RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 BARHL2Q9NY43 387 aa8.43□□□□□ -1.06
MAP1LC3B-205ENST00000564638 MTMR4Q9NYA4 1195 aa8.43□□□□□ -1.06
MAP1LC3B-205ENST00000564638 NYAP2Q9P242 653 aa8.43□□□□□ -1.06
MAP1LC3B-205ENST00000564638 CPA4Q9UI42 421 aa8.43□□□□□ -1.06
MAP1LC3B-205ENST00000564638 TUBE1Q9UJT0 475 aa8.43□□□□□ -1.06
MAP1LC3B-205ENST00000564638 TMX2Q9Y320 296 aa8.43□□□□□ -1.06
MAP1LC3B-205ENST00000564638 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.43□□□□□ -1.062e-8■■■□□ 16.1
MAP1LC3B-205ENST00000564638 USP17L15C9J2P7 530 aa8.42□□□□□ -1.06
MAP1LC3B-205ENST00000564638 USP17L13C9JLJ4 530 aa8.42□□□□□ -1.06
MAP1LC3B-205ENST00000564638 USP17L11C9JVI0 530 aa8.42□□□□□ -1.06
MAP1LC3B-205ENST00000564638 USP17L18D6R9N7 530 aa8.42□□□□□ -1.06
MAP1LC3B-205ENST00000564638 USP17L22D6RA61 530 aa8.42□□□□□ -1.06
MAP1LC3B-205ENST00000564638 USP17L17D6RBQ6 530 aa8.42□□□□□ -1.06
MAP1LC3B-205ENST00000564638 USP17L19D6RCP7 530 aa8.42□□□□□ -1.06
MAP1LC3B-205ENST00000564638 USP17L20D6RJB6 530 aa8.42□□□□□ -1.06
MAP1LC3B-205ENST00000564638 STXBP3O00186 592 aa8.42□□□□□ -1.06
MAP1LC3B-205ENST00000564638 BIN1O00499 593 aa8.42□□□□□ -1.06
MAP1LC3B-205ENST00000564638 AP5Z1O43299 807 aa8.42□□□□□ -1.06
MAP1LC3B-205ENST00000564638 ZNF500O60304 480 aaPredicted RBP8.42□□□□□ -1.06
MAP1LC3B-205ENST00000564638 TLR2O60603 784 aa8.42□□□□□ -1.06
MAP1LC3B-205ENST00000564638 FKTNO75072 461 aa8.42□□□□□ -1.06
MAP1LC3B-205ENST00000564638 GOLGA8HP0CJ92 632 aa8.42□□□□□ -1.06
MAP1LC3B-205ENST00000564638 USP17L24Q0WX57 530 aa8.42□□□□□ -1.06
MAP1LC3B-205ENST00000564638 POSTNQ15063 836 aa8.42□□□□□ -1.06
MAP1LC3B-205ENST00000564638 ZNF174Q15697 407 aa8.42□□□□□ -1.06
MAP1LC3B-205ENST00000564638 DPCR1Q3MIW9 517 aa8.42□□□□□ -1.06
MAP1LC3B-205ENST00000564638 EARS2Q5JPH6 523 aaKnown RBP8.42□□□□□ -1.06
MAP1LC3B-205ENST00000564638 KIAA1755Q5JYT7 1200 aa8.42□□□□□ -1.06
MAP1LC3B-205ENST00000564638 FAM83BQ5T0W9 1011 aa8.42□□□□□ -1.06
MAP1LC3B-205ENST00000564638 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.42□□□□□ -1.06
MAP1LC3B-205ENST00000564638 KRT25Q7Z3Z0 450 aa8.42□□□□□ -1.06
MAP1LC3B-205ENST00000564638 PLA2G4DQ86XP0 818 aa8.42□□□□□ -1.06
MAP1LC3B-205ENST00000564638 DHX40Q8IX18 779 aaKnown RBP8.42□□□□□ -1.06
MAP1LC3B-205ENST00000564638 CD99L2Q8TCZ2 262 aa8.42□□□□□ -1.06
MAP1LC3B-205ENST00000564638 ZNF296Q8WUU4 475 aaPredicted RBP8.42□□□□□ -1.06
MAP1LC3B-205ENST00000564638 ERCC4Q92889 916 aaPredicted RBP8.42□□□□□ -1.06
MAP1LC3B-205ENST00000564638 MRFAP1L1Q96HT8 127 aa8.42□□□□□ -1.06
MAP1LC3B-205ENST00000564638 NUP88Q99567 741 aaPredicted RBP8.42□□□□□ -1.06
MAP1LC3B-205ENST00000564638 P2RX7Q99572 595 aaKnown RBP8.42□□□□□ -1.06
MAP1LC3B-205ENST00000564638 PAGR1Q9BTK6 254 aa8.42□□□□□ -1.06
MAP1LC3B-205ENST00000564638 CSRNP2Q9H175 543 aa8.42□□□□□ -1.06
MAP1LC3B-205ENST00000564638 C6orf50Q9HD87 102 aa8.42□□□□□ -1.06
MAP1LC3B-205ENST00000564638 DACH1Q9UI36 760 aa8.42□□□□□ -1.06
MAP1LC3B-205ENST00000564638 SLC45A1Q9Y2W3 748 aa8.42□□□□□ -1.06
MAP1LC3B-205ENST00000564638 LAMA2P24043 3122 aaKnown RBP8.42□□□□□ -1.06
MAP1LC3B-205ENST00000564638 ZSWIM8A7E2V4 1837 aa8.41□□□□□ -1.06
MAP1LC3B-205ENST00000564638 A0A087WWV3 80 aa8.41□□□□□ -1.06
MAP1LC3B-205ENST00000564638 ESYT2A0FGR8 921 aa8.41□□□□□ -1.06
MAP1LC3B-205ENST00000564638 POTEFA5A3E0 1075 aa8.41□□□□□ -1.06
MAP1LC3B-205ENST00000564638 F5H6K3 240 aa8.41□□□□□ -1.06
MAP1LC3B-205ENST00000564638 IKBKBO14920 756 aa8.41□□□□□ -1.06
MAP1LC3B-205ENST00000564638 WDR46O15213 610 aaKnown RBP8.41□□□□□ -1.06
MAP1LC3B-205ENST00000564638 POLR2DO15514 142 aaKnown RBP8.41□□□□□ -1.06
MAP1LC3B-205ENST00000564638 CYTH3O43739 400 aa8.41□□□□□ -1.06
MAP1LC3B-205ENST00000564638 FLOT1O75955 427 aa8.41□□□□□ -1.06
MAP1LC3B-205ENST00000564638 SMC2O95347 1197 aa8.41□□□□□ -1.06
MAP1LC3B-205ENST00000564638 NDUFB10O96000 172 aa8.41□□□□□ -1.06
MAP1LC3B-205ENST00000564638 PDHBP11177 359 aa8.41□□□□□ -1.06
MAP1LC3B-205ENST00000564638 GNA11P29992 359 aa8.41□□□□□ -1.06
MAP1LC3B-205ENST00000564638 HOXA7P31268 230 aaPredicted RBP8.41□□□□□ -1.06
MAP1LC3B-205ENST00000564638 TXLNAP40222 546 aa8.41□□□□□ -1.06
MAP1LC3B-205ENST00000564638 HERVK_113P62684 666 aa8.41□□□□□ -1.06
MAP1LC3B-205ENST00000564638 SP3Q02447 781 aa8.41□□□□□ -1.06
MAP1LC3B-205ENST00000564638 GRIN1Q05586 938 aa8.41□□□□□ -1.06
MAP1LC3B-205ENST00000564638 KLRC3Q07444 240 aa8.41□□□□□ -1.06
MAP1LC3B-205ENST00000564638 IKQ13123 557 aaPredicted RBP8.41□□□□□ -1.06
MAP1LC3B-205ENST00000564638 PTGDRQ13258 359 aa8.41□□□□□ -1.06
MAP1LC3B-205ENST00000564638 PNOCQ13519 176 aa8.41□□□□□ -1.06
MAP1LC3B-205ENST00000564638 CCDC96Q2M329 555 aa8.41□□□□□ -1.06
MAP1LC3B-205ENST00000564638 SLC35G1Q2M3R5 365 aa8.41□□□□□ -1.06
MAP1LC3B-205ENST00000564638 LONRF3Q496Y0 759 aa8.41□□□□□ -1.06
MAP1LC3B-205ENST00000564638 SPECC1Q5M775 1068 aa8.41□□□□□ -1.06
MAP1LC3B-205ENST00000564638 ARL6IP4Q66PJ3 421 aaKnown RBP8.41□□□□□ -1.06
MAP1LC3B-205ENST00000564638 SLFN13Q68D06 897 aa8.41□□□□□ -1.06
MAP1LC3B-205ENST00000564638 PPP1R18Q6NYC8 613 aa8.41□□□□□ -1.06
MAP1LC3B-205ENST00000564638 CATSPERGQ6ZRH7 1159 aa8.41□□□□□ -1.06
MAP1LC3B-205ENST00000564638 ANKRD13CQ8N6S4 541 aa8.41□□□□□ -1.06
MAP1LC3B-205ENST00000564638 TRIML1Q8N9V2 468 aa8.41□□□□□ -1.06
MAP1LC3B-205ENST00000564638 SPC24Q8NBT2 197 aa8.41□□□□□ -1.06
MAP1LC3B-205ENST00000564638 LPAR1Q92633 364 aa8.41□□□□□ -1.06
MAP1LC3B-205ENST00000564638 SMARCE1Q969G3 411 aa8.41□□□□□ -1.06
MAP1LC3B-205ENST00000564638 CFHR5Q9BXR6 569 aa8.41□□□□□ -1.06
MAP1LC3B-205ENST00000564638 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.41□□□□□ -1.06
MAP1LC3B-205ENST00000564638 SERTAD1Q9UHV2 236 aa8.41□□□□□ -1.06
MAP1LC3B-205ENST00000564638 PRUNE2Q8WUY3 3088 aa8.41□□□□□ -1.06
MAP1LC3B-205ENST00000564638 DOCK3Q8IZD9 2030 aa8.41□□□□□ -1.06
MAP1LC3B-205ENST00000564638 MGAMO43451 1857 aa8.4□□□□□ -1.06
MAP1LC3B-205ENST00000564638 PARP14Q460N5 1801 aa8.4□□□□□ -1.06
MAP1LC3B-205ENST00000564638 FRMPD2Q68DX3 1309 aaPredicted RBP8.4□□□□□ -1.06
MAP1LC3B-205ENST00000564638 ADGRA2Q96PE1 1338 aa8.4□□□□□ -1.06
MAP1LC3B-205ENST00000564638 VWA3AA6NCI4 1184 aa8.4□□□□□ -1.06
MAP1LC3B-205ENST00000564638 LAD1O00515 517 aa8.4□□□□□ -1.06
MAP1LC3B-205ENST00000564638 ACTN4O43707 911 aaKnown RBP8.4□□□□□ -1.06
MAP1LC3B-205ENST00000564638 PEX10O60683 326 aa8.4□□□□□ -1.06
MAP1LC3B-205ENST00000564638 SNHG28P0DPA3 235 aa8.4□□□□□ -1.06
MAP1LC3B-205ENST00000564638 MCM7P33993 719 aa8.4□□□□□ -1.06
MAP1LC3B-205ENST00000564638 ORC2Q13416 577 aaPredicted RBP8.4□□□□□ -1.06
MAP1LC3B-205ENST00000564638 KIF22Q14807 665 aa8.4□□□□□ -1.06
MAP1LC3B-205ENST00000564638 NONOQ15233 471 aaKnown RBP eCLIP8.4□□□□□ -1.06
MAP1LC3B-205ENST00000564638 NOM1Q5C9Z4 860 aaKnown RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms