RNA–Protein interactions for RNA: ENST00000566400.5

BBS4-210, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 2,055 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-210ENST00000566400 EHD4Q9H223 541 aa10.4□□□□□ -0.75
BBS4-210ENST00000566400 PRDM4Q9UKN5 801 aa10.4□□□□□ -0.75
BBS4-210ENST00000566400 RAB21Q9UL25 225 aa10.4□□□□□ -0.75
BBS4-210ENST00000566400 MYO6Q9UM54 1294 aa10.4□□□□□ -0.75
BBS4-210ENST00000566400 ATP6V0A2Q9Y487 856 aa10.4□□□□□ -0.75
BBS4-210ENST00000566400 QSER1Q2KHR3 1735 aa10.4□□□□□ -0.75
BBS4-210ENST00000566400 MYH1P12882 1939 aa10.39□□□□□ -0.75
BBS4-210ENST00000566400 TRIM49BA6NDI0 452 aa10.39□□□□□ -0.75
BBS4-210ENST00000566400 ADAMTS3O15072 1205 aa10.39□□□□□ -0.75
BBS4-210ENST00000566400 USO1O60763 962 aaKnown RBP10.39□□□□□ -0.75
BBS4-210ENST00000566400 ALDH1B1P30837 517 aa10.39□□□□□ -0.75
BBS4-210ENST00000566400 SF3B2Q13435 895 aaKnown RBP10.39□□□□□ -0.75
BBS4-210ENST00000566400 KRT27Q7Z3Y8 459 aa10.39□□□□□ -0.75
BBS4-210ENST00000566400 KIAA1328Q86T90 577 aa10.39□□□□□ -0.75
BBS4-210ENST00000566400 AMIGO3Q86WK7 504 aa10.39□□□□□ -0.75
BBS4-210ENST00000566400 ACRBPQ8NEB7 543 aa10.39□□□□□ -0.75
BBS4-210ENST00000566400 DUSP9Q99956 384 aaKnown RBP10.39□□□□□ -0.75
BBS4-210ENST00000566400 MRIQ9BWK5 157 aa10.39□□□□□ -0.75
BBS4-210ENST00000566400 NUCKS1Q9H1E3 243 aaKnown RBP10.39□□□□□ -0.75
BBS4-210ENST00000566400 BIN2Q9UBW5 565 aaPredicted RBP10.39□□□□□ -0.75
BBS4-210ENST00000566400 POLLQ9UGP5 575 aa10.39□□□□□ -0.75
BBS4-210ENST00000566400 UBR3Q6ZT12 1888 aa10.39□□□□□ -0.75
BBS4-210ENST00000566400 USP17L5A8MUK1 530 aa10.38□□□□□ -0.75
BBS4-210ENST00000566400 NPM3O75607 178 aaKnown RBP10.38□□□□□ -0.75
BBS4-210ENST00000566400 ARHGAP25P42331 645 aa10.38□□□□□ -0.75
BBS4-210ENST00000566400 TXKP42681 527 aa10.38□□□□□ -0.75
BBS4-210ENST00000566400 ZNF543Q08ER8 600 aa10.38□□□□□ -0.75
BBS4-210ENST00000566400 SPA17Q15506 151 aa10.38□□□□□ -0.75
BBS4-210ENST00000566400 MAN2A1Q16706 1144 aa10.38□□□□□ -0.75
BBS4-210ENST00000566400 ANKRD40Q6AI12 368 aa10.38□□□□□ -0.75
BBS4-210ENST00000566400 HDXQ7Z353 690 aa10.38□□□□□ -0.75
BBS4-210ENST00000566400 PCMTD1Q96MG8 357 aaPredicted RBP10.38□□□□□ -0.75
BBS4-210ENST00000566400 SLF1Q9BQI6 1058 aa10.38□□□□□ -0.75
BBS4-210ENST00000566400 TTYH3Q9C0H2 523 aa10.38□□□□□ -0.75
BBS4-210ENST00000566400 DHX36Q9H2U1 1008 aaKnown RBP10.38□□□□□ -0.75
BBS4-210ENST00000566400 VAT1LQ9HCJ6 419 aa10.38□□□□□ -0.75
BBS4-210ENST00000566400 B4DLN1 442 aa10.38□□□□□ -0.75
BBS4-210ENST00000566400 MARCH6O60337 910 aa10.38□□□□□ -0.75
BBS4-210ENST00000566400 GNA14O95837 355 aa10.38□□□□□ -0.75
BBS4-210ENST00000566400 HNRNPH3P31942 346 aaKnown RBP10.38□□□□□ -0.75
BBS4-210ENST00000566400 BAG6P46379 1132 aa10.38□□□□□ -0.75
BBS4-210ENST00000566400 PMS1P54277 932 aaKnown RBP10.38□□□□□ -0.75
BBS4-210ENST00000566400 FKBP1AP62942 108 aaKnown RBP10.38□□□□□ -0.75
BBS4-210ENST00000566400 GTF2IP78347 998 aa10.38□□□□□ -0.75
BBS4-210ENST00000566400 MAP9Q49MG5 647 aa10.38□□□□□ -0.75
BBS4-210ENST00000566400 CCDC122Q5T0U0 273 aa10.38□□□□□ -0.75
BBS4-210ENST00000566400 CCDC70Q6NSX1 233 aa10.38□□□□□ -0.75
BBS4-210ENST00000566400 MOXD1Q6UVY6 613 aa10.38□□□□□ -0.75
BBS4-210ENST00000566400 POTEDQ86YR6 584 aa10.38□□□□□ -0.75
BBS4-210ENST00000566400 KCTD17Q8N5Z5 321 aa10.38□□□□□ -0.75
BBS4-210ENST00000566400 RAD54LQ92698 747 aa10.38□□□□□ -0.75
BBS4-210ENST00000566400 LTBP1Q14766 1721 aa10.37□□□□□ -0.75
BBS4-210ENST00000566400 POLRMTO00411 1230 aaKnown RBP10.37□□□□□ -0.75
BBS4-210ENST00000566400 ZBTB5O15062 677 aa10.37□□□□□ -0.75
BBS4-210ENST00000566400 NPR1P16066 1061 aa10.37□□□□□ -0.75
BBS4-210ENST00000566400 CLK2P49760 499 aaKnown RBP10.37□□□□□ -0.75
BBS4-210ENST00000566400 KIF5AQ12840 1032 aa10.37□□□□□ -0.75
BBS4-210ENST00000566400 STK4Q13043 487 aa10.37□□□□□ -0.75
BBS4-210ENST00000566400 TRAF1Q13077 416 aa10.37□□□□□ -0.75
BBS4-210ENST00000566400 VWA3BQ502W6 1294 aa10.37□□□□□ -0.75
BBS4-210ENST00000566400 HYIQ5T013 277 aa10.37□□□□□ -0.75
BBS4-210ENST00000566400 SNX29Q8TEQ0 813 aa10.37□□□□□ -0.75
BBS4-210ENST00000566400 RUBCNQ92622 972 aa10.37□□□□□ -0.75
BBS4-210ENST00000566400 TEKT1Q969V4 418 aa10.37□□□□□ -0.75
BBS4-210ENST00000566400 PLIN2Q99541 437 aa10.37□□□□□ -0.75
BBS4-210ENST00000566400 MMTAG2Q9BU76 263 aaKnown RBP10.37□□□□□ -0.75
BBS4-210ENST00000566400 IRX2Q9BZI1 471 aaPredicted RBP10.37□□□□□ -0.75
BBS4-210ENST00000566400 LUC7LQ9NQ29 371 aaKnown RBP10.37□□□□□ -0.75
BBS4-210ENST00000566400 SAR1BQ9Y6B6 198 aa10.37□□□□□ -0.75
BBS4-210ENST00000566400 EP400Q96L91 3159 aa10.37□□□□□ -0.75
BBS4-210ENST00000566400 G3V3G9 751 aa10.37□□□□□ -0.75
BBS4-210ENST00000566400 TBC1D8O95759 1140 aa10.37□□□□□ -0.75
BBS4-210ENST00000566400 PLA2G4AP47712 749 aa10.37□□□□□ -0.75
BBS4-210ENST00000566400 USP11P51784 963 aa10.37□□□□□ -0.75
BBS4-210ENST00000566400 GRB10Q13322 594 aa10.37□□□□□ -0.75
BBS4-210ENST00000566400 AP3B2Q13367 1082 aa10.37□□□□□ -0.75
BBS4-210ENST00000566400 LONRF2Q1L5Z9 754 aa10.37□□□□□ -0.75
BBS4-210ENST00000566400 TMEM119Q4V9L6 283 aa10.37□□□□□ -0.75
BBS4-210ENST00000566400 DCAF8Q5TAQ9 597 aa10.37□□□□□ -0.75
BBS4-210ENST00000566400 PAPD7Q5XG87 772 aaKnown RBP10.37□□□□□ -0.75
BBS4-210ENST00000566400 WDR93Q6P2C0 686 aa10.37□□□□□ -0.75
BBS4-210ENST00000566400 SLFN12Q8IYM2 578 aa10.37□□□□□ -0.75
BBS4-210ENST00000566400 NLGN1Q8N2Q7 840 aa10.37□□□□□ -0.75
BBS4-210ENST00000566400 TRIM58Q8NG06 486 aa10.37□□□□□ -0.75
BBS4-210ENST00000566400 DCAF4Q8WV16 495 aa10.37□□□□□ -0.75
BBS4-210ENST00000566400 JAKMIP2Q96AA8 810 aa10.37□□□□□ -0.75
BBS4-210ENST00000566400 MTMR8Q96EF0 704 aa10.37□□□□□ -0.75
BBS4-210ENST00000566400 CCDC42Q96M95 316 aa10.37□□□□□ -0.75
BBS4-210ENST00000566400 CHP1Q99653 195 aa10.37□□□□□ -0.75
BBS4-210ENST00000566400 UBXN6Q9BZV1 441 aa10.37□□□□□ -0.75
BBS4-210ENST00000566400 UBA5Q9GZZ9 404 aa10.37□□□□□ -0.75
BBS4-210ENST00000566400 NHEJ1Q9H9Q4 299 aaPredicted RBP10.37□□□□□ -0.75
BBS4-210ENST00000566400 LRRC4BQ9NT99 713 aa10.37□□□□□ -0.75
BBS4-210ENST00000566400 USP40Q9NVE5 1235 aa10.37□□□□□ -0.75
BBS4-210ENST00000566400 DDX25Q9UHL0 483 aaKnown RBP10.37□□□□□ -0.75
BBS4-210ENST00000566400 GUCA1BQ9UMX6 200 aa10.37□□□□□ -0.75
BBS4-210ENST00000566400 PLAGL2Q9UPG8 496 aa10.37□□□□□ -0.75
BBS4-210ENST00000566400 TARSL2A2RTX5 802 aaKnown RBP10.36□□□□□ -0.75
BBS4-210ENST00000566400 PDE6BP35913 854 aa10.36□□□□□ -0.75
BBS4-210ENST00000566400 VAV2P52735 878 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms