RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 MYRIPQ8NFW9 859 aa21.46■■□□□ 1.03
SMPD3-203ENST00000563226 CRYGNQ8WXF5 182 aa21.46■■□□□ 1.03
SMPD3-203ENST00000563226 GLIS2Q9BZE0 524 aaPredicted RBP21.46■■□□□ 1.03
SMPD3-203ENST00000563226 RAB34Q9BZG1 259 aa21.46■■□□□ 1.03
SMPD3-203ENST00000563226 ATAD5Q96QE3 1844 aa21.45■■□□□ 1.02
SMPD3-203ENST00000563226 TBC1D12O60347 775 aa21.45■■□□□ 1.02
SMPD3-203ENST00000563226 PBX1P40424 430 aa21.45■■□□□ 1.02
SMPD3-203ENST00000563226 ADKP55263 362 aaKnown RBP21.45■■□□□ 1.02
SMPD3-203ENST00000563226 PDE4DQ08499 809 aa21.45■■□□□ 1.02
SMPD3-203ENST00000563226 HPS3Q969F9 1004 aa21.45■■□□□ 1.02
SMPD3-203ENST00000563226 CDK5RAP3Q96JB5 506 aa21.45■■□□□ 1.02
SMPD3-203ENST00000563226 LIMA1Q9UHB6 759 aaKnown RBP21.45■■□□□ 1.02
SMPD3-203ENST00000563226 MYMKA6NI61 221 aa21.44■■□□□ 1.02
SMPD3-203ENST00000563226 FCER1AP12319 257 aa21.44■■□□□ 1.02
SMPD3-203ENST00000563226 POLD1P28340 1107 aa21.44■■□□□ 1.02
SMPD3-203ENST00000563226 STAT2P52630 851 aa21.44■■□□□ 1.02
SMPD3-203ENST00000563226 STK4Q13043 487 aa21.44■■□□□ 1.02
SMPD3-203ENST00000563226 AP3B2Q13367 1082 aa21.44■■□□□ 1.02
SMPD3-203ENST00000563226 TMEM119Q4V9L6 283 aa21.44■■□□□ 1.02
SMPD3-203ENST00000563226 KRT79Q5XKE5 535 aa21.44■■□□□ 1.02
SMPD3-203ENST00000563226 LARP4BQ92615 738 aaKnown RBP21.44■■□□□ 1.02
SMPD3-203ENST00000563226 MTFR1LQ9H019 292 aa21.44■■□□□ 1.02
SMPD3-203ENST00000563226 STK17AQ9UEE5 414 aa21.44■■□□□ 1.02
SMPD3-203ENST00000563226 MARCH6O60337 910 aa21.44■■□□□ 1.02
SMPD3-203ENST00000563226 HOXA13P31271 388 aaPredicted RBP21.44■■□□□ 1.02
SMPD3-203ENST00000563226 MMP14P50281 582 aa21.44■■□□□ 1.02
SMPD3-203ENST00000563226 USP11P51784 963 aa21.44■■□□□ 1.02
SMPD3-203ENST00000563226 ARHGAP4P98171 946 aa21.44■■□□□ 1.02
SMPD3-203ENST00000563226 SV2BQ7L1I2 683 aa21.44■■□□□ 1.02
SMPD3-203ENST00000563226 IRF2BP1Q8IU81 584 aa21.44■■□□□ 1.02
SMPD3-203ENST00000563226 JDP2Q8WYK2 163 aa21.44■■□□□ 1.02
SMPD3-203ENST00000563226 RAD54LQ92698 747 aa21.44■■□□□ 1.02
SMPD3-203ENST00000563226 MBOAT7Q96N66 472 aa21.44■■□□□ 1.02
SMPD3-203ENST00000563226 CTAGE1Q96RT6 745 aa21.44■■□□□ 1.02
SMPD3-203ENST00000563226 GOPCQ9HD26 462 aa21.44■■□□□ 1.02
SMPD3-203ENST00000563226 KCNMB3Q9NPA1 279 aa21.44■■□□□ 1.02
SMPD3-203ENST00000563226 EXOC1Q9NV70 894 aa21.44■■□□□ 1.02
SMPD3-203ENST00000563226 UTRNP46939 3433 aa21.44■■□□□ 1.02
SMPD3-203ENST00000563226 CYP3A7-CYP3A51PA0A087WV96 503 aa21.43■■□□□ 1.02
SMPD3-203ENST00000563226 KCNJ18B7U540 433 aa21.43■■□□□ 1.02
SMPD3-203ENST00000563226 CYP3A7P24462 503 aa21.43■■□□□ 1.02
SMPD3-203ENST00000563226 CAP2P40123 477 aa21.43■■□□□ 1.02
SMPD3-203ENST00000563226 KCNJ6P48051 423 aa21.43■■□□□ 1.02
SMPD3-203ENST00000563226 KCNJ12Q14500 433 aa21.43■■□□□ 1.02
SMPD3-203ENST00000563226 TCP11X2Q5H9J9 407 aa21.43■■□□□ 1.02
SMPD3-203ENST00000563226 CCDC112Q8NEF3 446 aa21.43■■□□□ 1.02
SMPD3-203ENST00000563226 PPP1R13BQ96KQ4 1090 aa21.43■■□□□ 1.02
SMPD3-203ENST00000563226 TAB2Q9NYJ8 693 aa21.43■■□□□ 1.02
SMPD3-203ENST00000563226 PCDHA12Q9UN75 941 aa21.43■■□□□ 1.02
SMPD3-203ENST00000563226 AMPD3Q01432 767 aa21.43■■□□□ 1.02
SMPD3-203ENST00000563226 NAP1L4Q99733 375 aaKnown RBP21.43■■□□□ 1.02
SMPD3-203ENST00000563226 VPS16Q9H269 839 aa21.43■■□□□ 1.02
SMPD3-203ENST00000563226 RIOK3O14730 519 aaKnown RBP21.42■■□□□ 1.02
SMPD3-203ENST00000563226 NRDCO43847 1150 aa21.42■■□□□ 1.02
SMPD3-203ENST00000563226 COPB1P53618 953 aaKnown RBP21.42■■□□□ 1.02
SMPD3-203ENST00000563226 CEP135Q66GS9 1140 aa21.42■■□□□ 1.02
SMPD3-203ENST00000563226 TTI2Q6NXR4 508 aa21.42■■□□□ 1.02
SMPD3-203ENST00000563226 DYMQ7RTS9 669 aa21.42■■□□□ 1.02
SMPD3-203ENST00000563226 CREBRFQ8IUR6 639 aa21.42■■□□□ 1.02
SMPD3-203ENST00000563226 KIAA0895Q8NCT3 520 aa21.42■■□□□ 1.02
SMPD3-203ENST00000563226 VCPKMTQ9H867 229 aa21.42■■□□□ 1.02
SMPD3-203ENST00000563226 LRRC10BA6NIK2 292 aa21.41■■□□□ 1.02
SMPD3-203ENST00000563226 PSMA7O14818 248 aa21.41■■□□□ 1.02
SMPD3-203ENST00000563226 SEMA3FQ13275 785 aa21.41■■□□□ 1.02
SMPD3-203ENST00000563226 STIM1Q13586 685 aa21.41■■□□□ 1.02
SMPD3-203ENST00000563226 RASA3Q14644 834 aa21.41■■□□□ 1.02
SMPD3-203ENST00000563226 PTPN14Q15678 1187 aa21.41■■□□□ 1.02
SMPD3-203ENST00000563226 FILIP1LQ4L180 1135 aa21.41■■□□□ 1.02
SMPD3-203ENST00000563226 PSDA5PKW4 1024 aaPredicted RBP21.41■■□□□ 1.02
SMPD3-203ENST00000563226 H7C1D1 291 aa21.41■■□□□ 1.02
SMPD3-203ENST00000563226 STAT3P40763 770 aa21.41■■□□□ 1.02
SMPD3-203ENST00000563226 RASSF7Q02833 373 aa21.41■■□□□ 1.02
SMPD3-203ENST00000563226 CCDC174Q6PII3 467 aa21.41■■□□□ 1.02
SMPD3-203ENST00000563226 KIFC2Q96AC6 838 aa21.41■■□□□ 1.02
SMPD3-203ENST00000563226 LENG9Q96B70 501 aa21.41■■□□□ 1.02
SMPD3-203ENST00000563226 BCS1LQ9Y276 419 aa21.41■■□□□ 1.02
SMPD3-203ENST00000563226 ASTN2O75129 1339 aaPredicted RBP21.4■■□□□ 1.02
SMPD3-203ENST00000563226 SPDYE3A6NKU9 549 aa21.4■■□□□ 1.02
SMPD3-203ENST00000563226 FAM86B1E9PN63 330 aa21.4■■□□□ 1.02
SMPD3-203ENST00000563226 FAM86B2P0C5J1 330 aa21.4■■□□□ 1.02
SMPD3-203ENST00000563226 SREBF1P36956 1147 aa21.4■■□□□ 1.02
SMPD3-203ENST00000563226 PRELPP51888 382 aa21.4■■□□□ 1.02
SMPD3-203ENST00000563226 MAP3K10Q02779 954 aa21.4■■□□□ 1.02
SMPD3-203ENST00000563226 SPAG1Q07617 926 aa21.4■■□□□ 1.02
SMPD3-203ENST00000563226 PRR16Q569H4 304 aa21.4■■□□□ 1.02
SMPD3-203ENST00000563226 MOXD1Q6UVY6 613 aa21.4■■□□□ 1.02
SMPD3-203ENST00000563226 ETNPPLQ8TBG4 499 aa21.4■■□□□ 1.02
SMPD3-203ENST00000563226 TBC1D5Q92609 795 aa21.4■■□□□ 1.02
SMPD3-203ENST00000563226 CCDC47Q96A33 483 aaKnown RBP21.4■■□□□ 1.02
SMPD3-203ENST00000563226 TRIM47Q96LD4 638 aa21.4■■□□□ 1.02
SMPD3-203ENST00000563226 DUSP9Q99956 384 aaKnown RBP21.4■■□□□ 1.02
SMPD3-203ENST00000563226 FBXO28Q9NVF7 368 aa21.4■■□□□ 1.02
SMPD3-203ENST00000563226 N4BP3O15049 544 aa21.4■■□□□ 1.02
SMPD3-203ENST00000563226 ZNF280AP59817 542 aaPredicted RBP21.4■■□□□ 1.02
SMPD3-203ENST00000563226 RBL2Q08999 1139 aa21.4■■□□□ 1.02
SMPD3-203ENST00000563226 SAMD1Q6SPF0 538 aaPredicted RBP21.4■■□□□ 1.02
SMPD3-203ENST00000563226 TSC1Q92574 1164 aa21.4■■□□□ 1.02
SMPD3-203ENST00000563226 ZNF592Q92610 1267 aa21.4■■□□□ 1.02
SMPD3-203ENST00000563226 DHTKD1Q96HY7 919 aaPredicted RBP21.4■■□□□ 1.02
SMPD3-203ENST00000563226 BAG1Q99933 345 aaPredicted RBP21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms