RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, human

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HERPUD1-211	ENST00000566550	MORC2	Q9Y6X9	1032 aa	Predicted RBP	4.13	□□□□□ -1.75
HERPUD1-211	ENST00000566550	PRR36	Q9H6K5	1346 aa		4.13	□□□□□ -1.75
HERPUD1-211	ENST00000566550	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	MEGF11	A6BM72	1044 aa		4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550		C9IYK1	514 aa		4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550		F5H423	210 aa	Predicted RBP	4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550		H3BRJ5	948 aa		4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	GFRA2	O00451	464 aa		4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	NOP56	O00567	594 aa	Known RBP	4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	DDX3Y	O15523	660 aa	Known RBP	4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	XPOT	O43592	962 aa	Known RBP	4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	ZEB2	O60315	1214 aa		4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	PIP5K1C	O60331	668 aa		4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	EFCAB14	O75071	495 aa		4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	ECEL1	O95672	775 aa		4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	APP	P05067	770 aa		4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	ESRRA	P11474	423 aa	Predicted RBP	4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	BPI	P17213	487 aa		4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	POU3F2	P20265	443 aa	Predicted RBP	4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	GRK4	P32298	578 aa		4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	MAN1A1	P33908	653 aa		4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	ADCYAP1R1	P41586	468 aa		4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	HTR3A	P46098	478 aa		4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	ZNF143	P52747	638 aa	Predicted RBP	4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	ETF1	P62495	437 aa	Known RBP	4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	GABRE	P78334	506 aa		4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	RBM10	P98175	930 aa	Known RBP	4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	CYP27A1	Q02318	531 aa		4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	ADCY1	Q08828	1119 aa		4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	AP3B2	Q13367	1082 aa		4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	BIRC3	Q13489	604 aa		4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	PDE3A	Q14432	1141 aa		4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	MAPRE1	Q15691	268 aa	Known RBP	4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	ATP13A4	Q4VNC1	1196 aa		4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	SGO2	Q562F6	1265 aa		4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	TRIM61	Q5EBN2	209 aa		4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	LCE4A	Q5TA78	99 aa		4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	CDCP2	Q5VXM1	449 aa		4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	DCAF15	Q66K64	600 aa		4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	PGM2L1	Q6PCE3	622 aa		4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	SPOCD1	Q6ZMY3	1216 aa		4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	EPM2AIP1	Q7L775	607 aa	Predicted RBP	4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	SRL	Q86TD4	932 aa		4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	TMEM192	Q8IY95	271 aa		4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	CCDC144CP	Q8IYA2	1237 aa		4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	C12orf50	Q8NA57	414 aa	Predicted RBP	4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	FBXO41	Q8TF61	875 aa		4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	BTN2A2	Q8WVV5	523 aa		4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	RUNDC1	Q96C34	613 aa		4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	SCLY	Q96I15	445 aa		4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	WNK4	Q96J92	1243 aa		4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	CDC5L	Q99459	802 aa	Known RBP	4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	KRTAP4-5	Q9BYR2	181 aa		4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	VTA1	Q9NP79	307 aa		4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	SUSD2	Q9UGT4	822 aa		4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	PHTF1	Q9UMS5	762 aa		4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	SOX13	Q9UN79	622 aa		4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	GTF2A1L	Q9UNN4	478 aa		4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	DMTF1	Q9Y222	760 aa		4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	ANKRD6	Q9Y2G4	727 aa		4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	SCIN	Q9Y6U3	715 aa		4.12	□□□□□ -1.75
HERPUD1-211	ENST00000566550	TCRBV16S1A1N1	A0A5B0	115 aa		4.11	□□□□□ -1.75
HERPUD1-211	ENST00000566550	ANO9	A1A5B4	782 aa		4.11	□□□□□ -1.75
HERPUD1-211	ENST00000566550	CFAP69	A5D8W1	941 aa		4.11	□□□□□ -1.75
HERPUD1-211	ENST00000566550	TCERG1	O14776	1098 aa	Known RBP	4.11	□□□□□ -1.75
HERPUD1-211	ENST00000566550	GAS7	O60861	476 aa		4.11	□□□□□ -1.75
HERPUD1-211	ENST00000566550	ASGR2	P07307	311 aa		4.11	□□□□□ -1.75
HERPUD1-211	ENST00000566550	LDHC	P07864	332 aa		4.11	□□□□□ -1.75
HERPUD1-211	ENST00000566550	EPHA1	P21709	976 aa		4.11	□□□□□ -1.75
HERPUD1-211	ENST00000566550	CYP2C19	P33261	490 aa		4.11	□□□□□ -1.75
HERPUD1-211	ENST00000566550	RECQL	P46063	649 aa	Predicted RBP	4.11	□□□□□ -1.75
HERPUD1-211	ENST00000566550	PMS1	P54277	932 aa	Known RBP	4.11	□□□□□ -1.75
HERPUD1-211	ENST00000566550	GEMIN4	P57678	1058 aa	Known RBP	4.11	□□□□□ -1.75
HERPUD1-211	ENST00000566550	TRIM14	Q14142	442 aa		4.11	□□□□□ -1.75
HERPUD1-211	ENST00000566550	GBX1	Q14549	363 aa		4.11	□□□□□ -1.75
HERPUD1-211	ENST00000566550	SF1	Q15637	639 aa	Known RBP	4.11	□□□□□ -1.75
HERPUD1-211	ENST00000566550	CLUL1	Q15846	466 aa		4.11	□□□□□ -1.75
HERPUD1-211	ENST00000566550	LONRF1	Q17RB8	773 aa		4.11	□□□□□ -1.75
HERPUD1-211	ENST00000566550	EFCAB2	Q5VUJ9	269 aa		4.11	□□□□□ -1.75
HERPUD1-211	ENST00000566550	ZNF280D	Q6N043	979 aa		4.11	□□□□□ -1.75
HERPUD1-211	ENST00000566550	USP53	Q70EK8	1073 aa		4.11	□□□□□ -1.75
HERPUD1-211	ENST00000566550	C12orf40	Q86WS4	652 aa		4.11	□□□□□ -1.75
HERPUD1-211	ENST00000566550	STK11IP	Q8N1F8	1099 aa		4.11	□□□□□ -1.75
HERPUD1-211	ENST00000566550	CBARP	Q8N350	705 aa	Predicted RBP	4.11	□□□□□ -1.75
HERPUD1-211	ENST00000566550	CPA6	Q8N4T0	437 aa		4.11	□□□□□ -1.75
HERPUD1-211	ENST00000566550	GSTCD	Q8NEC7	633 aa		4.11	□□□□□ -1.75
HERPUD1-211	ENST00000566550	BRF1	Q92994	677 aa		4.11	□□□□□ -1.75
HERPUD1-211	ENST00000566550	AHCYL2	Q96HN2	611 aa	Known RBP	4.11	□□□□□ -1.75
HERPUD1-211	ENST00000566550	DHRS1	Q96LJ7	313 aa		4.11	□□□□□ -1.75
HERPUD1-211	ENST00000566550	TBC1D32	Q96NH3	1257 aa		4.11	□□□□□ -1.75
HERPUD1-211	ENST00000566550	DPH2	Q9BQC3	489 aa	Predicted RBP	4.11	□□□□□ -1.75
HERPUD1-211	ENST00000566550	MKRN2	Q9H000	416 aa	Known RBP	4.11	□□□□□ -1.75
HERPUD1-211	ENST00000566550	ADAM19	Q9H013	955 aa		4.11	□□□□□ -1.75
HERPUD1-211	ENST00000566550	GBP3	Q9H0R5	595 aa		4.11	□□□□□ -1.75
HERPUD1-211	ENST00000566550	MAN1C1	Q9NR34	630 aa		4.11	□□□□□ -1.75
HERPUD1-211	ENST00000566550	THG1L	Q9NWX6	298 aa	Known RBP	4.11	□□□□□ -1.75
HERPUD1-211	ENST00000566550	MKS1	Q9NXB0	559 aa		4.11	□□□□□ -1.75
HERPUD1-211	ENST00000566550	SAMD15	Q9P1V8	674 aa		4.11	□□□□□ -1.75
HERPUD1-211	ENST00000566550	NRBP1	Q9UHY1	535 aa		4.11	□□□□□ -1.75
HERPUD1-211	ENST00000566550	PNMA8B	Q9ULN7	279 aa	Predicted RBP	4.11	□□□□□ -1.75

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