RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 DUSP28Q4G0W2 176 aa15.81■□□□□ 0.12
VPS9D1-204ENST00000565023 C1orf53Q5VUE5 145 aa15.81■□□□□ 0.12
VPS9D1-204ENST00000565023 TCEANC2Q96MN5 208 aa15.81■□□□□ 0.12
VPS9D1-204ENST00000565023 RMDN3Q96TC7 470 aa15.81■□□□□ 0.12
VPS9D1-204ENST00000565023 MYH7BA7E2Y1 1941 aa15.8■□□□□ 0.12
VPS9D1-204ENST00000565023 ELP1O95163 1332 aa15.8■□□□□ 0.12
VPS9D1-204ENST00000565023 ZEB2O60315 1214 aa15.8■□□□□ 0.12
VPS9D1-204ENST00000565023 TXNP10599 105 aaKnown RBP15.8■□□□□ 0.12
VPS9D1-204ENST00000565023 MYCLP12524 364 aaPredicted RBP15.8■□□□□ 0.12
VPS9D1-204ENST00000565023 EDNRBP24530 442 aa15.8■□□□□ 0.12
VPS9D1-204ENST00000565023 ITGB8P26012 769 aa15.8■□□□□ 0.12
VPS9D1-204ENST00000565023 FAAP100Q0VG06 881 aa15.8■□□□□ 0.12
VPS9D1-204ENST00000565023 RNF20Q5VTR2 975 aa15.8■□□□□ 0.12
VPS9D1-204ENST00000565023 CMTR1Q8N1G2 835 aaKnown RBP15.8■□□□□ 0.12
VPS9D1-204ENST00000565023 RGS22Q8NE09 1264 aa15.8■□□□□ 0.12
VPS9D1-204ENST00000565023 PPP1R13LQ8WUF5 828 aa15.8■□□□□ 0.12
VPS9D1-204ENST00000565023 MTMR8Q96EF0 704 aa15.8■□□□□ 0.12
VPS9D1-204ENST00000565023 ZFP91Q96JP5 570 aaPredicted RBP15.8■□□□□ 0.12
VPS9D1-204ENST00000565023 TMEM87BQ96K49 555 aa15.8■□□□□ 0.12
VPS9D1-204ENST00000565023 RIOX1Q9H6W3 641 aa15.8■□□□□ 0.12
VPS9D1-204ENST00000565023 LOC102724159A0A0B4J2E5 919 aa15.79■□□□□ 0.12
VPS9D1-204ENST00000565023 ARVCFO00192 962 aa15.79■□□□□ 0.12
VPS9D1-204ENST00000565023 OPLAHO14841 1288 aa15.79■□□□□ 0.12
VPS9D1-204ENST00000565023 DDAH1O94760 285 aa15.79■□□□□ 0.12
VPS9D1-204ENST00000565023 ARIH2O95376 493 aa15.79■□□□□ 0.12
VPS9D1-204ENST00000565023 PLEKHA8P1O95397 391 aa15.79■□□□□ 0.12
VPS9D1-204ENST00000565023 KIF5BP33176 963 aa15.79■□□□□ 0.12
VPS9D1-204ENST00000565023 CHMP4BP1P59074 171 aa15.79■□□□□ 0.12
VPS9D1-204ENST00000565023 PWP2Q15269 919 aaKnown RBP15.79■□□□□ 0.12
VPS9D1-204ENST00000565023 FCHSD1Q86WN1 690 aa15.79■□□□□ 0.12
VPS9D1-204ENST00000565023 CCDC82Q8N4S0 544 aa15.79■□□□□ 0.12
VPS9D1-204ENST00000565023 NSUN6Q8TEA1 469 aaKnown RBP15.79■□□□□ 0.12
VPS9D1-204ENST00000565023 SCFD2Q8WU76 684 aa15.79■□□□□ 0.12
VPS9D1-204ENST00000565023 NEK1Q96PY6 1258 aa15.79■□□□□ 0.12
VPS9D1-204ENST00000565023 PPP1R12CQ9BZL4 782 aa15.79■□□□□ 0.12
VPS9D1-204ENST00000565023 PNMA6FA0A0J9YX94 578 aa15.78■□□□□ 0.12
VPS9D1-204ENST00000565023 RBM47A0AV96 593 aaKnown RBP15.78■□□□□ 0.12
VPS9D1-204ENST00000565023 TLR3O15455 904 aaKnown RBP15.78■□□□□ 0.12
VPS9D1-204ENST00000565023 SORBS3O60504 671 aa15.78■□□□□ 0.12
VPS9D1-204ENST00000565023 ITGA7Q13683 1181 aa15.78■□□□□ 0.12
VPS9D1-204ENST00000565023 TTLL4Q14679 1199 aa15.78■□□□□ 0.12
VPS9D1-204ENST00000565023 STXBP2Q15833 593 aa15.78■□□□□ 0.12
VPS9D1-204ENST00000565023 ADCK5Q3MIX3 580 aa15.78■□□□□ 0.12
VPS9D1-204ENST00000565023 MICU3Q86XE3 530 aa15.78■□□□□ 0.12
VPS9D1-204ENST00000565023 RASEFQ8IZ41 740 aa15.78■□□□□ 0.12
VPS9D1-204ENST00000565023 PXMP2Q9NR77 195 aa15.78■□□□□ 0.12
VPS9D1-204ENST00000565023 NAP1L2Q9ULW6 460 aaPredicted RBP15.78■□□□□ 0.12
VPS9D1-204ENST00000565023 SLC12A7Q9Y666 1083 aa15.78■□□□□ 0.12
VPS9D1-204ENST00000565023 MROH7Q68CQ1 1323 aa15.77■□□□□ 0.12
VPS9D1-204ENST00000565023 hCG_1642624A0A1W2PR95 340 aa15.77■□□□□ 0.12
VPS9D1-204ENST00000565023 GCOM1H8Y6P7 765 aaPredicted RBP15.77■□□□□ 0.12
VPS9D1-204ENST00000565023 KIAA0355O15063 1070 aa15.77■□□□□ 0.12
VPS9D1-204ENST00000565023 POLR2MP0CAP2 368 aa15.77■□□□□ 0.12
VPS9D1-204ENST00000565023 CDK7P50613 346 aa15.77■□□□□ 0.12
VPS9D1-204ENST00000565023 NKX3-2P78367 333 aa15.77■□□□□ 0.12
VPS9D1-204ENST00000565023 SHHQ15465 462 aa15.77■□□□□ 0.12
VPS9D1-204ENST00000565023 LY6KQ17RY6 165 aa15.77■□□□□ 0.12
VPS9D1-204ENST00000565023 C9orf50Q5SZB4 431 aa15.77■□□□□ 0.12
VPS9D1-204ENST00000565023 ANKRD33Q7Z3H0 272 aa15.77■□□□□ 0.12
VPS9D1-204ENST00000565023 TMTC2Q8N394 836 aa15.77■□□□□ 0.12
VPS9D1-204ENST00000565023 RRP36Q96EU6 259 aaKnown RBP15.77■□□□□ 0.12
VPS9D1-204ENST00000565023 TOX2Q96NM4 488 aa15.77■□□□□ 0.12
VPS9D1-204ENST00000565023 SEC63Q9UGP8 760 aaKnown RBP15.77■□□□□ 0.12
VPS9D1-204ENST00000565023 Q9Y3F1 56 aa15.77■□□□□ 0.12
VPS9D1-204ENST00000565023 SPTBN5Q9NRC6 3674 aaKnown RBP15.76■□□□□ 0.11
VPS9D1-204ENST00000565023 DNAH12Q6ZR08 3092 aa15.76■□□□□ 0.11
VPS9D1-204ENST00000565023 CABYRO75952 493 aa15.76■□□□□ 0.11
VPS9D1-204ENST00000565023 NR3C2P08235 984 aa15.76■□□□□ 0.11
VPS9D1-204ENST00000565023 CPT1AP50416 773 aa15.76■□□□□ 0.11
VPS9D1-204ENST00000565023 HSD17B4P51659 736 aa15.76■□□□□ 0.11
VPS9D1-204ENST00000565023 FAM47CQ5HY64 1035 aa15.76■□□□□ 0.11
VPS9D1-204ENST00000565023 SYNE3Q6ZMZ3 975 aa15.76■□□□□ 0.11
VPS9D1-204ENST00000565023 FAM126BQ8IXS8 530 aa15.76■□□□□ 0.11
VPS9D1-204ENST00000565023 SRBD1Q8N5C6 995 aaKnown RBP15.76■□□□□ 0.11
VPS9D1-204ENST00000565023 POLR3EQ9NVU0 708 aa15.76■□□□□ 0.11
VPS9D1-204ENST00000565023 GRIN2DO15399 1336 aa15.75■□□□□ 0.11
VPS9D1-204ENST00000565023 NKRFO15226 690 aaKnown RBP eCLIP15.75■□□□□ 0.11
VPS9D1-204ENST00000565023 CPA1P15085 419 aa15.75■□□□□ 0.11
VPS9D1-204ENST00000565023 LIFRP42702 1097 aa15.75■□□□□ 0.11
VPS9D1-204ENST00000565023 GNAQP50148 359 aa15.75■□□□□ 0.11
VPS9D1-204ENST00000565023 EPHB4P54760 987 aa15.75■□□□□ 0.11
VPS9D1-204ENST00000565023 FPGSQ05932 587 aa15.75■□□□□ 0.11
VPS9D1-204ENST00000565023 TRAF1Q13077 416 aa15.75■□□□□ 0.11
VPS9D1-204ENST00000565023 BRDTQ58F21 947 aaPredicted RBP15.75■□□□□ 0.11
VPS9D1-204ENST00000565023 IL31RAQ8NI17 732 aa15.75■□□□□ 0.11
VPS9D1-204ENST00000565023 IWS1Q96ST2 819 aa15.75■□□□□ 0.11
VPS9D1-204ENST00000565023 MTA3Q9BTC8 594 aa15.75■□□□□ 0.11
VPS9D1-204ENST00000565023 SPZ1Q9BXG8 430 aa15.75■□□□□ 0.11
VPS9D1-204ENST00000565023 TRPV6Q9H1D0 765 aa15.75■□□□□ 0.11
VPS9D1-204ENST00000565023 TBX21Q9UL17 535 aa15.75■□□□□ 0.11
VPS9D1-204ENST00000565023 MRVI1Q9Y6F6 885 aa15.75■□□□□ 0.11
VPS9D1-204ENST00000565023 DOCK5Q9H7D0 1870 aa15.74■□□□□ 0.11
VPS9D1-204ENST00000565023 EPB41L2O43491 1005 aaKnown RBP15.74■□□□□ 0.11
VPS9D1-204ENST00000565023 REC8O95072 547 aa15.74■□□□□ 0.11
VPS9D1-204ENST00000565023 GH1P01241 217 aa15.74■□□□□ 0.11
VPS9D1-204ENST00000565023 CALM1P0DP23 149 aa15.74■□□□□ 0.11
VPS9D1-204ENST00000565023 CALM2P0DP24 149 aa15.74■□□□□ 0.11
VPS9D1-204ENST00000565023 CALM3P0DP25 149 aa15.74■□□□□ 0.11
VPS9D1-204ENST00000565023 FGD1P98174 961 aa15.74■□□□□ 0.11
VPS9D1-204ENST00000565023 PURAQ00577 322 aaKnown RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 434.4 ms