RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 DDX49Q9Y6V7 483 aaKnown RBP10.8□□□□□ -0.68
VPS9D1-205ENST00000565452 TCRBV5S4A2TA0A5A2 114 aa10.79□□□□□ -0.68
VPS9D1-205ENST00000565452 TMEM232C9JQI7 657 aa10.79□□□□□ -0.68
VPS9D1-205ENST00000565452 IPO8O15397 1037 aaKnown RBP10.79□□□□□ -0.68
VPS9D1-205ENST00000565452 BCAR3O75815 825 aa10.79□□□□□ -0.68
VPS9D1-205ENST00000565452 CKBP12277 381 aa10.79□□□□□ -0.68
VPS9D1-205ENST00000565452 BMP3P12645 472 aa10.79□□□□□ -0.68
VPS9D1-205ENST00000565452 IKQ13123 557 aaPredicted RBP10.79□□□□□ -0.68
VPS9D1-205ENST00000565452 FAM160B2Q86V87 743 aa10.79□□□□□ -0.68
VPS9D1-205ENST00000565452 LRRC47Q8N1G4 583 aaKnown RBP10.79□□□□□ -0.68
VPS9D1-205ENST00000565452 SP7Q8TDD2 431 aaPredicted RBP10.79□□□□□ -0.68
VPS9D1-205ENST00000565452 YME1L1Q96TA2 773 aa10.79□□□□□ -0.68
VPS9D1-205ENST00000565452 MPHOSPH6Q99547 160 aaKnown RBP10.79□□□□□ -0.68
VPS9D1-205ENST00000565452 ALG13Q9NP73 1137 aaKnown RBP10.79□□□□□ -0.68
VPS9D1-205ENST00000565452 SYNPO2Q9UMS6 1093 aa10.79□□□□□ -0.68
VPS9D1-205ENST00000565452 TECTAO75443 2155 aa10.79□□□□□ -0.68
VPS9D1-205ENST00000565452 PRR23AA6NEV1 266 aa10.78□□□□□ -0.68
VPS9D1-205ENST00000565452 LGR5O75473 907 aa10.78□□□□□ -0.68
VPS9D1-205ENST00000565452 RB1P06400 928 aa10.78□□□□□ -0.68
VPS9D1-205ENST00000565452 STAT2P52630 851 aa10.78□□□□□ -0.68
VPS9D1-205ENST00000565452 DLX2Q07687 328 aaPredicted RBP10.78□□□□□ -0.68
VPS9D1-205ENST00000565452 RBL2Q08999 1139 aa10.78□□□□□ -0.68
VPS9D1-205ENST00000565452 SLFN13Q68D06 897 aa10.78□□□□□ -0.68
VPS9D1-205ENST00000565452 CTR9Q6PD62 1173 aa10.78□□□□□ -0.68
VPS9D1-205ENST00000565452 NSMFQ6X4W1 530 aa10.78□□□□□ -0.68
VPS9D1-205ENST00000565452 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.78□□□□□ -0.68
VPS9D1-205ENST00000565452 SESTD1Q86VW0 696 aa10.78□□□□□ -0.68
VPS9D1-205ENST00000565452 FBXO11Q86XK2 927 aa10.78□□□□□ -0.68
VPS9D1-205ENST00000565452 MYOCDQ8IZQ8 938 aa10.78□□□□□ -0.68
VPS9D1-205ENST00000565452 ZNF444Q8N0Y2 327 aaPredicted RBP10.78□□□□□ -0.68
VPS9D1-205ENST00000565452 GMCL1P1Q8NEA9 526 aa10.78□□□□□ -0.68
VPS9D1-205ENST00000565452 STAG1Q8WVM7 1258 aa10.78□□□□□ -0.68
VPS9D1-205ENST00000565452 LMAN2LQ9H0V9 348 aa10.78□□□□□ -0.68
VPS9D1-205ENST00000565452 IGFLR1Q9H665 355 aa10.78□□□□□ -0.68
VPS9D1-205ENST00000565452 ISY1Q9ULR0 285 aaKnown RBP10.78□□□□□ -0.68
VPS9D1-205ENST00000565452 C5orf42Q9H799 3197 aa10.78□□□□□ -0.68
VPS9D1-205ENST00000565452 B4DLN1 442 aa10.77□□□□□ -0.69
VPS9D1-205ENST00000565452 LOC730098B7Z3J9 87 aa10.77□□□□□ -0.69
VPS9D1-205ENST00000565452 GALR2O43603 387 aaPredicted RBP10.77□□□□□ -0.69
VPS9D1-205ENST00000565452 MBD4O95243 580 aa10.77□□□□□ -0.69
VPS9D1-205ENST00000565452 NBL1P41271 181 aa10.77□□□□□ -0.69
VPS9D1-205ENST00000565452 MRPL12P52815 198 aaKnown RBP10.77□□□□□ -0.69
VPS9D1-205ENST00000565452 VCPP55072 806 aaKnown RBP10.77□□□□□ -0.69
VPS9D1-205ENST00000565452 HYAL1Q12794 435 aa10.77□□□□□ -0.69
VPS9D1-205ENST00000565452 ADAM15Q13444 863 aa10.77□□□□□ -0.69
VPS9D1-205ENST00000565452 PPP2R5BQ15173 497 aa10.77□□□□□ -0.69
VPS9D1-205ENST00000565452 TCTN1Q2MV58 587 aa10.77□□□□□ -0.69
VPS9D1-205ENST00000565452 GDF6Q6KF10 455 aaPredicted RBP10.77□□□□□ -0.69
VPS9D1-205ENST00000565452 SCFD2Q8WU76 684 aa10.77□□□□□ -0.69
VPS9D1-205ENST00000565452 NKD2Q969F2 451 aaPredicted RBP10.77□□□□□ -0.69
VPS9D1-205ENST00000565452 TOP1MTQ969P6 601 aa10.77□□□□□ -0.69
VPS9D1-205ENST00000565452 ZNF287Q9HBT7 754 aa10.77□□□□□ -0.69
VPS9D1-205ENST00000565452 SLC4A4Q9Y6R1 1079 aa10.77□□□□□ -0.69
VPS9D1-205ENST00000565452 EMSYQ7Z589 1322 aa10.77□□□□□ -0.69
VPS9D1-205ENST00000565452 GOLIM4O00461 696 aa10.76□□□□□ -0.69
VPS9D1-205ENST00000565452 KDM4AO75164 1064 aa10.76□□□□□ -0.69
VPS9D1-205ENST00000565452 EYA4O95677 639 aa10.76□□□□□ -0.69
VPS9D1-205ENST00000565452 TTLL1O95922 423 aa10.76□□□□□ -0.69
VPS9D1-205ENST00000565452 TXNP10599 105 aaKnown RBP10.76□□□□□ -0.69
VPS9D1-205ENST00000565452 CASTP20810 708 aaKnown RBP10.76□□□□□ -0.69
VPS9D1-205ENST00000565452 RASA1P20936 1047 aa10.76□□□□□ -0.69
VPS9D1-205ENST00000565452 PDE4BQ07343 736 aa10.76□□□□□ -0.69
VPS9D1-205ENST00000565452 PDE4DQ08499 809 aa10.76□□□□□ -0.69
VPS9D1-205ENST00000565452 PTK7Q13308 1070 aa10.76□□□□□ -0.69
VPS9D1-205ENST00000565452 MKRN4PQ13434 485 aaPredicted RBP10.76□□□□□ -0.69
VPS9D1-205ENST00000565452 BAATQ14032 418 aaPredicted RBP10.76□□□□□ -0.69
VPS9D1-205ENST00000565452 CBX2Q14781 532 aaPredicted RBP10.76□□□□□ -0.69
VPS9D1-205ENST00000565452 MUM1L1Q5H9M0 696 aa10.76□□□□□ -0.69
VPS9D1-205ENST00000565452 AACSQ86V21 672 aa10.76□□□□□ -0.69
VPS9D1-205ENST00000565452 ADSSL1Q8N142 457 aa10.76□□□□□ -0.69
VPS9D1-205ENST00000565452 C7orf31Q8N865 590 aa10.76□□□□□ -0.69
VPS9D1-205ENST00000565452 PPP2R3CQ969Q6 453 aa10.76□□□□□ -0.69
VPS9D1-205ENST00000565452 CTAGE1Q96RT6 745 aa10.76□□□□□ -0.69
VPS9D1-205ENST00000565452 MTMR4Q9NYA4 1195 aa10.76□□□□□ -0.69
VPS9D1-205ENST00000565452 CACNA1GO43497 2377 aa10.75□□□□□ -0.69
VPS9D1-205ENST00000565452 COL11A1P12107 1806 aaPredicted RBP10.75□□□□□ -0.69
VPS9D1-205ENST00000565452 PLA2G6O60733 806 aa10.75□□□□□ -0.69
VPS9D1-205ENST00000565452 KRT37O76014 449 aa10.75□□□□□ -0.69
VPS9D1-205ENST00000565452 UPP2O95045 317 aa10.75□□□□□ -0.69
VPS9D1-205ENST00000565452 NDUFV1P49821 464 aa10.75□□□□□ -0.69
VPS9D1-205ENST00000565452 ALDH5A1P51649 535 aaPredicted RBP10.75□□□□□ -0.69
VPS9D1-205ENST00000565452 ZNF618Q5T7W0 954 aa10.75□□□□□ -0.69
VPS9D1-205ENST00000565452 MCTP2Q6DN12 878 aa10.75□□□□□ -0.69
VPS9D1-205ENST00000565452 ERC1Q8IUD2 1116 aa10.75□□□□□ -0.69
VPS9D1-205ENST00000565452 FIBCD1Q8N539 461 aa10.75□□□□□ -0.69
VPS9D1-205ENST00000565452 DBF4BQ8NFT6 615 aa10.75□□□□□ -0.69
VPS9D1-205ENST00000565452 DHX38Q92620 1227 aaKnown RBP10.75□□□□□ -0.69
VPS9D1-205ENST00000565452 ASIC4Q96FT7 647 aa10.75□□□□□ -0.69
VPS9D1-205ENST00000565452 RIPOR3Q96MK2 946 aa10.75□□□□□ -0.69
VPS9D1-205ENST00000565452 PURBQ96QR8 312 aaKnown RBP10.75□□□□□ -0.69
VPS9D1-205ENST00000565452 DNAJC2Q99543 621 aaKnown RBP10.75□□□□□ -0.69
VPS9D1-205ENST00000565452 C11orf84Q9BUA3 381 aaPredicted RBP10.75□□□□□ -0.69
VPS9D1-205ENST00000565452 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.75□□□□□ -0.69
VPS9D1-205ENST00000565452 ARPP21Q9UBL0 812 aaPredicted RBP10.75□□□□□ -0.69
VPS9D1-205ENST00000565452 RWDD3Q9Y3V2 267 aa10.75□□□□□ -0.69
VPS9D1-205ENST00000565452 SCN5AQ14524 2016 aa10.75□□□□□ -0.69
VPS9D1-205ENST00000565452 FAM186AA6NE01 2351 aa10.75□□□□□ -0.69
VPS9D1-205ENST00000565452 TET1Q8NFU7 2136 aa10.75□□□□□ -0.69
VPS9D1-205ENST00000565452 IGKV6D-41A0A0C4DH26 115 aa10.74□□□□□ -0.69
VPS9D1-205ENST00000565452 RGS20O76081 388 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms