RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 ZNHIT6Q9NWK9 470 aaKnown RBP22.31■■□□□ 1.16
MSLN-205ENST00000563941 SWAP70Q9UH65 585 aa22.31■■□□□ 1.16
MSLN-205ENST00000563941 MYO6Q9UM54 1294 aa22.31■■□□□ 1.16
MSLN-205ENST00000563941 PNMA6FA0A0J9YX94 578 aa22.31■■□□□ 1.16
MSLN-205ENST00000563941 CTAGE15A4D2H0 777 aa22.31■■□□□ 1.16
MSLN-205ENST00000563941 CTAGE8P0CG41 777 aa22.31■■□□□ 1.16
MSLN-205ENST00000563941 CENPPQ6IPU0 288 aa22.31■■□□□ 1.16
MSLN-205ENST00000563941 CTAGE6Q86UF2 777 aa22.31■■□□□ 1.16
MSLN-205ENST00000563941 CTAGE4Q8IX94 777 aa22.31■■□□□ 1.16
MSLN-205ENST00000563941 ERGIC2Q96RQ1 377 aa22.31■■□□□ 1.16
MSLN-205ENST00000563941 FUT8Q9BYC5 575 aa22.31■■□□□ 1.16
MSLN-205ENST00000563941 UBXN6Q9BZV1 441 aa22.31■■□□□ 1.16
MSLN-205ENST00000563941 QTRT2Q9H974 415 aaKnown RBP22.31■■□□□ 1.16
MSLN-205ENST00000563941 RIC8AQ9NPQ8 531 aa22.31■■□□□ 1.16
MSLN-205ENST00000563941 PVALEFA0A1B0GWK0 134 aa22.3■■□□□ 1.16
MSLN-205ENST00000563941 KRT83P78385 493 aa22.3■■□□□ 1.16
MSLN-205ENST00000563941 PDIA5Q14554 519 aa22.3■■□□□ 1.16
MSLN-205ENST00000563941 UBE2SQ16763 222 aa22.3■■□□□ 1.16
MSLN-205ENST00000563941 LONRF2Q1L5Z9 754 aa22.3■■□□□ 1.16
MSLN-205ENST00000563941 SLC27A3Q5K4L6 730 aa22.3■■□□□ 1.16
MSLN-205ENST00000563941 FKBP15Q5T1M5 1219 aa22.3■■□□□ 1.16
MSLN-205ENST00000563941 DYMQ7RTS9 669 aa22.3■■□□□ 1.16
MSLN-205ENST00000563941 SNX29Q8TEQ0 813 aa22.3■■□□□ 1.16
MSLN-205ENST00000563941 USP40Q9NVE5 1235 aa22.3■■□□□ 1.16
MSLN-205ENST00000563941 ATP6V0A2Q9Y487 856 aa22.3■■□□□ 1.16
MSLN-205ENST00000563941 C10orf71Q711Q0 1435 aa22.3■■□□□ 1.16
MSLN-205ENST00000563941 ADAMTSL1Q8N6G6 1762 aa22.3■■□□□ 1.16
MSLN-205ENST00000563941 PSMD14O00487 310 aa22.3■■□□□ 1.16
MSLN-205ENST00000563941 NKRFO15226 690 aaKnown RBP eCLIP22.3■■□□□ 1.16
MSLN-205ENST00000563941 PPP1R11O60927 126 aaPredicted RBP22.3■■□□□ 1.16
MSLN-205ENST00000563941 CYLC1P35663 651 aaPredicted RBP22.3■■□□□ 1.16
MSLN-205ENST00000563941 FAM193AP78312 1265 aa22.3■■□□□ 1.16
MSLN-205ENST00000563941 CCDC122Q5T0U0 273 aa22.3■■□□□ 1.16
MSLN-205ENST00000563941 RAD54LQ92698 747 aa22.3■■□□□ 1.16
MSLN-205ENST00000563941 RAB21Q9UL25 225 aa22.3■■□□□ 1.16
MSLN-205ENST00000563941 TFR2Q9UP52 801 aa22.3■■□□□ 1.16
MSLN-205ENST00000563941 MYO3BQ8WXR4 1341 aa22.29■■□□□ 1.16
MSLN-205ENST00000563941 MYH4Q9Y623 1939 aa22.29■■□□□ 1.16
MSLN-205ENST00000563941 SHMT1P34896 483 aa22.29■■□□□ 1.16
MSLN-205ENST00000563941 FIGNQ5HY92 759 aa22.29■■□□□ 1.16
MSLN-205ENST00000563941 KRT79Q5XKE5 535 aa22.29■■□□□ 1.16
MSLN-205ENST00000563941 TTBK2Q6IQ55 1244 aa22.29■■□□□ 1.16
MSLN-205ENST00000563941 ZNF662Q6ZS27 426 aa22.29■■□□□ 1.16
MSLN-205ENST00000563941 KIAA1328Q86T90 577 aa22.29■■□□□ 1.16
MSLN-205ENST00000563941 PNKPQ96T60 521 aa22.29■■□□□ 1.16
MSLN-205ENST00000563941 NUDT12Q9BQG2 462 aa22.29■■□□□ 1.16
MSLN-205ENST00000563941 MXD3Q9BW11 206 aa22.29■■□□□ 1.16
MSLN-205ENST00000563941 NHEJ1Q9H9Q4 299 aaPredicted RBP22.29■■□□□ 1.16
MSLN-205ENST00000563941 ANKRD31Q8N7Z5 1873 aa22.29■■□□□ 1.16
MSLN-205ENST00000563941 ZC3H12CQ9C0D7 883 aaKnown RBP22.28■■□□□ 1.16
MSLN-205ENST00000563941 A0A1W2PQJ5 194 aa22.28■■□□□ 1.16
MSLN-205ENST00000563941 CLK2P49760 499 aaKnown RBP22.28■■□□□ 1.16
MSLN-205ENST00000563941 SCNN1DP51172 638 aa22.28■■□□□ 1.16
MSLN-205ENST00000563941 TMEM119Q4V9L6 283 aa22.28■■□□□ 1.16
MSLN-205ENST00000563941 PPP4R3AQ6IN85 833 aa22.28■■□□□ 1.16
MSLN-205ENST00000563941 CCDC170Q8IYT3 715 aa22.28■■□□□ 1.16
MSLN-205ENST00000563941 HNRNPLLQ8WVV9 542 aaKnown RBP22.28■■□□□ 1.16
MSLN-205ENST00000563941 JAKMIP2Q96AA8 810 aa22.28■■□□□ 1.16
MSLN-205ENST00000563941 MYH7BA7E2Y1 1941 aa22.27■■□□□ 1.16
MSLN-205ENST00000563941 GREB1LQ9C091 1923 aaPredicted RBP22.27■■□□□ 1.16
MSLN-205ENST00000563941 EIF3CLB5ME19 914 aaKnown RBP22.27■■□□□ 1.16
MSLN-205ENST00000563941 CCDC96Q2M329 555 aa22.27■■□□□ 1.16
MSLN-205ENST00000563941 NCAPH2Q6IBW4 605 aa22.27■■□□□ 1.16
MSLN-205ENST00000563941 TRAPPC11Q7Z392 1133 aa22.27■■□□□ 1.16
MSLN-205ENST00000563941 GUF1Q8N442 669 aaKnown RBP22.27■■□□□ 1.16
MSLN-205ENST00000563941 CUL5Q93034 780 aa22.27■■□□□ 1.16
MSLN-205ENST00000563941 EIF3CQ99613 913 aaKnown RBP22.27■■□□□ 1.16
MSLN-205ENST00000563941 KRT86O43790 486 aa22.27■■□□□ 1.15
MSLN-205ENST00000563941 RHOXF2BP0C7M4 288 aa22.27■■□□□ 1.15
MSLN-205ENST00000563941 SLC16A2P36021 539 aa22.27■■□□□ 1.15
MSLN-205ENST00000563941 SMC1AQ14683 1233 aaKnown RBP22.27■■□□□ 1.15
MSLN-205ENST00000563941 GPATCH4Q5T3I0 446 aaKnown RBP22.27■■□□□ 1.15
MSLN-205ENST00000563941 KCNK18Q7Z418 384 aa22.27■■□□□ 1.15
MSLN-205ENST00000563941 RHOXF2Q9BQY4 288 aa22.27■■□□□ 1.15
MSLN-205ENST00000563941 DDX25Q9UHL0 483 aaKnown RBP22.27■■□□□ 1.15
MSLN-205ENST00000563941 MPHOSPH10O00566 681 aaKnown RBP22.26■■□□□ 1.15
MSLN-205ENST00000563941 POLR3GO15318 223 aaPredicted RBP22.26■■□□□ 1.15
MSLN-205ENST00000563941 IPO7O95373 1038 aaKnown RBP22.26■■□□□ 1.15
MSLN-205ENST00000563941 IDEP14735 1019 aa22.26■■□□□ 1.15
MSLN-205ENST00000563941 OAS2P29728 719 aaKnown RBP22.26■■□□□ 1.15
MSLN-205ENST00000563941 CDK17Q00537 523 aa22.26■■□□□ 1.15
MSLN-205ENST00000563941 ATP2B2Q01814 1243 aa22.26■■□□□ 1.15
MSLN-205ENST00000563941 VWA3BQ502W6 1294 aa22.26■■□□□ 1.15
MSLN-205ENST00000563941 CDC42EP5Q6NZY7 148 aa22.26■■□□□ 1.15
MSLN-205ENST00000563941 EHBP1Q8NDI1 1231 aa22.26■■□□□ 1.15
MSLN-205ENST00000563941 DDX12PQ92771 950 aa22.26■■□□□ 1.15
MSLN-205ENST00000563941 IQCDQ96DY2 449 aa22.26■■□□□ 1.15
MSLN-205ENST00000563941 LRRC27Q9C0I9 530 aa22.26■■□□□ 1.15
MSLN-205ENST00000563941 USP17L10C9JJH3 530 aa22.25■■□□□ 1.15
MSLN-205ENST00000563941 ENC1O14682 589 aa22.25■■□□□ 1.15
MSLN-205ENST00000563941 HLA-DOAP06340 250 aa22.25■■□□□ 1.15
MSLN-205ENST00000563941 DOK7Q18PE1 504 aa22.25■■□□□ 1.15
MSLN-205ENST00000563941 RCCD1A6NED2 376 aa22.25■■□□□ 1.15
MSLN-205ENST00000563941 ZBTB5O15062 677 aa22.25■■□□□ 1.15
MSLN-205ENST00000563941 ATP1A1P05023 1023 aaKnown RBP22.25■■□□□ 1.15
MSLN-205ENST00000563941 MRPL12P52815 198 aaKnown RBP22.25■■□□□ 1.15
MSLN-205ENST00000563941 BEND6Q5SZJ8 279 aaPredicted RBP22.25■■□□□ 1.15
MSLN-205ENST00000563941 KCTD1Q719H9 257 aa22.25■■□□□ 1.15
MSLN-205ENST00000563941 NOA1Q8NC60 698 aaKnown RBP22.25■■□□□ 1.15
MSLN-205ENST00000563941 HAS1Q92839 578 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms