RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 DNAJC7Q99615 494 aa4.88□□□□□ -1.63
SHCBP1-202ENST00000563219 SPATA9Q9BWV2 254 aa4.88□□□□□ -1.63
SHCBP1-202ENST00000563219 XYLT2Q9H1B5 865 aa4.88□□□□□ -1.63
SHCBP1-202ENST00000563219 IRS2Q9Y4H2 1338 aa4.88□□□□□ -1.63
SHCBP1-202ENST00000563219 AURKAO14965 403 aa4.87□□□□□ -1.63
SHCBP1-202ENST00000563219 FGF10O15520 208 aaPredicted RBP4.87□□□□□ -1.63
SHCBP1-202ENST00000563219 ADCY3O60266 1144 aa4.87□□□□□ -1.63
SHCBP1-202ENST00000563219 DIAPH1O60610 1272 aaKnown RBP4.87□□□□□ -1.63
SHCBP1-202ENST00000563219 SASH1O94885 1247 aa4.87□□□□□ -1.63
SHCBP1-202ENST00000563219 BUD31P41223 144 aaPredicted RBP4.87□□□□□ -1.63
SHCBP1-202ENST00000563219 AMPD2Q01433 879 aa4.87□□□□□ -1.63
SHCBP1-202ENST00000563219 LONRF2Q1L5Z9 754 aa4.87□□□□□ -1.63
SHCBP1-202ENST00000563219 ZC3H14Q6PJT7 736 aaKnown RBP4.87□□□□□ -1.63
SHCBP1-202ENST00000563219 NLGN2Q8NFZ4 835 aa4.87□□□□□ -1.63
SHCBP1-202ENST00000563219 ZDHHC15Q96MV8 337 aa4.87□□□□□ -1.63
SHCBP1-202ENST00000563219 PWWP2AQ96N64 755 aa4.87□□□□□ -1.63
SHCBP1-202ENST00000563219 LGR4Q9BXB1 951 aa4.87□□□□□ -1.63
SHCBP1-202ENST00000563219 KRTAP4-11Q9BYQ6 195 aa4.87□□□□□ -1.63
SHCBP1-202ENST00000563219 NKX2-4Q9H2Z4 354 aa4.87□□□□□ -1.63
SHCBP1-202ENST00000563219 PDLIM7Q9NR12 457 aa4.87□□□□□ -1.63
SHCBP1-202ENST00000563219 LRP2BPQ9P2M1 347 aa4.87□□□□□ -1.63
SHCBP1-202ENST00000563219 TBX1O43435 398 aa4.86□□□□□ -1.63
SHCBP1-202ENST00000563219 FOXD2O60548 495 aaPredicted RBP4.86□□□□□ -1.63
SHCBP1-202ENST00000563219 BUB1BO60566 1050 aaPredicted RBP4.86□□□□□ -1.63
SHCBP1-202ENST00000563219 VAMP4O75379 141 aa4.86□□□□□ -1.63
SHCBP1-202ENST00000563219 KCNH1O95259 989 aa4.86□□□□□ -1.63
SHCBP1-202ENST00000563219 TBC1D8O95759 1140 aa4.86□□□□□ -1.63
SHCBP1-202ENST00000563219 CYBBP04839 570 aa4.86□□□□□ -1.63
SHCBP1-202ENST00000563219 SCG5P05408 212 aa4.86□□□□□ -1.63
SHCBP1-202ENST00000563219 NCKAP1LP55160 1127 aa4.86□□□□□ -1.63
SHCBP1-202ENST00000563219 PPP2R2AP63151 447 aa4.86□□□□□ -1.63
SHCBP1-202ENST00000563219 SSRP1Q08945 709 aaKnown RBP4.86□□□□□ -1.63
SHCBP1-202ENST00000563219 HSP90AA2PQ14568 343 aaPredicted RBP4.86□□□□□ -1.63
SHCBP1-202ENST00000563219 VMACQ2NL98 169 aa4.86□□□□□ -1.63
SHCBP1-202ENST00000563219 PLEKHN1Q494U1 663 aaPredicted RBP4.86□□□□□ -1.63
SHCBP1-202ENST00000563219 LCE5AQ5TCM9 118 aa4.86□□□□□ -1.63
SHCBP1-202ENST00000563219 GTF2IRD2BQ6EKJ0 949 aa4.86□□□□□ -1.63
SHCBP1-202ENST00000563219 PAQR3Q6TCH7 311 aa4.86□□□□□ -1.63
SHCBP1-202ENST00000563219 GTF2IRD2Q86UP8 949 aa4.86□□□□□ -1.63
SHCBP1-202ENST00000563219 LILRB2Q8N423 598 aa4.86□□□□□ -1.63
SHCBP1-202ENST00000563219 THAP3Q8WTV1 239 aaPredicted RBP4.86□□□□□ -1.63
SHCBP1-202ENST00000563219 BTN2A2Q8WVV5 523 aa4.86□□□□□ -1.63
SHCBP1-202ENST00000563219 PPP1R14AQ96A00 147 aa4.86□□□□□ -1.63
SHCBP1-202ENST00000563219 PTCHD1Q96NR3 888 aa4.86□□□□□ -1.63
SHCBP1-202ENST00000563219 MCMBPQ9BTE3 642 aa4.86□□□□□ -1.63
SHCBP1-202ENST00000563219 CYP26B1Q9NR63 512 aa4.86□□□□□ -1.63
SHCBP1-202ENST00000563219 ARHGEF4Q9NR80 690 aa4.86□□□□□ -1.63
SHCBP1-202ENST00000563219 PFDN2Q9UHV9 154 aa4.86□□□□□ -1.63
SHCBP1-202ENST00000563219 KDM2BQ8NHM5 1336 aa4.86□□□□□ -1.63
SHCBP1-202ENST00000563219 A0A1W2PQJ5 194 aa4.85□□□□□ -1.63
SHCBP1-202ENST00000563219 OTOL1A6NHN0 477 aaPredicted RBP4.85□□□□□ -1.63
SHCBP1-202ENST00000563219 SRGAP3O43295 1099 aa4.85□□□□□ -1.63
SHCBP1-202ENST00000563219 SMARCA5O60264 1052 aaPredicted RBP4.85□□□□□ -1.63
SHCBP1-202ENST00000563219 CD3EP07766 207 aa4.85□□□□□ -1.63
SHCBP1-202ENST00000563219 DBHP09172 617 aa4.85□□□□□ -1.63
SHCBP1-202ENST00000563219 FGFR1P11362 822 aa4.85□□□□□ -1.63
SHCBP1-202ENST00000563219 IFNGR1P15260 489 aa4.85□□□□□ -1.63
SHCBP1-202ENST00000563219 IGFBP6P24592 240 aaPredicted RBP4.85□□□□□ -1.63
SHCBP1-202ENST00000563219 HOXC12P31275 282 aa4.85□□□□□ -1.63
SHCBP1-202ENST00000563219 CORO7P57737 925 aa4.85□□□□□ -1.63
SHCBP1-202ENST00000563219 CAP1Q01518 475 aa4.85□□□□□ -1.63
SHCBP1-202ENST00000563219 CYP4F3Q08477 520 aa4.85□□□□□ -1.63
SHCBP1-202ENST00000563219 NFIXQ14938 502 aa4.85□□□□□ -1.63
SHCBP1-202ENST00000563219 C2orf27AQ580R0 203 aa4.85□□□□□ -1.63
SHCBP1-202ENST00000563219 ZC3H12BQ5HYM0 836 aaKnown RBP4.85□□□□□ -1.63
SHCBP1-202ENST00000563219 RCSD1Q6JBY9 416 aa4.85□□□□□ -1.63
SHCBP1-202ENST00000563219 FAM177A1Q8N128 213 aaPredicted RBP4.85□□□□□ -1.63
SHCBP1-202ENST00000563219 LINC01356Q8N9X3 169 aa4.85□□□□□ -1.63
SHCBP1-202ENST00000563219 ZBTB38Q8NAP3 1195 aaPredicted RBP4.85□□□□□ -1.63
SHCBP1-202ENST00000563219 COPS5Q92905 334 aa4.85□□□□□ -1.63
SHCBP1-202ENST00000563219 CCDC140Q96MF4 163 aa4.85□□□□□ -1.63
SHCBP1-202ENST00000563219 AARSD1Q9BTE6 412 aaKnown RBP4.85□□□□□ -1.63
SHCBP1-202ENST00000563219 RTEL1Q9NZ71 1219 aa4.85□□□□□ -1.63
SHCBP1-202ENST00000563219 BACE2Q9Y5Z0 518 aa4.85□□□□□ -1.63
SHCBP1-202ENST00000563219 ADAMTS20P59510 1910 aa4.85□□□□□ -1.63
SHCBP1-202ENST00000563219 TRAV20A0A0B4J274 112 aa4.84□□□□□ -1.63
SHCBP1-202ENST00000563219 PFKLP17858 780 aa4.84□□□□□ -1.63
SHCBP1-202ENST00000563219 L1CAMP32004 1257 aa4.84□□□□□ -1.63
SHCBP1-202ENST00000563219 GFRA1P56159 465 aa4.84□□□□□ -1.63
SHCBP1-202ENST00000563219 ZNF200P98182 395 aaPredicted RBP4.84□□□□□ -1.63
SHCBP1-202ENST00000563219 TARBP2Q15633 366 aaKnown RBP4.84□□□□□ -1.63
SHCBP1-202ENST00000563219 EEF1DP3Q658K8 133 aa4.84□□□□□ -1.63
SHCBP1-202ENST00000563219 BICRALQ6AI39 1079 aa4.84□□□□□ -1.63
SHCBP1-202ENST00000563219 GIMAP6Q6P9H5 292 aa4.84□□□□□ -1.63
SHCBP1-202ENST00000563219 NLGN1Q8N2Q7 840 aa4.84□□□□□ -1.63
SHCBP1-202ENST00000563219 KRTAP9-3Q9BYQ3 159 aa4.84□□□□□ -1.63
SHCBP1-202ENST00000563219 TBX22Q9Y458 520 aa4.84□□□□□ -1.63
SHCBP1-202ENST00000563219 HCFC2Q9Y5Z7 792 aa4.84□□□□□ -1.63
SHCBP1-202ENST00000563219 C2orf71A6NGG8 1288 aa4.83□□□□□ -1.64
SHCBP1-202ENST00000563219 F8W031 263 aaPredicted RBP4.83□□□□□ -1.64
SHCBP1-202ENST00000563219 STXBP3O00186 592 aa4.83□□□□□ -1.64
SHCBP1-202ENST00000563219 CPP00450 1065 aa4.83□□□□□ -1.64
SHCBP1-202ENST00000563219 FAM153BP0C7A2 387 aa4.83□□□□□ -1.64
SHCBP1-202ENST00000563219 FBLN1P23142 703 aa4.83□□□□□ -1.64
SHCBP1-202ENST00000563219 GRIA2P42262 883 aa4.83□□□□□ -1.64
SHCBP1-202ENST00000563219 PRR5P85299 388 aa4.83□□□□□ -1.64
SHCBP1-202ENST00000563219 SCRN1Q12765 414 aa4.83□□□□□ -1.64
SHCBP1-202ENST00000563219 MAP4K2Q12851 820 aa4.83□□□□□ -1.64
SHCBP1-202ENST00000563219 TESK1Q15569 626 aa4.83□□□□□ -1.64
SHCBP1-202ENST00000563219 DPY19L1Q2PZI1 675 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms