RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 CRACR2BQ8N4Y2 399 aaPredicted RBP5.61□□□□□ -1.51
CDH1-211ENST00000567320 ANAPC16Q96DE5 110 aa5.61□□□□□ -1.51
CDH1-211ENST00000567320 DDX11Q96FC9 970 aa5.61□□□□□ -1.51
CDH1-211ENST00000567320 BORCS6Q96GS4 357 aa5.61□□□□□ -1.51
CDH1-211ENST00000567320 RCC1LQ96I51 464 aaKnown RBP5.61□□□□□ -1.51
CDH1-211ENST00000567320 APBA2Q99767 749 aa5.61□□□□□ -1.51
CDH1-211ENST00000567320 KRTAP4-5Q9BYR2 181 aa5.61□□□□□ -1.51
CDH1-211ENST00000567320 GPRC5CQ9NQ84 441 aa5.61□□□□□ -1.51
CDH1-211ENST00000567320 MARCH2Q9P0N8 246 aa5.61□□□□□ -1.51
CDH1-211ENST00000567320 NTMQ9P121 344 aa5.61□□□□□ -1.51
CDH1-211ENST00000567320 JAG2Q9Y219 1238 aa5.61□□□□□ -1.51
CDH1-211ENST00000567320 SH3D21A4FU49 640 aa5.6□□□□□ -1.51
CDH1-211ENST00000567320 NAT2P11245 290 aa5.6□□□□□ -1.51
CDH1-211ENST00000567320 PLS3P13797 630 aa5.6□□□□□ -1.51
CDH1-211ENST00000567320 CNR2P34972 360 aa5.6□□□□□ -1.51
CDH1-211ENST00000567320 SARSP49591 514 aaKnown RBP5.6□□□□□ -1.51
CDH1-211ENST00000567320 HTRA3P83110 453 aa5.6□□□□□ -1.51
CDH1-211ENST00000567320 CACNB2Q08289 660 aaPredicted RBP5.6□□□□□ -1.51
CDH1-211ENST00000567320 SCRN1Q12765 414 aa5.6□□□□□ -1.51
CDH1-211ENST00000567320 NOX5Q96PH1 765 aa5.6□□□□□ -1.51
CDH1-211ENST00000567320 MTA3Q9BTC8 594 aa5.6□□□□□ -1.51
CDH1-211ENST00000567320 AP5M1Q9H0R1 490 aa5.6□□□□□ -1.51
CDH1-211ENST00000567320 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.6□□□□□ -1.51
CDH1-211ENST00000567320 APEX2Q9UBZ4 518 aa5.6□□□□□ -1.51
CDH1-211ENST00000567320 PALD1Q9ULE6 856 aa5.6□□□□□ -1.51
CDH1-211ENST00000567320 CYP2C8P10632 490 aa5.59□□□□□ -1.51
CDH1-211ENST00000567320 GGNQ86UU5 652 aa5.59□□□□□ -1.51
CDH1-211ENST00000567320 METTL16Q86W50 562 aaKnown RBP5.59□□□□□ -1.51
CDH1-211ENST00000567320 BVESQ8NE79 360 aa5.59□□□□□ -1.51
CDH1-211ENST00000567320 RASGRP4Q8TDF6 673 aa5.59□□□□□ -1.51
CDH1-211ENST00000567320 SHDQ96IW2 340 aa5.59□□□□□ -1.51
CDH1-211ENST00000567320 GPR20Q99678 358 aa5.59□□□□□ -1.51
CDH1-211ENST00000567320 INPP5FQ9Y2H2 1132 aa5.59□□□□□ -1.51
CDH1-211ENST00000567320 RBM10P98175 930 aaKnown RBP5.58□□□□□ -1.52
CDH1-211ENST00000567320 ZNF827Q17R98 1081 aa5.58□□□□□ -1.52
CDH1-211ENST00000567320 ZFYVE27Q5T4F4 411 aa5.58□□□□□ -1.52
CDH1-211ENST00000567320 CD300LDQ6UXZ3 194 aa5.58□□□□□ -1.52
CDH1-211ENST00000567320 DCP2Q8IU60 420 aaKnown RBP5.58□□□□□ -1.52
CDH1-211ENST00000567320 TEX2Q8IWB9 1127 aa5.58□□□□□ -1.52
CDH1-211ENST00000567320 CPA5Q8WXQ8 436 aa5.58□□□□□ -1.52
CDH1-211ENST00000567320 EMC9Q9Y3B6 208 aa5.58□□□□□ -1.52
CDH1-211ENST00000567320 C22orf46C9J442 243 aa5.57□□□□□ -1.52
CDH1-211ENST00000567320 NOBOXO60393 691 aa5.57□□□□□ -1.52
CDH1-211ENST00000567320 INSRRP14616 1297 aa5.57□□□□□ -1.52
CDH1-211ENST00000567320 VAMP1P23763 118 aa5.57□□□□□ -1.52
CDH1-211ENST00000567320 CASP7P55210 303 aa5.57□□□□□ -1.52
CDH1-211ENST00000567320 HDLBPQ00341 1268 aaKnown RBP5.57□□□□□ -1.52
CDH1-211ENST00000567320 NFKB2Q00653 900 aa5.57□□□□□ -1.52
CDH1-211ENST00000567320 GTF2IRD2BQ6EKJ0 949 aa5.57□□□□□ -1.52
CDH1-211ENST00000567320 ETV3LQ6ZN32 361 aa5.57□□□□□ -1.52
CDH1-211ENST00000567320 GTF2IRD2Q86UP8 949 aa5.57□□□□□ -1.52
CDH1-211ENST00000567320 MRRFQ96E11 262 aaKnown RBP5.57□□□□□ -1.52
CDH1-211ENST00000567320 YIPF4Q9BSR8 244 aa5.57□□□□□ -1.52
CDH1-211ENST00000567320 CCSER2Q9H7U1 834 aa5.57□□□□□ -1.52
CDH1-211ENST00000567320 LRP2BPQ9P2M1 347 aa5.57□□□□□ -1.52
CDH1-211ENST00000567320 DUSP10Q9Y6W6 482 aa5.57□□□□□ -1.52
CDH1-211ENST00000567320 THBDP07204 575 aa5.56□□□□□ -1.52
CDH1-211ENST00000567320 GJA8P48165 433 aa5.56□□□□□ -1.52
CDH1-211ENST00000567320 DLX2Q07687 328 aaPredicted RBP5.56□□□□□ -1.52
CDH1-211ENST00000567320 ZXDCQ2QGD7 858 aaPredicted RBP5.56□□□□□ -1.52
CDH1-211ENST00000567320 MBLAC2Q68D91 279 aa5.56□□□□□ -1.52
CDH1-211ENST00000567320 STK32CQ86UX6 486 aa5.56□□□□□ -1.52
CDH1-211ENST00000567320 ZC3H18Q86VM9 953 aaKnown RBP5.56□□□□□ -1.52
CDH1-211ENST00000567320 FAM169BQ8N8A8 192 aa5.56□□□□□ -1.52
CDH1-211ENST00000567320 SEC16BQ96JE7 1060 aa5.56□□□□□ -1.52
CDH1-211ENST00000567320 LGR4Q9BXB1 951 aa5.56□□□□□ -1.52
CDH1-211ENST00000567320 LNPKQ9C0E8 428 aa5.56□□□□□ -1.52
CDH1-211ENST00000567320 ACBD3Q9H3P7 528 aa5.56□□□□□ -1.52
CDH1-211ENST00000567320 SPATA6Q9NWH7 488 aaPredicted RBP5.56□□□□□ -1.52
CDH1-211ENST00000567320 C8BP07358 591 aa5.55□□□□□ -1.52
CDH1-211ENST00000567320 RPL11P62913 178 aaKnown RBP5.55□□□□□ -1.52
CDH1-211ENST00000567320 EFEMP1Q12805 493 aa5.55□□□□□ -1.52
CDH1-211ENST00000567320 PUM1Q14671 1186 aaKnown RBP eCLIP5.55□□□□□ -1.52
CDH1-211ENST00000567320 NCAPHQ15003 741 aa5.55□□□□□ -1.52
CDH1-211ENST00000567320 SV2CQ496J9 727 aa5.55□□□□□ -1.52
CDH1-211ENST00000567320 LARP1BQ659C4 914 aaKnown RBP5.55□□□□□ -1.52
CDH1-211ENST00000567320 HHIPL2Q6UWX4 724 aa5.55□□□□□ -1.52
CDH1-211ENST00000567320 MILR1Q7Z6M3 343 aa5.55□□□□□ -1.52
CDH1-211ENST00000567320 ZNF761Q86XN6 746 aaPredicted RBP5.55□□□□□ -1.52
CDH1-211ENST00000567320 FAM26EQ8N5C1 309 aa5.55□□□□□ -1.52
CDH1-211ENST00000567320 PLEKHO2Q8TD55 490 aa5.55□□□□□ -1.52
CDH1-211ENST00000567320 ADAMTS17Q8TE56 1095 aa5.55□□□□□ -1.52
CDH1-211ENST00000567320 DPF3Q92784 378 aa5.55□□□□□ -1.52
CDH1-211ENST00000567320 COPS5Q92905 334 aa5.55□□□□□ -1.52
CDH1-211ENST00000567320 CHAMP1Q96JM3 812 aa5.55□□□□□ -1.52
CDH1-211ENST00000567320 MMP19Q99542 508 aa5.55□□□□□ -1.52
CDH1-211ENST00000567320 SYT3Q9BQG1 590 aa5.55□□□□□ -1.52
CDH1-211ENST00000567320 GORASP1Q9BQQ3 440 aa5.55□□□□□ -1.52
CDH1-211ENST00000567320 MYO1BO43795 1136 aa5.54□□□□□ -1.52
CDH1-211ENST00000567320 FPR2P25090 351 aa5.54□□□□□ -1.52
CDH1-211ENST00000567320 ECI1P42126 302 aa5.54□□□□□ -1.52
CDH1-211ENST00000567320 KCNJ6P48051 423 aa5.54□□□□□ -1.52
CDH1-211ENST00000567320 ZNF143P52747 638 aaPredicted RBP5.54□□□□□ -1.52
CDH1-211ENST00000567320 KRTAP10-2P60368 255 aa5.54□□□□□ -1.52
CDH1-211ENST00000567320 INF2Q27J81 1249 aa5.54□□□□□ -1.52
CDH1-211ENST00000567320 RGL3Q3MIN7 710 aa5.54□□□□□ -1.52
CDH1-211ENST00000567320 IQCEQ6IPM2 695 aa5.54□□□□□ -1.52
CDH1-211ENST00000567320 CEP68Q76N32 757 aa5.54□□□□□ -1.52
CDH1-211ENST00000567320 FAM124AQ86V42 546 aa5.54□□□□□ -1.52
CDH1-211ENST00000567320 TRIM59Q8IWR1 403 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms