RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 RANBP2P49792 3224 aaKnown RBP4.38□□□□□ -1.71
SPG11-225ENST00000561391 SHTN1A0MZ66 631 aa4.38□□□□□ -1.71
SPG11-225ENST00000561391 ADM5C9JUS6 153 aa4.38□□□□□ -1.71
SPG11-225ENST00000561391 ZNF865P0CJ78 1059 aaPredicted RBP4.38□□□□□ -1.71
SPG11-225ENST00000561391 RLBP1P12271 317 aa4.38□□□□□ -1.71
SPG11-225ENST00000561391 BMP6P22004 513 aa4.38□□□□□ -1.71
SPG11-225ENST00000561391 NME2P22392 152 aa4.38□□□□□ -1.71
SPG11-225ENST00000561391 ERCC5P28715 1186 aaPredicted RBP4.38□□□□□ -1.71
SPG11-225ENST00000561391 TM4SF4P48230 202 aa4.38□□□□□ -1.71
SPG11-225ENST00000561391 GMPSP49915 693 aaPredicted RBP4.38□□□□□ -1.71
SPG11-225ENST00000561391 LIG3P49916 1009 aa4.38□□□□□ -1.71
SPG11-225ENST00000561391 FAM160A1Q05DH4 1040 aa4.38□□□□□ -1.71
SPG11-225ENST00000561391 SOX4Q06945 474 aaPredicted RBP4.38□□□□□ -1.71
SPG11-225ENST00000561391 AP3B2Q13367 1082 aa4.38□□□□□ -1.71
SPG11-225ENST00000561391 RRS1Q15050 365 aaKnown RBP4.38□□□□□ -1.71
SPG11-225ENST00000561391 HSP90AB2PQ58FF8 381 aa4.38□□□□□ -1.71
SPG11-225ENST00000561391 RASIP1Q5U651 963 aa4.38□□□□□ -1.71
SPG11-225ENST00000561391 KRT26Q7Z3Y9 468 aa4.38□□□□□ -1.71
SPG11-225ENST00000561391 NT5DC4Q86YG4 428 aa4.38□□□□□ -1.71
SPG11-225ENST00000561391 IFNL2Q8IZJ0 200 aa4.38□□□□□ -1.71
SPG11-225ENST00000561391 EZH1Q92800 747 aaPredicted RBP4.38□□□□□ -1.71
SPG11-225ENST00000561391 JARID2Q92833 1246 aaPredicted RBP4.38□□□□□ -1.71
SPG11-225ENST00000561391 EMILIN2Q9BXX0 1053 aa4.38□□□□□ -1.71
SPG11-225ENST00000561391 SOX17Q9H6I2 414 aaPredicted RBP4.38□□□□□ -1.71
SPG11-225ENST00000561391 METTL5Q9NRN9 209 aaKnown RBP4.38□□□□□ -1.71
SPG11-225ENST00000561391 RAD18Q9NS91 495 aa4.38□□□□□ -1.71
SPG11-225ENST00000561391 NCANO14594 1321 aa4.38□□□□□ -1.71
SPG11-225ENST00000561391 EVC2Q86UK5 1308 aa4.38□□□□□ -1.71
SPG11-225ENST00000561391 SYNGAP1Q96PV0 1343 aa4.38□□□□□ -1.71
SPG11-225ENST00000561391 IRS2Q9Y4H2 1338 aa4.38□□□□□ -1.71
SPG11-225ENST00000561391 BRCA2P51587 3418 aa4.37□□□□□ -1.71
SPG11-225ENST00000561391 UBE2Q2LH0YL09 131 aa4.37□□□□□ -1.71
SPG11-225ENST00000561391 PRRG2O14669 202 aa4.37□□□□□ -1.71
SPG11-225ENST00000561391 TCERG1O14776 1098 aaKnown RBP4.37□□□□□ -1.71
SPG11-225ENST00000561391 DLGAP3O95886 979 aa4.37□□□□□ -1.71
SPG11-225ENST00000561391 NFICP08651 508 aa4.37□□□□□ -1.71
SPG11-225ENST00000561391 GSTP1P09211 210 aaKnown RBP4.37□□□□□ -1.71
SPG11-225ENST00000561391 ADH5P11766 374 aa4.37□□□□□ -1.71
SPG11-225ENST00000561391 PHKG2P15735 406 aa4.37□□□□□ -1.71
SPG11-225ENST00000561391 CXCL9Q07325 125 aa4.37□□□□□ -1.71
SPG11-225ENST00000561391 LRRC14Q15048 493 aa4.37□□□□□ -1.71
SPG11-225ENST00000561391 SLC9C1Q4G0N8 1177 aa4.37□□□□□ -1.71
SPG11-225ENST00000561391 LLGL2Q6P1M3 1020 aa4.37□□□□□ -1.71
SPG11-225ENST00000561391 MOB2Q70IA6 237 aa4.37□□□□□ -1.71
SPG11-225ENST00000561391 DNAJC10Q8IXB1 793 aa4.37□□□□□ -1.71
SPG11-225ENST00000561391 NIM1KQ8IY84 436 aa4.37□□□□□ -1.71
SPG11-225ENST00000561391 CD99L2Q8TCZ2 262 aa4.37□□□□□ -1.71
SPG11-225ENST00000561391 TMEM40Q8WWA1 233 aa4.37□□□□□ -1.71
SPG11-225ENST00000561391 DCPSQ96C86 337 aaKnown RBP4.37□□□□□ -1.71
SPG11-225ENST00000561391 MISP3Q96FF7 219 aa4.37□□□□□ -1.71
SPG11-225ENST00000561391 ZNF333Q96JL9 665 aa4.37□□□□□ -1.71
SPG11-225ENST00000561391 TMEM74Q96NL1 305 aa4.37□□□□□ -1.71
SPG11-225ENST00000561391 TOX2Q96NM4 488 aa4.37□□□□□ -1.71
SPG11-225ENST00000561391 GUCD1Q96NT3 240 aa4.37□□□□□ -1.71
SPG11-225ENST00000561391 HTATIP2Q9BUP3 242 aa4.37□□□□□ -1.71
SPG11-225ENST00000561391 CNOT7Q9UIV1 285 aaKnown RBP4.37□□□□□ -1.71
SPG11-225ENST00000561391 PCDHB5Q9Y5E4 795 aa4.37□□□□□ -1.71
SPG11-225ENST00000561391 ACTL7BQ9Y614 415 aa4.37□□□□□ -1.71
SPG11-225ENST00000561391 SOS1Q07889 1333 aaPredicted RBP4.37□□□□□ -1.71
SPG11-225ENST00000561391 CENPFP49454 3210 aa4.36□□□□□ -1.71
SPG11-225ENST00000561391 NRXN2Q9P2S2 1712 aa4.36□□□□□ -1.71
SPG11-225ENST00000561391 LRRC10BA6NIK2 292 aa4.36□□□□□ -1.71
SPG11-225ENST00000561391 ERVV-2B6SEH9 535 aa4.36□□□□□ -1.71
SPG11-225ENST00000561391 H7C1D1 291 aa4.36□□□□□ -1.71
SPG11-225ENST00000561391 EIF4EBP3O60516 100 aaPredicted RBP4.36□□□□□ -1.71
SPG11-225ENST00000561391 PF4P02776 101 aa4.36□□□□□ -1.71
SPG11-225ENST00000561391 CTSBP07858 339 aa4.36□□□□□ -1.71
SPG11-225ENST00000561391 NPR1P16066 1061 aa4.36□□□□□ -1.71
SPG11-225ENST00000561391 LIG1P18858 919 aa4.36□□□□□ -1.71
SPG11-225ENST00000561391 TFE3P19532 575 aaPredicted RBP4.36□□□□□ -1.71
SPG11-225ENST00000561391 CANXP27824 592 aaKnown RBP4.36□□□□□ -1.71
SPG11-225ENST00000561391 ST5P78524 1137 aa4.36□□□□□ -1.71
SPG11-225ENST00000561391 PWP1Q13610 501 aa4.36□□□□□ -1.71
SPG11-225ENST00000561391 SEPT6Q14141 434 aa4.36□□□□□ -1.71
SPG11-225ENST00000561391 LILRA6Q6PI73 481 aa4.36□□□□□ -1.71
SPG11-225ENST00000561391 DYMQ7RTS9 669 aa4.36□□□□□ -1.71
SPG11-225ENST00000561391 ERMP1Q7Z2K6 904 aa4.36□□□□□ -1.71
SPG11-225ENST00000561391 SPRED2Q7Z698 418 aa4.36□□□□□ -1.71
SPG11-225ENST00000561391 METTL16Q86W50 562 aaKnown RBP4.36□□□□□ -1.71
SPG11-225ENST00000561391 CNBD1Q8NA66 436 aa4.36□□□□□ -1.71
SPG11-225ENST00000561391 PHC3Q8NDX5 983 aa4.36□□□□□ -1.71
SPG11-225ENST00000561391 ZSCAN18Q8TBC5 510 aaPredicted RBP4.36□□□□□ -1.71
SPG11-225ENST00000561391 GATA6Q92908 595 aa4.36□□□□□ -1.71
SPG11-225ENST00000561391 WDR89Q96FK6 387 aaPredicted RBP4.36□□□□□ -1.71
SPG11-225ENST00000561391 COG3Q96JB2 828 aa4.36□□□□□ -1.71
SPG11-225ENST00000561391 FAM84AQ96KN4 292 aa4.36□□□□□ -1.71
SPG11-225ENST00000561391 P2RX7Q99572 595 aaKnown RBP4.36□□□□□ -1.71
SPG11-225ENST00000561391 RSRP1Q9BUV0 290 aa4.36□□□□□ -1.71
SPG11-225ENST00000561391 MIR1-1HGQ9H1L0 117 aa4.36□□□□□ -1.71
SPG11-225ENST00000561391 SEMA6CQ9H3T2 930 aa4.36□□□□□ -1.71
SPG11-225ENST00000561391 CCDC86Q9H6F5 360 aaKnown RBP4.36□□□□□ -1.71
SPG11-225ENST00000561391 CYP8B1Q9UNU6 501 aa4.36□□□□□ -1.71
SPG11-225ENST00000561391 AP4E1Q9UPM8 1137 aa4.36□□□□□ -1.71
SPG11-225ENST00000561391 ANKRD31Q8N7Z5 1873 aa4.36□□□□□ -1.71
SPG11-225ENST00000561391 CACNA1AO00555 2505 aa4.36□□□□□ -1.71
SPG11-225ENST00000561391 COL5A3P25940 1745 aaPredicted RBP4.35□□□□□ -1.71
SPG11-225ENST00000561391 RBBP6Q7Z6E9 1792 aaKnown RBP4.35□□□□□ -1.71
SPG11-225ENST00000561391 POLR2AP24928 1970 aaKnown RBP4.35□□□□□ -1.71
SPG11-225ENST00000561391 RAD17O75943 681 aa4.35□□□□□ -1.71
SPG11-225ENST00000561391 CYP19A1P11511 503 aaPredicted RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms