RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 HIPK3Q9H422 1215 aa23.47■■□□□ 1.35
CLN6-207ENST00000566347 ZBTB5O15062 677 aa23.46■■□□□ 1.35
CLN6-207ENST00000566347 MYL3P08590 195 aa23.46■■□□□ 1.35
CLN6-207ENST00000566347 CSF2RAP15509 400 aa23.46■■□□□ 1.35
CLN6-207ENST00000566347 TRAF1Q13077 416 aa23.46■■□□□ 1.35
CLN6-207ENST00000566347 GRM4Q14833 912 aa23.46■■□□□ 1.35
CLN6-207ENST00000566347 WTAPQ15007 396 aa23.46■■□□□ 1.35
CLN6-207ENST00000566347 STXBP2Q15833 593 aa23.46■■□□□ 1.35
CLN6-207ENST00000566347 PSRC1Q6PGN9 363 aaPredicted RBP23.46■■□□□ 1.35
CLN6-207ENST00000566347 FAM161BQ96MY7 647 aa23.46■■□□□ 1.35
CLN6-207ENST00000566347 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.46■■□□□ 1.35
CLN6-207ENST00000566347 TRPV6Q9H1D0 765 aa23.46■■□□□ 1.35
CLN6-207ENST00000566347 COL20A1Q9P218 1284 aa23.46■■□□□ 1.35
CLN6-207ENST00000566347 TMEM265A0A087WTH1 108 aa23.45■■□□□ 1.34
CLN6-207ENST00000566347 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.45■■□□□ 1.34
CLN6-207ENST00000566347 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.45■■□□□ 1.34
CLN6-207ENST00000566347 A6NJR5 290 aa23.45■■□□□ 1.34
CLN6-207ENST00000566347 B4GALT4O60513 344 aa23.45■■□□□ 1.34
CLN6-207ENST00000566347 CYP2C18P33260 490 aa23.45■■□□□ 1.34
CLN6-207ENST00000566347 TMEM240Q5SV17 173 aa23.45■■□□□ 1.34
CLN6-207ENST00000566347 ARHGEF16Q5VV41 709 aa23.45■■□□□ 1.34
CLN6-207ENST00000566347 ALDH8A1Q9H2A2 487 aaPredicted RBP23.45■■□□□ 1.34
CLN6-207ENST00000566347 SEMA6BQ9H3T3 888 aa23.45■■□□□ 1.34
CLN6-207ENST00000566347 MAP3K20Q9NYL2 800 aaKnown RBP23.45■■□□□ 1.34
CLN6-207ENST00000566347 CFBP00751 764 aa23.44■■□□□ 1.34
CLN6-207ENST00000566347 SUPT20HL2P0C7V6 817 aa23.44■■□□□ 1.34
CLN6-207ENST00000566347 GHRHRQ02643 423 aa23.44■■□□□ 1.34
CLN6-207ENST00000566347 CCDC62Q6P9F0 684 aa23.44■■□□□ 1.34
CLN6-207ENST00000566347 C16orf59Q7L2K0 433 aa23.44■■□□□ 1.34
CLN6-207ENST00000566347 SAMD3Q8N6K7 520 aa23.44■■□□□ 1.34
CLN6-207ENST00000566347 COPS5Q92905 334 aa23.44■■□□□ 1.34
CLN6-207ENST00000566347 NOC4LQ9BVI4 516 aaKnown RBP23.44■■□□□ 1.34
CLN6-207ENST00000566347 IL23AQ9NPF7 189 aa23.44■■□□□ 1.34
CLN6-207ENST00000566347 PCDHA1Q9Y5I3 950 aa23.44■■□□□ 1.34
CLN6-207ENST00000566347 RBM8AQ9Y5S9 174 aaKnown RBP23.44■■□□□ 1.34
CLN6-207ENST00000566347 TAF6LQ9Y6J9 622 aa23.44■■□□□ 1.34
CLN6-207ENST00000566347 SCN10AQ9Y5Y9 1956 aa23.43■■□□□ 1.34
CLN6-207ENST00000566347 ARIH2O95376 493 aa23.43■■□□□ 1.34
CLN6-207ENST00000566347 HSD17B4P51659 736 aa23.43■■□□□ 1.34
CLN6-207ENST00000566347 TMEM67Q5HYA8 995 aa23.43■■□□□ 1.34
CLN6-207ENST00000566347 SEPT14Q6ZU15 432 aa23.43■■□□□ 1.34
CLN6-207ENST00000566347 STOX1Q6ZVD7 989 aa23.43■■□□□ 1.34
CLN6-207ENST00000566347 CATIPQ7Z7H3 387 aa23.43■■□□□ 1.34
CLN6-207ENST00000566347 RIOX1Q9H6W3 641 aa23.43■■□□□ 1.34
CLN6-207ENST00000566347 KIAA1217Q5T5P2 1943 aa23.43■■□□□ 1.34
CLN6-207ENST00000566347 PPP1R11O60927 126 aaPredicted RBP23.42■■□□□ 1.34
CLN6-207ENST00000566347 EIF3JO75822 258 aaKnown RBP23.42■■□□□ 1.34
CLN6-207ENST00000566347 EIF2AK2P19525 551 aaKnown RBP23.42■■□□□ 1.34
CLN6-207ENST00000566347 TROAPQ12815 778 aa23.42■■□□□ 1.34
CLN6-207ENST00000566347 ZNF365Q70YC5 407 aa23.42■■□□□ 1.34
CLN6-207ENST00000566347 MB21D2Q8IYB1 491 aaPredicted RBP23.42■■□□□ 1.34
CLN6-207ENST00000566347 PXMP2Q9NR77 195 aa23.42■■□□□ 1.34
CLN6-207ENST00000566347 OPLAHO14841 1288 aa23.41■■□□□ 1.34
CLN6-207ENST00000566347 GH1P01241 217 aa23.41■■□□□ 1.34
CLN6-207ENST00000566347 ACRP10323 421 aa23.41■■□□□ 1.34
CLN6-207ENST00000566347 RASIP1Q5U651 963 aa23.41■■□□□ 1.34
CLN6-207ENST00000566347 NFRKBQ6P4R8 1299 aa23.41■■□□□ 1.34
CLN6-207ENST00000566347 CHST3Q7LGC8 479 aa23.41■■□□□ 1.34
CLN6-207ENST00000566347 HOMER1Q86YM7 354 aa23.41■■□□□ 1.34
CLN6-207ENST00000566347 CDX2Q99626 313 aaPredicted RBP23.41■■□□□ 1.34
CLN6-207ENST00000566347 MTA3Q9BTC8 594 aa23.41■■□□□ 1.34
CLN6-207ENST00000566347 MTIF3Q9H2K0 278 aaKnown RBP23.41■■□□□ 1.34
CLN6-207ENST00000566347 TTYH1Q9H313 450 aaPredicted RBP23.41■■□□□ 1.34
CLN6-207ENST00000566347 SENP2Q9HC62 589 aa23.41■■□□□ 1.34
CLN6-207ENST00000566347 UMODL1Q5DID0 1318 aa23.4■■□□□ 1.34
CLN6-207ENST00000566347 NR3C2P08235 984 aa23.4■■□□□ 1.34
CLN6-207ENST00000566347 ANTXR2P58335 489 aa23.4■■□□□ 1.34
CLN6-207ENST00000566347 PTPN11Q06124 597 aaPredicted RBP23.4■■□□□ 1.34
CLN6-207ENST00000566347 NBPF20Q3BBV1 942 aa23.4■■□□□ 1.34
CLN6-207ENST00000566347 FAM47CQ5HY64 1035 aa23.4■■□□□ 1.34
CLN6-207ENST00000566347 IGDCC4Q8TDY8 1250 aa23.4■■□□□ 1.34
CLN6-207ENST00000566347 PIGSQ96S52 555 aa23.4■■□□□ 1.34
CLN6-207ENST00000566347 TRMT13Q9NUP7 481 aaKnown RBP23.4■■□□□ 1.34
CLN6-207ENST00000566347 BAZ2BQ9UIF8 2168 aaKnown RBP23.4■■□□□ 1.34
CLN6-207ENST00000566347 PNMA6FA0A0J9YX94 578 aa23.39■■□□□ 1.33
CLN6-207ENST00000566347 FGBP02675 491 aa23.39■■□□□ 1.33
CLN6-207ENST00000566347 DNAJB2P25686 324 aa23.39■■□□□ 1.33
CLN6-207ENST00000566347 CCL23P55773 120 aa23.39■■□□□ 1.33
CLN6-207ENST00000566347 ARHGAP1Q07960 439 aa23.39■■□□□ 1.33
CLN6-207ENST00000566347 LY6KQ17RY6 165 aa23.39■■□□□ 1.33
CLN6-207ENST00000566347 SLC35G1Q2M3R5 365 aa23.39■■□□□ 1.33
CLN6-207ENST00000566347 CASC1Q6TDU7 716 aa23.39■■□□□ 1.33
CLN6-207ENST00000566347 RPUSD2Q8IZ73 545 aaKnown RBP23.39■■□□□ 1.33
CLN6-207ENST00000566347 AFG1LQ8WV93 481 aa23.39■■□□□ 1.33
CLN6-207ENST00000566347 HERVK_113Q902F9 699 aa23.39■■□□□ 1.33
CLN6-207ENST00000566347 MAP3K14Q99558 947 aa23.39■■□□□ 1.33
CLN6-207ENST00000566347 WNT8AQ9H1J5 351 aa23.39■■□□□ 1.33
CLN6-207ENST00000566347 CYTH3O43739 400 aa23.38■■□□□ 1.33
CLN6-207ENST00000566347 MMP3P08254 477 aa23.38■■□□□ 1.33
CLN6-207ENST00000566347 PDCD2LQ9BRP1 358 aa23.38■■□□□ 1.33
CLN6-207ENST00000566347 ESYT1Q9BSJ8 1104 aa23.38■■□□□ 1.33
CLN6-207ENST00000566347 LSG1Q9H089 658 aaKnown RBP23.38■■□□□ 1.33
CLN6-207ENST00000566347 DDX41Q9UJV9 622 aaKnown RBP23.38■■□□□ 1.33
CLN6-207ENST00000566347 MRVI1Q9Y6F6 885 aa23.38■■□□□ 1.33
CLN6-207ENST00000566347 GCOM1H8Y6P7 765 aaPredicted RBP23.37■■□□□ 1.33
CLN6-207ENST00000566347 DDAH1O94760 285 aa23.37■■□□□ 1.33
CLN6-207ENST00000566347 POLR2MP0CAP2 368 aa23.37■■□□□ 1.33
CLN6-207ENST00000566347 KCNV1Q6PIU1 500 aa23.37■■□□□ 1.33
CLN6-207ENST00000566347 CENPQQ7L2Z9 268 aaPredicted RBP23.37■■□□□ 1.33
CLN6-207ENST00000566347 CTCFLQ8NI51 663 aaPredicted RBP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms