RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 CCDC96Q2M329 555 aa21.88■■□□□ 1.09
TPM1-226ENST00000560959 SYDE2Q5VT97 1194 aa21.88■■□□□ 1.09
TPM1-226ENST00000560959 TSHZ3Q63HK5 1081 aa21.88■■□□□ 1.09
TPM1-226ENST00000560959 SESTD1Q86VW0 696 aa21.88■■□□□ 1.09
TPM1-226ENST00000560959 AFAP1L1Q8TED9 768 aa21.88■■□□□ 1.09
TPM1-226ENST00000560959 CLEC4DQ8WXI8 215 aa21.88■■□□□ 1.09
TPM1-226ENST00000560959 MAF1Q9H063 256 aa21.88■■□□□ 1.09
TPM1-226ENST00000560959 PI4K2BG5E9Z4 385 aa21.87■■□□□ 1.09
TPM1-226ENST00000560959 ORC4O43929 436 aa21.87■■□□□ 1.09
TPM1-226ENST00000560959 TTBK2Q6IQ55 1244 aa21.87■■□□□ 1.09
TPM1-226ENST00000560959 RNF207Q6ZRF8 634 aa21.87■■□□□ 1.09
TPM1-226ENST00000560959 NOD1Q9Y239 953 aa21.87■■□□□ 1.09
TPM1-226ENST00000560959 TXNP10599 105 aaKnown RBP21.86■■□□□ 1.09
TPM1-226ENST00000560959 SLC16A2P36021 539 aa21.86■■□□□ 1.09
TPM1-226ENST00000560959 CTDSPL2Q05D32 466 aa21.86■■□□□ 1.09
TPM1-226ENST00000560959 RBL2Q08999 1139 aa21.86■■□□□ 1.09
TPM1-226ENST00000560959 RGS22Q8NE09 1264 aa21.86■■□□□ 1.09
TPM1-226ENST00000560959 TCP11L1Q9NUJ3 509 aa21.86■■□□□ 1.09
TPM1-226ENST00000560959 LCTP09848 1927 aa21.86■■□□□ 1.09
TPM1-226ENST00000560959 FOXP2O15409 715 aa21.85■■□□□ 1.09
TPM1-226ENST00000560959 RANBP6O60518 1105 aaKnown RBP21.85■■□□□ 1.09
TPM1-226ENST00000560959 TOP1P11387 765 aaKnown RBP21.85■■□□□ 1.09
TPM1-226ENST00000560959 CALML3P27482 149 aa21.85■■□□□ 1.09
TPM1-226ENST00000560959 WDR5P61964 334 aaKnown RBP21.85■■□□□ 1.09
TPM1-226ENST00000560959 RPS6P62753 249 aaKnown RBP21.85■■□□□ 1.09
TPM1-226ENST00000560959 PTGISQ16647 500 aa21.85■■□□□ 1.09
TPM1-226ENST00000560959 SLC30A10Q6XR72 485 aa21.85■■□□□ 1.09
TPM1-226ENST00000560959 RASGRP2Q7LDG7 609 aa21.85■■□□□ 1.09
TPM1-226ENST00000560959 C11orf16Q9NQ32 467 aa21.85■■□□□ 1.09
TPM1-226ENST00000560959 INCENPQ9NQS7 918 aa21.85■■□□□ 1.09
TPM1-226ENST00000560959 SCN5AQ14524 2016 aa21.85■■□□□ 1.09
TPM1-226ENST00000560959 WDR19Q8NEZ3 1342 aa21.84■■□□□ 1.09
TPM1-226ENST00000560959 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.84■■□□□ 1.09
TPM1-226ENST00000560959 CXCL10P02778 98 aa21.84■■□□□ 1.09
TPM1-226ENST00000560959 GPNMBQ14956 572 aa21.84■■□□□ 1.09
TPM1-226ENST00000560959 ALX1Q15699 326 aa21.84■■□□□ 1.09
TPM1-226ENST00000560959 CNKSR3Q6P9H4 555 aa21.84■■□□□ 1.09
TPM1-226ENST00000560959 PI4K2BQ8TCG2 481 aa21.84■■□□□ 1.09
TPM1-226ENST00000560959 RAD9AQ99638 391 aa21.84■■□□□ 1.09
TPM1-226ENST00000560959 FSD1Q9BTV5 496 aa21.84■■□□□ 1.09
TPM1-226ENST00000560959 ABHD14A-ACY1A0A1B0GW23 586 aa21.83■■□□□ 1.09
TPM1-226ENST00000560959 EFCAB14O75071 495 aa21.83■■□□□ 1.09
TPM1-226ENST00000560959 SELPP16109 830 aa21.83■■□□□ 1.09
TPM1-226ENST00000560959 COPS5Q92905 334 aa21.83■■□□□ 1.09
TPM1-226ENST00000560959 TMEM47Q9BQJ4 181 aa21.83■■□□□ 1.09
TPM1-226ENST00000560959 ZBED2Q9BTP6 218 aa21.83■■□□□ 1.09
TPM1-226ENST00000560959 MTMR7Q9Y216 660 aa21.83■■□□□ 1.09
TPM1-226ENST00000560959 GJB5O95377 273 aa21.82■■□□□ 1.08
TPM1-226ENST00000560959 ERVK-21P61565 698 aa21.82■■□□□ 1.08
TPM1-226ENST00000560959 CCDC62Q6P9F0 684 aa21.82■■□□□ 1.08
TPM1-226ENST00000560959 KHSRPQ92945 711 aaKnown RBP eCLIP21.82■■□□□ 1.08
TPM1-226ENST00000560959 TTC14Q96N46 770 aa21.82■■□□□ 1.08
TPM1-226ENST00000560959 TGS1Q96RS0 853 aaKnown RBP21.82■■□□□ 1.08
TPM1-226ENST00000560959 CTAGE1Q96RT6 745 aa21.82■■□□□ 1.08
TPM1-226ENST00000560959 SUGCTQ9HAC7 445 aa21.82■■□□□ 1.08
TPM1-226ENST00000560959 LCHNA4D1U4 455 aa21.81■■□□□ 1.08
TPM1-226ENST00000560959 PDHBP11177 359 aa21.81■■□□□ 1.08
TPM1-226ENST00000560959 LRRC8DQ7L1W4 858 aa21.81■■□□□ 1.08
TPM1-226ENST00000560959 GPCPD1Q9NPB8 672 aa21.81■■□□□ 1.08
TPM1-226ENST00000560959 RCAN3Q9UKA8 241 aa21.81■■□□□ 1.08
TPM1-226ENST00000560959 TANC1Q9C0D5 1861 aa21.8■■□□□ 1.08
TPM1-226ENST00000560959 ARIH2O95376 493 aa21.8■■□□□ 1.08
TPM1-226ENST00000560959 CASTP20810 708 aaKnown RBP21.8■■□□□ 1.08
TPM1-226ENST00000560959 LEXMQ3ZCV2 418 aa21.8■■□□□ 1.08
TPM1-226ENST00000560959 GDF6Q6KF10 455 aaPredicted RBP21.8■■□□□ 1.08
TPM1-226ENST00000560959 SPRED2Q7Z698 418 aa21.8■■□□□ 1.08
TPM1-226ENST00000560959 PPP1R13LQ8WUF5 828 aa21.8■■□□□ 1.08
TPM1-226ENST00000560959 UBE2ZQ9H832 354 aaPredicted RBP21.8■■□□□ 1.08
TPM1-226ENST00000560959 CD320Q9NPF0 282 aa21.8■■□□□ 1.08
TPM1-226ENST00000560959 TET1Q8NFU7 2136 aa21.8■■□□□ 1.08
TPM1-226ENST00000560959 FRMPD2Q68DX3 1309 aaPredicted RBP21.8■■□□□ 1.08
TPM1-226ENST00000560959 PRR33A8MZF0 331 aa21.79■■□□□ 1.08
TPM1-226ENST00000560959 GH1P01241 217 aa21.79■■□□□ 1.08
TPM1-226ENST00000560959 MMP3P08254 477 aa21.79■■□□□ 1.08
TPM1-226ENST00000560959 SNHG28P0DPA3 235 aa21.79■■□□□ 1.08
TPM1-226ENST00000560959 ZNF543Q08ER8 600 aa21.79■■□□□ 1.08
TPM1-226ENST00000560959 C20orf194Q5TEA3 1177 aa21.79■■□□□ 1.08
TPM1-226ENST00000560959 FAM178BQ8IXR5 827 aa21.79■■□□□ 1.08
TPM1-226ENST00000560959 GDPD5Q8WTR4 605 aa21.79■■□□□ 1.08
TPM1-226ENST00000560959 AFG1LQ8WV93 481 aa21.79■■□□□ 1.08
TPM1-226ENST00000560959 KAT2BQ92831 832 aa21.79■■□□□ 1.08
TPM1-226ENST00000560959 GTF2IRD1Q9UHL9 959 aa21.79■■□□□ 1.08
TPM1-226ENST00000560959 LINC01553A4QN01 128 aa21.78■■□□□ 1.08
TPM1-226ENST00000560959 NBNO60934 754 aa21.78■■□□□ 1.08
TPM1-226ENST00000560959 CKBP12277 381 aa21.78■■□□□ 1.08
TPM1-226ENST00000560959 DEFB103AP81534 67 aa21.78■■□□□ 1.08
TPM1-226ENST00000560959 IKBKEQ14164 716 aa21.78■■□□□ 1.08
TPM1-226ENST00000560959 GJD3Q8N144 294 aa21.78■■□□□ 1.08
TPM1-226ENST00000560959 DHX38Q92620 1227 aaKnown RBP21.78■■□□□ 1.08
TPM1-226ENST00000560959 IWS1Q96ST2 819 aa21.78■■□□□ 1.08
TPM1-226ENST00000560959 ARHGAP1Q07960 439 aa21.77■■□□□ 1.08
TPM1-226ENST00000560959 DGKDQ16760 1214 aa21.77■■□□□ 1.08
TPM1-226ENST00000560959 PUS10Q3MIT2 529 aaKnown RBP21.77■■□□□ 1.08
TPM1-226ENST00000560959 GPATCH4Q5T3I0 446 aaKnown RBP21.77■■□□□ 1.08
TPM1-226ENST00000560959 TICAM2Q86XR7 235 aa21.77■■□□□ 1.08
TPM1-226ENST00000560959 EMID1Q96A84 441 aaPredicted RBP21.77■■□□□ 1.08
TPM1-226ENST00000560959 KATNAL1Q9BW62 490 aa21.77■■□□□ 1.08
TPM1-226ENST00000560959 HELLSQ9NRZ9 838 aa21.77■■□□□ 1.08
TPM1-226ENST00000560959 FGAP02671 866 aa21.76■■□□□ 1.07
TPM1-226ENST00000560959 PCP11498 1178 aaKnown RBP21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms