RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 AP5M1Q9H0R1 490 aa29.19■■■□□ 2.26
FANCA-228ENST00000567943 PRKAG2Q9UGJ0 569 aa29.19■■■□□ 2.26
FANCA-228ENST00000567943 CLTBP09497 229 aa29.18■■■□□ 2.26
FANCA-228ENST00000567943 CXCL17Q6UXB2 119 aa29.18■■■□□ 2.26
FANCA-228ENST00000567943 DHX32Q7L7V1 743 aaKnown RBP29.18■■■□□ 2.26
FANCA-228ENST00000567943 TDHQ8IZJ6 230 aa29.18■■■□□ 2.26
FANCA-228ENST00000567943 KCNB2Q92953 911 aa29.18■■■□□ 2.26
FANCA-228ENST00000567943 TCEANC2Q96MN5 208 aa29.18■■■□□ 2.26
FANCA-228ENST00000567943 TOX2Q96NM4 488 aa29.18■■■□□ 2.26
FANCA-228ENST00000567943 RMDN3Q96TC7 470 aa29.18■■■□□ 2.26
FANCA-228ENST00000567943 PNMA6FA0A0J9YX94 578 aa29.17■■■□□ 2.26
FANCA-228ENST00000567943 CFBP00751 764 aa29.17■■■□□ 2.26
FANCA-228ENST00000567943 KIF5BP33176 963 aa29.17■■■□□ 2.26
FANCA-228ENST00000567943 EXOSC10Q01780 885 aaKnown RBP29.17■■■□□ 2.26
FANCA-228ENST00000567943 NSUN6Q8TEA1 469 aaKnown RBP29.17■■■□□ 2.26
FANCA-228ENST00000567943 LBHD1Q9BQE6 289 aaPredicted RBP29.17■■■□□ 2.26
FANCA-228ENST00000567943 SLC12A7Q9Y666 1083 aa29.17■■■□□ 2.26
FANCA-228ENST00000567943 GRIN2DO15399 1336 aa29.17■■■□□ 2.26
FANCA-228ENST00000567943 KIAA0355O15063 1070 aa29.16■■■□□ 2.26
FANCA-228ENST00000567943 ARIH2O95376 493 aa29.16■■■□□ 2.26
FANCA-228ENST00000567943 RXRAP19793 462 aa29.16■■■□□ 2.26
FANCA-228ENST00000567943 RAB11FIP4Q86YS3 637 aa29.16■■■□□ 2.26
FANCA-228ENST00000567943 BADQ92934 168 aa29.16■■■□□ 2.26
FANCA-228ENST00000567943 MPHOSPH6Q99547 160 aaKnown RBP29.16■■■□□ 2.26
FANCA-228ENST00000567943 SNX14Q9Y5W7 946 aa29.16■■■□□ 2.26
FANCA-228ENST00000567943 ARVCFO00192 962 aa29.15■■■□□ 2.26
FANCA-228ENST00000567943 PLEKHA8P1O95397 391 aa29.15■■■□□ 2.26
FANCA-228ENST00000567943 SLC43A3Q8NBI5 491 aa29.15■■■□□ 2.26
FANCA-228ENST00000567943 SCFD2Q8WU76 684 aa29.15■■■□□ 2.26
FANCA-228ENST00000567943 PIBF1Q8WXW3 757 aa29.15■■■□□ 2.26
FANCA-228ENST00000567943 COPS5Q92905 334 aa29.15■■■□□ 2.26
FANCA-228ENST00000567943 VTI1AQ96AJ9 217 aa29.15■■■□□ 2.26
FANCA-228ENST00000567943 LRCH3Q96II8 777 aa29.15■■■□□ 2.26
FANCA-228ENST00000567943 SPZ1Q9BXG8 430 aa29.15■■■□□ 2.26
FANCA-228ENST00000567943 PXMP2Q9NR77 195 aa29.15■■■□□ 2.26
FANCA-228ENST00000567943 A0A0U1RQG5 324 aaPredicted RBP29.14■■■□□ 2.26
FANCA-228ENST00000567943 HMGB1P09429 215 aaKnown RBP29.14■■■□□ 2.26
FANCA-228ENST00000567943 CALM1P0DP23 149 aa29.14■■■□□ 2.26
FANCA-228ENST00000567943 CALM2P0DP24 149 aa29.14■■■□□ 2.26
FANCA-228ENST00000567943 CALM3P0DP25 149 aa29.14■■■□□ 2.26
FANCA-228ENST00000567943 HOXA13P31271 388 aaPredicted RBP29.14■■■□□ 2.26
FANCA-228ENST00000567943 CCDC62Q6P9F0 684 aa29.14■■■□□ 2.26
FANCA-228ENST00000567943 SGMS1Q86VZ5 419 aa29.14■■■□□ 2.26
FANCA-228ENST00000567943 SRBD1Q8N5C6 995 aaKnown RBP29.14■■■□□ 2.26
FANCA-228ENST00000567943 JAKMIP1Q96N16 626 aaKnown RBP29.14■■■□□ 2.26
FANCA-228ENST00000567943 IWS1Q96ST2 819 aa29.14■■■□□ 2.26
FANCA-228ENST00000567943 B4DLN1 442 aa29.13■■■□□ 2.25
FANCA-228ENST00000567943 EIF2AK2P19525 551 aaKnown RBP29.13■■■□□ 2.25
FANCA-228ENST00000567943 MRPL12P52815 198 aaKnown RBP29.13■■■□□ 2.25
FANCA-228ENST00000567943 PPP2R5BQ15173 497 aa29.13■■■□□ 2.25
FANCA-228ENST00000567943 CMTR1Q8N1G2 835 aaKnown RBP29.13■■■□□ 2.25
FANCA-228ENST00000567943 TMEM39AQ9NV64 488 aa29.13■■■□□ 2.25
FANCA-228ENST00000567943 TBX21Q9UL17 535 aa29.13■■■□□ 2.25
FANCA-228ENST00000567943 DCDC2CA8MYV0 355 aa29.12■■■□□ 2.25
FANCA-228ENST00000567943 CPA1P15085 419 aa29.12■■■□□ 2.25
FANCA-228ENST00000567943 SMARCA1P28370 1054 aa29.12■■■□□ 2.25
FANCA-228ENST00000567943 GNAQP50148 359 aa29.12■■■□□ 2.25
FANCA-228ENST00000567943 LRIT3Q3SXY7 679 aa29.12■■■□□ 2.25
FANCA-228ENST00000567943 ARHGEF16Q5VV41 709 aa29.12■■■□□ 2.25
FANCA-228ENST00000567943 SYNE3Q6ZMZ3 975 aa29.12■■■□□ 2.25
FANCA-228ENST00000567943 MICU3Q86XE3 530 aa29.12■■■□□ 2.25
FANCA-228ENST00000567943 FAM126BQ8IXS8 530 aa29.12■■■□□ 2.25
FANCA-228ENST00000567943 OR6J1Q8NGC5 347 aa29.12■■■□□ 2.25
FANCA-228ENST00000567943 MAP3K20Q9NYL2 800 aaKnown RBP29.12■■■□□ 2.25
FANCA-228ENST00000567943 EPB41L2O43491 1005 aaKnown RBP29.11■■■□□ 2.25
FANCA-228ENST00000567943 CABYRO75952 493 aa29.11■■■□□ 2.25
FANCA-228ENST00000567943 TXNP10599 105 aaKnown RBP29.11■■■□□ 2.25
FANCA-228ENST00000567943 PSMC6P62333 389 aa29.11■■■□□ 2.25
FANCA-228ENST00000567943 STXBP2Q15833 593 aa29.11■■■□□ 2.25
FANCA-228ENST00000567943 SEPT14Q6ZU15 432 aa29.11■■■□□ 2.25
FANCA-228ENST00000567943 LZTS2Q9BRK4 669 aa29.11■■■□□ 2.25
FANCA-228ENST00000567943 SCN10AQ9Y5Y9 1956 aa29.11■■■□□ 2.25
FANCA-228ENST00000567943 NKRFO15226 690 aaKnown RBP eCLIP29.1■■■□□ 2.25
FANCA-228ENST00000567943 ZEB2O60315 1214 aa29.1■■■□□ 2.25
FANCA-228ENST00000567943 CD4P01730 458 aa29.1■■■□□ 2.25
FANCA-228ENST00000567943 NR3C2P08235 984 aa29.1■■■□□ 2.25
FANCA-228ENST00000567943 TRAF1Q13077 416 aa29.1■■■□□ 2.25
FANCA-228ENST00000567943 APOA5Q6Q788 366 aa29.1■■■□□ 2.25
FANCA-228ENST00000567943 SAMD3Q8N6K7 520 aa29.1■■■□□ 2.25
FANCA-228ENST00000567943 FANCBQ8NB91 859 aa29.1■■■□□ 2.25
FANCA-228ENST00000567943 IL31RAQ8NI17 732 aa29.1■■■□□ 2.25
FANCA-228ENST00000567943 PDCD2LQ9BRP1 358 aa29.1■■■□□ 2.25
FANCA-228ENST00000567943 BRPF3Q9ULD4 1205 aa29.1■■■□□ 2.25
FANCA-228ENST00000567943 MROH7Q68CQ1 1323 aa29.1■■■□□ 2.25
FANCA-228ENST00000567943 EPHB4P54760 987 aa29.09■■■□□ 2.25
FANCA-228ENST00000567943 FGD1P98174 961 aa29.09■■■□□ 2.25
FANCA-228ENST00000567943 PURAQ00577 322 aaKnown RBP29.09■■■□□ 2.25
FANCA-228ENST00000567943 ITGA7Q13683 1181 aa29.09■■■□□ 2.25
FANCA-228ENST00000567943 TTLL4Q14679 1199 aa29.09■■■□□ 2.25
FANCA-228ENST00000567943 BLOC1S2Q6QNY1 142 aa29.09■■■□□ 2.25
FANCA-228ENST00000567943 RRP36Q96EU6 259 aaKnown RBP29.09■■■□□ 2.25
FANCA-228ENST00000567943 USP26Q9BXU7 913 aa29.09■■■□□ 2.25
FANCA-228ENST00000567943 MYH7BA7E2Y1 1941 aa29.09■■■□□ 2.25
FANCA-228ENST00000567943 A6NJR5 290 aa29.08■■■□□ 2.25
FANCA-228ENST00000567943 GCOM1H8Y6P7 765 aaPredicted RBP29.08■■■□□ 2.25
FANCA-228ENST00000567943 RGS20O76081 388 aa29.08■■■□□ 2.25
FANCA-228ENST00000567943 POLR2MP0CAP2 368 aa29.08■■■□□ 2.25
FANCA-228ENST00000567943 LY6KQ17RY6 165 aa29.08■■■□□ 2.25
FANCA-228ENST00000567943 C9orf50Q5SZB4 431 aa29.08■■■□□ 2.25
FANCA-228ENST00000567943 EIF3JO75822 258 aaKnown RBP29.07■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms