RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 FMR1Q06787 632 aaKnown RBP eCLIP6.39□□□□□ -1.39
ZEB1-220ENST00000560909 APOBRQ0VD83 1088 aa6.39□□□□□ -1.39
ZEB1-220ENST00000560909 VGLL4Q14135 290 aa6.39□□□□□ -1.39
ZEB1-220ENST00000560909 NTRK3Q16288 839 aa6.39□□□□□ -1.39
ZEB1-220ENST00000560909 ME3Q16798 604 aa6.39□□□□□ -1.39
ZEB1-220ENST00000560909 IFIT1BQ5T764 474 aaKnown RBP6.39□□□□□ -1.39
ZEB1-220ENST00000560909 DESI1Q6ICB0 168 aa6.39□□□□□ -1.39
ZEB1-220ENST00000560909 BTNL9Q6UXG8 535 aa6.39□□□□□ -1.39
ZEB1-220ENST00000560909 ERO1BQ86YB8 467 aa6.39□□□□□ -1.39
ZEB1-220ENST00000560909 ZNF654Q8IZM8 581 aa6.39□□□□□ -1.39
ZEB1-220ENST00000560909 FANCBQ8NB91 859 aa6.39□□□□□ -1.39
ZEB1-220ENST00000560909 PNMA1Q8ND90 353 aa6.39□□□□□ -1.39
ZEB1-220ENST00000560909 RGS22Q8NE09 1264 aa6.39□□□□□ -1.39
ZEB1-220ENST00000560909 ACER1Q8TDN7 264 aa6.39□□□□□ -1.39
ZEB1-220ENST00000560909 ZNF526Q8TF50 670 aaPredicted RBP6.39□□□□□ -1.39
ZEB1-220ENST00000560909 ZKSCAN4Q969J2 545 aaPredicted RBP6.39□□□□□ -1.39
ZEB1-220ENST00000560909 INTS4Q96HW7 963 aaKnown RBP6.39□□□□□ -1.39
ZEB1-220ENST00000560909 HHIPL1Q96JK4 782 aa6.39□□□□□ -1.39
ZEB1-220ENST00000560909 ZKSCAN3Q9BRR0 538 aa6.39□□□□□ -1.39
ZEB1-220ENST00000560909 CFHR5Q9BXR6 569 aa6.39□□□□□ -1.39
ZEB1-220ENST00000560909 GBA2Q9HCG7 927 aaPredicted RBP6.39□□□□□ -1.39
ZEB1-220ENST00000560909 TOMM22Q9NS69 142 aa6.39□□□□□ -1.39
ZEB1-220ENST00000560909 CLIP2Q9UDT6 1046 aa6.39□□□□□ -1.39
ZEB1-220ENST00000560909 PAPPA2Q9BXP8 1791 aa6.39□□□□□ -1.39
ZEB1-220ENST00000560909 KLF18A0A0U1RQI7 1052 aa6.38□□□□□ -1.39
ZEB1-220ENST00000560909 ERICH2A1L162 156 aa6.38□□□□□ -1.39
ZEB1-220ENST00000560909 C19orf81C9J6K1 198 aa6.38□□□□□ -1.39
ZEB1-220ENST00000560909 F5H6K3 240 aa6.38□□□□□ -1.39
ZEB1-220ENST00000560909 UBE2Q2LH0YL09 131 aa6.38□□□□□ -1.39
ZEB1-220ENST00000560909 ZBTB43O43298 467 aa6.38□□□□□ -1.39
ZEB1-220ENST00000560909 CELF2O95319 508 aaKnown RBP6.38□□□□□ -1.39
ZEB1-220ENST00000560909 LARGE1O95461 756 aa6.38□□□□□ -1.39
ZEB1-220ENST00000560909 NDUFB10O96000 172 aa6.38□□□□□ -1.39
ZEB1-220ENST00000560909 PDHBP11177 359 aa6.38□□□□□ -1.39
ZEB1-220ENST00000560909 BACE1P56817 501 aa6.38□□□□□ -1.39
ZEB1-220ENST00000560909 KLRC3Q07444 240 aa6.38□□□□□ -1.39
ZEB1-220ENST00000560909 PPIL2Q13356 520 aa6.38□□□□□ -1.39
ZEB1-220ENST00000560909 MOGSQ13724 837 aa6.38□□□□□ -1.39
ZEB1-220ENST00000560909 GRM4Q14833 912 aa6.38□□□□□ -1.39
ZEB1-220ENST00000560909 SLC35G1Q2M3R5 365 aa6.38□□□□□ -1.39
ZEB1-220ENST00000560909 KIAA1755Q5JYT7 1200 aa6.38□□□□□ -1.39
ZEB1-220ENST00000560909 MOB2Q70IA6 237 aa6.38□□□□□ -1.39
ZEB1-220ENST00000560909 CATIPQ7Z7H3 387 aa6.38□□□□□ -1.39
ZEB1-220ENST00000560909 SAPCD2Q86UD0 394 aa6.38□□□□□ -1.39
ZEB1-220ENST00000560909 CLEC10AQ8IUN9 316 aa6.38□□□□□ -1.39
ZEB1-220ENST00000560909 C2orf69Q8N8R5 385 aa6.38□□□□□ -1.39
ZEB1-220ENST00000560909 ZNF280CQ8ND82 737 aa6.38□□□□□ -1.39
ZEB1-220ENST00000560909 SMARCC2Q8TAQ2 1214 aa6.38□□□□□ -1.39
ZEB1-220ENST00000560909 DCAF4Q8WV16 495 aa6.38□□□□□ -1.39
ZEB1-220ENST00000560909 LPAR1Q92633 364 aa6.38□□□□□ -1.39
ZEB1-220ENST00000560909 GTF3C6Q969F1 213 aa6.38□□□□□ -1.39
ZEB1-220ENST00000560909 CHMP4CQ96CF2 233 aa6.38□□□□□ -1.39
ZEB1-220ENST00000560909 MTMR8Q96EF0 704 aa6.38□□□□□ -1.39
ZEB1-220ENST00000560909 CLMNQ96JQ2 1002 aa6.38□□□□□ -1.39
ZEB1-220ENST00000560909 LLPHQ9BRT6 129 aaKnown RBP6.38□□□□□ -1.39
ZEB1-220ENST00000560909 NUCKS1Q9H1E3 243 aaKnown RBP6.38□□□□□ -1.39
ZEB1-220ENST00000560909 SH2D4AQ9H788 454 aa6.38□□□□□ -1.39
ZEB1-220ENST00000560909 VCPKMTQ9H867 229 aa6.38□□□□□ -1.39
ZEB1-220ENST00000560909 PICK1Q9NRD5 415 aa6.38□□□□□ -1.39
ZEB1-220ENST00000560909 PCMTD2Q9NV79 361 aa6.38□□□□□ -1.39
ZEB1-220ENST00000560909 FZD1Q9UP38 647 aa6.38□□□□□ -1.39
ZEB1-220ENST00000560909 CSADQ9Y600 493 aa6.38□□□□□ -1.39
ZEB1-220ENST00000560909 SLC12A7Q9Y666 1083 aa6.38□□□□□ -1.39
ZEB1-220ENST00000560909 A0A0G2JLL6 359 aaPredicted RBP6.37□□□□□ -1.39
ZEB1-220ENST00000560909 CCDC196A0A1B0GTZ2 297 aa6.37□□□□□ -1.39
ZEB1-220ENST00000560909 CCDC69A6NI79 296 aa6.37□□□□□ -1.39
ZEB1-220ENST00000560909 USP17L10C9JJH3 530 aa6.37□□□□□ -1.39
ZEB1-220ENST00000560909 MPHOSPH10O00566 681 aaKnown RBP6.37□□□□□ -1.39
ZEB1-220ENST00000560909 CTDNEP1O95476 244 aa6.37□□□□□ -1.39
ZEB1-220ENST00000560909 ZBTB48P10074 688 aaPredicted RBP6.37□□□□□ -1.39
ZEB1-220ENST00000560909 IFNAR1P17181 557 aa6.37□□□□□ -1.39
ZEB1-220ENST00000560909 CDC27P30260 824 aa6.37□□□□□ -1.39
ZEB1-220ENST00000560909 HOXA7P31268 230 aaPredicted RBP6.37□□□□□ -1.39
ZEB1-220ENST00000560909 DDIT3P35638 169 aa6.37□□□□□ -1.39
ZEB1-220ENST00000560909 ECE1P42892 770 aa6.37□□□□□ -1.39
ZEB1-220ENST00000560909 GNAQP50148 359 aa6.37□□□□□ -1.39
ZEB1-220ENST00000560909 USP14P54578 494 aa6.37□□□□□ -1.39
ZEB1-220ENST00000560909 ZNF543Q08ER8 600 aa6.37□□□□□ -1.39
ZEB1-220ENST00000560909 SCRN1Q12765 414 aa6.37□□□□□ -1.39
ZEB1-220ENST00000560909 SPP2Q13103 211 aa6.37□□□□□ -1.39
ZEB1-220ENST00000560909 RAB3GAP1Q15042 981 aa6.37□□□□□ -1.39
ZEB1-220ENST00000560909 GPATCH4Q5T3I0 446 aaKnown RBP6.37□□□□□ -1.39
ZEB1-220ENST00000560909 TMTC3Q6ZXV5 915 aa6.37□□□□□ -1.39
ZEB1-220ENST00000560909 PRRT2Q7Z6L0 340 aaPredicted RBP6.37□□□□□ -1.39
ZEB1-220ENST00000560909 SPIRE2Q8WWL2 714 aa6.37□□□□□ -1.39
ZEB1-220ENST00000560909 LZTS2Q9BRK4 669 aa6.37□□□□□ -1.39
ZEB1-220ENST00000560909 BEGAINQ9BUH8 593 aa6.37□□□□□ -1.39
ZEB1-220ENST00000560909 SPZ1Q9BXG8 430 aa6.37□□□□□ -1.39
ZEB1-220ENST00000560909 RIOX1Q9H6W3 641 aa6.37□□□□□ -1.39
ZEB1-220ENST00000560909 KAT14Q9H8E8 782 aa6.37□□□□□ -1.39
ZEB1-220ENST00000560909 AS3MTQ9HBK9 375 aa6.37□□□□□ -1.39
ZEB1-220ENST00000560909 ARHGEF10LQ9HCE6 1279 aa6.37□□□□□ -1.39
ZEB1-220ENST00000560909 RBM28Q9NW13 759 aaKnown RBP6.37□□□□□ -1.39
ZEB1-220ENST00000560909 MAD2L2Q9UI95 211 aa6.37□□□□□ -1.39
ZEB1-220ENST00000560909 RNF112Q9ULX5 631 aa6.37□□□□□ -1.39
ZEB1-220ENST00000560909 ADAMTS5Q9UNA0 930 aa6.37□□□□□ -1.39
ZEB1-220ENST00000560909 STX8Q9UNK0 236 aa6.37□□□□□ -1.39
ZEB1-220ENST00000560909 ZHX2Q9Y6X8 837 aa6.37□□□□□ -1.39
ZEB1-220ENST00000560909 TMEM88BA6NKF7 163 aa6.36□□□□□ -1.39
ZEB1-220ENST00000560909 GOLGA8BA8MQT2 603 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms