE1-205ENST00000569899 hCG_1984214I3L0E3 225 aa11.46□□□□□ -0.57
GDE1-205ENST00000569899 USP14P54578 494 aa11.46□□□□□ -0.57
GDE1-205ENST00000569899 HMGCS2P54868 508 aa11.46□□□□□ -0.57
GDE1-205ENST00000569899 BACE1P56817 501 aa11.46□□□□□ -0.57
GDE1-205ENST00000569899 CEBPZQ03701 1054 aaKnown RBP11.46□□□□□ -0.57
GDE1-205ENST00000569899 MAP3K11Q16584 847 aa11.46□□□□□ -0.57
GDE1-205ENST00000569899 EARS2Q5JPH6 523 aaKnown RBP11.46□□□□□ -0.57
GDE1-205ENST00000569899 ZNF713Q8N859 430 aaPredicted RBP11.46□□□□□ -0.57
GDE1-205ENST00000569899 TMEM87AQ8NBN3 555 aa11.46□□□□□ -0.57
GDE1-205ENST00000569899 RASGRP4Q8TDF6 673 aa11.46□□□□□ -0.57
GDE1-205ENST00000569899 BRMS1Q9HCU9 246 aa11.46□□□□□ -0.57
GDE1-205ENST00000569899 PCDHA4Q9UN74 947 aa11.46□□□□□ -0.57
GDE1-205ENST00000569899 PRPF40AO75400 957 aaKnown RBP11.46□□□□□ -0.58
GDE1-205ENST00000569899 CALML3P27482 149 aa11.46□□□□□ -0.58
GDE1-205ENST00000569899 SLC19A1P41440 591 aa11.46□□□□□ -0.58
GDE1-205ENST00000569899 FAM160B2Q86V87 743 aa11.46□□□□□ -0.58
GDE1-205ENST00000569899 ANKRD13AQ8IZ07 590 aa11.46□□□□□ -0.58
GDE1-205ENST00000569899 BLIDQ8IZY5 108 aa11.46□□□□□ -0.58
GDE1-205ENST00000569899 ZNF511Q8NB15 262 aa11.46□□□□□ -0.58
GDE1-205ENST00000569899 DAGLBQ8NCG7 672 aa11.46□□□□□ -0.58
GDE1-205ENST00000569899 CCDC12Q8WUD4 166 aaPredicted RBP11.46□□□□□ -0.58
GDE1-205ENST00000569899 KIFC2Q96AC6 838 aa11.46□□□□□ -0.58
GDE1-205ENST00000569899 TANGO6Q9C0B7 1094 aa11.46□□□□□ -0.58
GDE1-205ENST00000569899 RPAP3Q9H6T3 665 aaPredicted RBP11.46□□□□□ -0.58
GDE1-205ENST00000569899 AFG3L2Q9Y4W6 797 aa11.46□□□□□ -0.58
GDE1-205ENST00000569899 ESYT2A0FGR8 921 aa11.45□□□□□ -0.58
GDE1-205ENST00000569899 GADD45BO75293 160 aaPredicted RBP11.45□□□□□ -0.58
GDE1-205ENST00000569899 SH3BP2P78314 561 aa11.45□□□□□ -0.58
GDE1-205ENST00000569899 PDXDC2PQ6P474 469 aa11.45□□□□□ -0.58
GDE1-205ENST00000569899 ARMC9Q7Z3E5 817 aa11.45□□□□□ -0.58
GDE1-205ENST00000569899 CHURC1Q8WUH1 139 aa11.45□□□□□ -0.58
GDE1-205ENST00000569899 LEO1Q8WVC0 666 aaPredicted RBP11.45□□□□□ -0.58
GDE1-205ENST00000569899 C12orf42Q96LP6 360 aa11.45□□□□□ -0.58
GDE1-205ENST00000569899 ZNF396Q96N95 335 aaPredicted RBP11.45□□□□□ -0.58
GDE1-205ENST00000569899 ZMYND12Q9H0C1 365 aa11.45□□□□□ -0.58
GDE1-205ENST00000569899 FEM1BQ9UK73 627 aa11.45□□□□□ -0.58
GDE1-205ENST00000569899 CLIC4Q9Y696 253 aa11.45□□□□□ -0.58
GDE1-205ENST00000569899 SMCO2A6NFE2 343 aa11.44□□□□□ -0.58
GDE1-205ENST00000569899 M0R2N6 131 aa11.44□□□□□ -0.58
GDE1-205ENST00000569899 PLA2G6O60733 806 aa11.44□□□□□ -0.58
GDE1-205ENST00000569899 TOB1P50616 345 aaPredicted RBP11.44□□□□□ -0.58
GDE1-205ENST00000569899 USH1GQ495M9 461 aa11.44□□□□□ -0.58
GDE1-205ENST00000569899 CCDC174Q6PII3 467 aa11.44□□□□□ -0.58
GDE1-205ENST00000569899 PIK3AP1Q6ZUJ8 805 aa11.44□□□□□ -0.58
GDE1-205ENST00000569899 FAM177A1Q8N128 213 aaPredicted RBP11.44□□□□□ -0.58
GDE1-205ENST00000569899 SPATA32Q96LK8 384 aa11.44□□□□□ -0.58
GDE1-205ENST00000569899 SLF1Q9BQI6 1058 aa11.44□□□□□ -0.58
GDE1-205ENST00000569899 SCAND2PQ9GZW5 306 aaPredicted RBP11.44□□□□□ -0.58
GDE1-205ENST00000569899 RANBP17Q9H2T7 1088 aaKnown RBP11.44□□□□□ -0.58
GDE1-205ENST00000569899 ELP1O95163 1332 aa11.44□□□□□ -0.58
GDE1-205ENST00000569899 C19orf81C9J6K1 198 aa11.43□□□□□ -0.58
GDE1-205ENST00000569899 WNT7AO00755 349 aa11.43□□□□□ -0.58
GDE1-205ENST00000569899 FLOT1O75955 427 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms