RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 CFAP74Q9C0B2 1584 aa7.03□□□□□ -1.28
SMG1-206ENST00000562668 B8ZZF3 427 aa7.03□□□□□ -1.28
SMG1-206ENST00000562668 CYBBP04839 570 aa7.03□□□□□ -1.28
SMG1-206ENST00000562668 DBHP09172 617 aa7.03□□□□□ -1.28
SMG1-206ENST00000562668 GJA8P48165 433 aa7.03□□□□□ -1.28
SMG1-206ENST00000562668 ZNF200P98182 395 aaPredicted RBP7.03□□□□□ -1.28
SMG1-206ENST00000562668 HDLBPQ00341 1268 aaKnown RBP7.03□□□□□ -1.28
SMG1-206ENST00000562668 PPP2R5DQ14738 602 aa7.03□□□□□ -1.28
SMG1-206ENST00000562668 RCSD1Q6JBY9 416 aa7.03□□□□□ -1.28
SMG1-206ENST00000562668 CNKSR3Q6P9H4 555 aa7.03□□□□□ -1.28
SMG1-206ENST00000562668 FAM129CQ86XR2 697 aa7.03□□□□□ -1.28
SMG1-206ENST00000562668 PDLIM7Q9NR12 457 aa7.03□□□□□ -1.28
SMG1-206ENST00000562668 DIS3Q9Y2L1 958 aaKnown RBP7.03□□□□□ -1.28
SMG1-206ENST00000562668 MTUS2Q5JR59 1369 aa7.03□□□□□ -1.28
SMG1-206ENST00000562668 FANCAO15360 1455 aa7.03□□□□□ -1.28
SMG1-206ENST00000562668 ITSN2Q9NZM3 1697 aa7.03□□□□□ -1.28
SMG1-206ENST00000562668 ABCC1P33527 1531 aa7.02□□□□□ -1.29
SMG1-206ENST00000562668 ARHGEF12Q9NZN5 1544 aa7.02□□□□□ -1.29
SMG1-206ENST00000562668 A0A0G2JLL6 359 aaPredicted RBP7.02□□□□□ -1.29
SMG1-206ENST00000562668 A0A1W2PQH9 124 aa7.02□□□□□ -1.29
SMG1-206ENST00000562668 A0A1W2PQJ5 194 aa7.02□□□□□ -1.29
SMG1-206ENST00000562668 PRRG2O14669 202 aa7.02□□□□□ -1.29
SMG1-206ENST00000562668 TBC1D8O95759 1140 aa7.02□□□□□ -1.29
SMG1-206ENST00000562668 SLC7A5Q01650 507 aa7.02□□□□□ -1.29
SMG1-206ENST00000562668 HEATR6Q6AI08 1181 aaKnown RBP7.02□□□□□ -1.29
SMG1-206ENST00000562668 BICRALQ6AI39 1079 aa7.02□□□□□ -1.29
SMG1-206ENST00000562668 PAQR3Q6TCH7 311 aa7.02□□□□□ -1.29
SMG1-206ENST00000562668 NT5DC4Q86YG4 428 aa7.02□□□□□ -1.29
SMG1-206ENST00000562668 RGS22Q8NE09 1264 aa7.02□□□□□ -1.29
SMG1-206ENST00000562668 C20orf173Q96LM9 149 aa7.02□□□□□ -1.29
SMG1-206ENST00000562668 PCDHB10Q9UN67 800 aa7.02□□□□□ -1.29
SMG1-206ENST00000562668 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.02□□□□□ -1.29
SMG1-206ENST00000562668 AKNAQ7Z591 1439 aa7.01□□□□□ -1.29
SMG1-206ENST00000562668 PHLDB1Q86UU1 1377 aa7.01□□□□□ -1.29
SMG1-206ENST00000562668 STXBP3O00186 592 aa7.01□□□□□ -1.29
SMG1-206ENST00000562668 BUB1BO60566 1050 aaPredicted RBP7.01□□□□□ -1.29
SMG1-206ENST00000562668 EPHX1P07099 455 aa7.01□□□□□ -1.29
SMG1-206ENST00000562668 L1CAMP32004 1257 aa7.01□□□□□ -1.29
SMG1-206ENST00000562668 NCKAP1LP55160 1127 aa7.01□□□□□ -1.29
SMG1-206ENST00000562668 EEF1DP3Q658K8 133 aa7.01□□□□□ -1.29
SMG1-206ENST00000562668 KLHL6Q8WZ60 621 aa7.01□□□□□ -1.29
SMG1-206ENST00000562668 CGGBP1Q9UFW8 167 aaPredicted RBP7.01□□□□□ -1.29
SMG1-206ENST00000562668 ARHGAP5Q13017 1502 aa7.01□□□□□ -1.29
SMG1-206ENST00000562668 IRS2Q9Y4H2 1338 aa7.01□□□□□ -1.29
SMG1-206ENST00000562668 KDM5CP41229 1560 aa7□□□□□ -1.29
SMG1-206ENST00000562668 AURKAO14965 403 aa7□□□□□ -1.29
SMG1-206ENST00000562668 PFKLP17858 780 aa7□□□□□ -1.29
SMG1-206ENST00000562668 IGFBP6P24592 240 aaPredicted RBP7□□□□□ -1.29
SMG1-206ENST00000562668 TACR1P25103 407 aa7□□□□□ -1.29
SMG1-206ENST00000562668 NASPP49321 788 aaPredicted RBP7□□□□□ -1.29
SMG1-206ENST00000562668 SP8Q8IXZ3 490 aa7□□□□□ -1.29
SMG1-206ENST00000562668 MRRFQ96E11 262 aaKnown RBP7□□□□□ -1.29
SMG1-206ENST00000562668 SHDQ96IW2 340 aa7□□□□□ -1.29
SMG1-206ENST00000562668 MCMBPQ9BTE3 642 aa7□□□□□ -1.29
SMG1-206ENST00000562668 ZMYM4Q5VZL5 1548 aa7□□□□□ -1.29
SMG1-206ENST00000562668 ADGRL1O94910 1474 aa6.99□□□□□ -1.29
SMG1-206ENST00000562668 MBD5Q9P267 1494 aa6.99□□□□□ -1.29
SMG1-206ENST00000562668 PPM1BO75688 479 aa6.99□□□□□ -1.29
SMG1-206ENST00000562668 SASH1O94885 1247 aa6.99□□□□□ -1.29
SMG1-206ENST00000562668 FBLN1P23142 703 aa6.99□□□□□ -1.29
SMG1-206ENST00000562668 GRB10Q13322 594 aa6.99□□□□□ -1.29
SMG1-206ENST00000562668 NLGN2Q8NFZ4 835 aa6.99□□□□□ -1.29
SMG1-206ENST00000562668 FGD4Q96M96 766 aa6.99□□□□□ -1.29
SMG1-206ENST00000562668 PWWP2AQ96N64 755 aa6.99□□□□□ -1.29
SMG1-206ENST00000562668 RTEL1Q9NZ71 1219 aa6.99□□□□□ -1.29
SMG1-206ENST00000562668 BACE2Q9Y5Z0 518 aa6.99□□□□□ -1.29
SMG1-206ENST00000562668 HCFC2Q9Y5Z7 792 aa6.99□□□□□ -1.29
SMG1-206ENST00000562668 MYOM3Q5VTT5 1437 aa6.99□□□□□ -1.29
SMG1-206ENST00000562668 POGZQ7Z3K3 1410 aa6.99□□□□□ -1.29
SMG1-206ENST00000562668 SIGLEC1Q9BZZ2 1709 aa6.98□□□□□ -1.29
SMG1-206ENST00000562668 CCNB3Q8WWL7 1395 aa6.98□□□□□ -1.29
SMG1-206ENST00000562668 LIMS1P48059 325 aa6.98□□□□□ -1.29
SMG1-206ENST00000562668 NFIXQ14938 502 aa6.98□□□□□ -1.29
SMG1-206ENST00000562668 TARBP2Q15633 366 aaKnown RBP6.98□□□□□ -1.29
SMG1-206ENST00000562668 VMACQ2NL98 169 aa6.98□□□□□ -1.29
SMG1-206ENST00000562668 DPY19L1Q2PZI1 675 aa6.98□□□□□ -1.29
SMG1-206ENST00000562668 C9orf131Q5VYM1 1079 aa6.98□□□□□ -1.29
SMG1-206ENST00000562668 ADAT2Q7Z6V5 191 aaKnown RBP6.98□□□□□ -1.29
SMG1-206ENST00000562668 RELTQ969Z4 430 aa6.98□□□□□ -1.29
SMG1-206ENST00000562668 XYLT2Q9H1B5 865 aa6.98□□□□□ -1.29
SMG1-206ENST00000562668 SCAPERQ9BY12 1400 aa6.98□□□□□ -1.29
SMG1-206ENST00000562668 DENND4BO75064 1496 aaPredicted RBP6.98□□□□□ -1.29
SMG1-206ENST00000562668 TCOF1Q13428 1488 aaKnown RBP6.98□□□□□ -1.29
SMG1-206ENST00000562668 SYCP2Q9BX26 1530 aa6.97□□□□□ -1.29
SMG1-206ENST00000562668 GLI4P10075 376 aa6.97□□□□□ -1.29
SMG1-206ENST00000562668 BUD31P41223 144 aaPredicted RBP6.97□□□□□ -1.29
SMG1-206ENST00000562668 SEPHS1P49903 392 aa6.97□□□□□ -1.29
SMG1-206ENST00000562668 CASP7P55210 303 aa6.97□□□□□ -1.29
SMG1-206ENST00000562668 AMPD2Q01433 879 aa6.97□□□□□ -1.29
SMG1-206ENST00000562668 PPP2R5EQ16537 467 aa6.97□□□□□ -1.29
SMG1-206ENST00000562668 EFCAB2Q5VUJ9 269 aa6.97□□□□□ -1.29
SMG1-206ENST00000562668 CABP7Q86V35 215 aa6.97□□□□□ -1.29
SMG1-206ENST00000562668 ARHGEF39Q8N4T4 335 aa6.97□□□□□ -1.29
SMG1-206ENST00000562668 LINC01356Q8N9X3 169 aa6.97□□□□□ -1.29
SMG1-206ENST00000562668 RCC1LQ96I51 464 aaKnown RBP6.97□□□□□ -1.29
SMG1-206ENST00000562668 MIA2Q96PC5 1412 aa6.97□□□□□ -1.29
SMG1-206ENST00000562668 KIAA1522Q9P206 1035 aaPredicted RBP6.97□□□□□ -1.29
SMG1-206ENST00000562668 SUSD2Q9UGT4 822 aa6.97□□□□□ -1.29
SMG1-206ENST00000562668 STRIP2Q9ULQ0 834 aa6.97□□□□□ -1.29
SMG1-206ENST00000562668 PLA2G2DQ9UNK4 145 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms