RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 CNNM3Q8NE01 707 aa6.73□□□□□ -1.33
SNRPA1-209ENST00000560307 ANKRD20A12PQ8NF67 263 aa6.73□□□□□ -1.33
SNRPA1-209ENST00000560307 CCDC12Q8WUD4 166 aaPredicted RBP6.73□□□□□ -1.33
SNRPA1-209ENST00000560307 DHX58Q96C10 678 aa6.73□□□□□ -1.33
SNRPA1-209ENST00000560307 PAGR1Q9BTK6 254 aa6.73□□□□□ -1.33
SNRPA1-209ENST00000560307 FSD1Q9BTV5 496 aa6.73□□□□□ -1.33
SNRPA1-209ENST00000560307 NUCKS1Q9H1E3 243 aaKnown RBP6.73□□□□□ -1.33
SNRPA1-209ENST00000560307 HSD3B7Q9H2F3 369 aa6.73□□□□□ -1.33
SNRPA1-209ENST00000560307 ELP3Q9H9T3 547 aa6.73□□□□□ -1.33
SNRPA1-209ENST00000560307 ZFYVE28Q9HCC9 887 aa6.73□□□□□ -1.33
SNRPA1-209ENST00000560307 FAM8A1Q9UBU6 413 aa6.73□□□□□ -1.33
SNRPA1-209ENST00000560307 HOOK1Q9UJC3 728 aaKnown RBP6.73□□□□□ -1.33
SNRPA1-209ENST00000560307 TTF2Q9UNY4 1162 aaKnown RBP6.73□□□□□ -1.33
SNRPA1-209ENST00000560307 HPSEQ9Y251 543 aa6.73□□□□□ -1.33
SNRPA1-209ENST00000560307 AKAP2Q9Y2D5 859 aa6.73□□□□□ -1.33
SNRPA1-209ENST00000560307 FAN1Q9Y2M0 1017 aa6.73□□□□□ -1.33
SNRPA1-209ENST00000560307 DYRK1BQ9Y463 629 aa6.73□□□□□ -1.33
SNRPA1-209ENST00000560307 GJA3Q9Y6H8 435 aa6.73□□□□□ -1.33
SNRPA1-209ENST00000560307 SH3TC1Q8TE82 1336 aa6.73□□□□□ -1.33
SNRPA1-209ENST00000560307 MARF1Q9Y4F3 1742 aaKnown RBP6.73□□□□□ -1.33
SNRPA1-209ENST00000560307 COL22A1Q8NFW1 1626 aaPredicted RBP6.72□□□□□ -1.33
SNRPA1-209ENST00000560307 PIK3C2AO00443 1686 aa6.72□□□□□ -1.33
SNRPA1-209ENST00000560307 ECM29Q5VYK3 1845 aa6.72□□□□□ -1.33
SNRPA1-209ENST00000560307 LOC102724159A0A0B4J2E5 919 aa6.72□□□□□ -1.33
SNRPA1-209ENST00000560307 A0A0D9SFI3 127 aa6.72□□□□□ -1.33
SNRPA1-209ENST00000560307 TARSL2A2RTX5 802 aaKnown RBP6.72□□□□□ -1.33
SNRPA1-209ENST00000560307 SRRM3A6NNA2 597 aaPredicted RBP6.72□□□□□ -1.33
SNRPA1-209ENST00000560307 GIPC1O14908 333 aa6.72□□□□□ -1.33
SNRPA1-209ENST00000560307 SPTLC2O15270 562 aa6.72□□□□□ -1.33
SNRPA1-209ENST00000560307 KIF5CO60282 957 aa6.72□□□□□ -1.33
SNRPA1-209ENST00000560307 ERLIN2O94905 339 aa6.72□□□□□ -1.33
SNRPA1-209ENST00000560307 PRPF6O94906 941 aaKnown RBP6.72□□□□□ -1.33
SNRPA1-209ENST00000560307 ZNF202O95125 648 aa6.72□□□□□ -1.33
SNRPA1-209ENST00000560307 FBLN1P23142 703 aa6.72□□□□□ -1.33
SNRPA1-209ENST00000560307 MAP2K2P36507 400 aa6.72□□□□□ -1.33
SNRPA1-209ENST00000560307 RNF144AP50876 292 aaPredicted RBP6.72□□□□□ -1.33
SNRPA1-209ENST00000560307 NDUFA8P51970 172 aa6.72□□□□□ -1.33
SNRPA1-209ENST00000560307 PWP2Q15269 919 aaKnown RBP6.72□□□□□ -1.33
SNRPA1-209ENST00000560307 TRIP4Q15650 581 aaPredicted RBP6.72□□□□□ -1.33
SNRPA1-209ENST00000560307 CFAP100Q494V2 611 aa6.72□□□□□ -1.33
SNRPA1-209ENST00000560307 SPECC1LQ69YQ0 1117 aa6.72□□□□□ -1.33
SNRPA1-209ENST00000560307 TTLL5Q6EMB2 1281 aa6.72□□□□□ -1.33
SNRPA1-209ENST00000560307 NXPE4Q6UWF7 544 aa6.72□□□□□ -1.33
SNRPA1-209ENST00000560307 BTLAQ7Z6A9 289 aa6.72□□□□□ -1.33
SNRPA1-209ENST00000560307 CERS3Q8IU89 383 aa6.72□□□□□ -1.33
SNRPA1-209ENST00000560307 MICALL1Q8N3F8 863 aa6.72□□□□□ -1.33
SNRPA1-209ENST00000560307 TC2NQ8N9U0 490 aa6.72□□□□□ -1.33
SNRPA1-209ENST00000560307 FAM227BQ96M60 508 aa6.72□□□□□ -1.33
SNRPA1-209ENST00000560307 WDR24Q96S15 920 aa6.72□□□□□ -1.33
SNRPA1-209ENST00000560307 DSCC1Q9BVC3 393 aa6.72□□□□□ -1.33
SNRPA1-209ENST00000560307 WDR17Q8IZU2 1322 aa6.72□□□□□ -1.33
SNRPA1-209ENST00000560307 WDR19Q8NEZ3 1342 aa6.72□□□□□ -1.33
SNRPA1-209ENST00000560307 SIPA1L3O60292 1781 aaPredicted RBP6.72□□□□□ -1.33
SNRPA1-209ENST00000560307 ADAMTS7Q9UKP4 1686 aa6.71□□□□□ -1.33
SNRPA1-209ENST00000560307 SLIT3O75094 1523 aa6.71□□□□□ -1.33
SNRPA1-209ENST00000560307 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.71□□□□□ -1.34
SNRPA1-209ENST00000560307 CTAGE15A4D2H0 777 aa6.71□□□□□ -1.34
SNRPA1-209ENST00000560307 CTAGE9A4FU28 777 aa6.71□□□□□ -1.34
SNRPA1-209ENST00000560307 ZEB2O60315 1214 aa6.71□□□□□ -1.34
SNRPA1-209ENST00000560307 WDHD1O75717 1129 aaPredicted RBP6.71□□□□□ -1.34
SNRPA1-209ENST00000560307 CTDNEP1O95476 244 aa6.71□□□□□ -1.34
SNRPA1-209ENST00000560307 APPP05067 770 aa6.71□□□□□ -1.34
SNRPA1-209ENST00000560307 CTAGE8P0CG41 777 aa6.71□□□□□ -1.34
SNRPA1-209ENST00000560307 EPB42P16452 691 aa6.71□□□□□ -1.34
SNRPA1-209ENST00000560307 ZNF18P17022 549 aa6.71□□□□□ -1.34
SNRPA1-209ENST00000560307 ATP5JP18859 108 aa6.71□□□□□ -1.34
SNRPA1-209ENST00000560307 INPP5BP32019 993 aa6.71□□□□□ -1.34
SNRPA1-209ENST00000560307 EXOSC10Q01780 885 aaKnown RBP6.71□□□□□ -1.34
SNRPA1-209ENST00000560307 SATB1Q01826 763 aa6.71□□□□□ -1.34
SNRPA1-209ENST00000560307 STK3Q13188 491 aa6.71□□□□□ -1.34
SNRPA1-209ENST00000560307 PLCB4Q15147 1175 aa6.71□□□□□ -1.34
SNRPA1-209ENST00000560307 IER5Q5VY09 327 aa6.71□□□□□ -1.34
SNRPA1-209ENST00000560307 PDE12Q6L8Q7 609 aaKnown RBP6.71□□□□□ -1.34
SNRPA1-209ENST00000560307 RASGRP2Q7LDG7 609 aa6.71□□□□□ -1.34
SNRPA1-209ENST00000560307 UBE3BQ7Z3V4 1068 aa6.71□□□□□ -1.34
SNRPA1-209ENST00000560307 CTAGE6Q86UF2 777 aa6.71□□□□□ -1.34
SNRPA1-209ENST00000560307 AACSQ86V21 672 aa6.71□□□□□ -1.34
SNRPA1-209ENST00000560307 CTAGE4Q8IX94 777 aa6.71□□□□□ -1.34
SNRPA1-209ENST00000560307 AMOTL1Q8IY63 956 aa6.71□□□□□ -1.34
SNRPA1-209ENST00000560307 MLKLQ8NB16 471 aa6.71□□□□□ -1.34
SNRPA1-209ENST00000560307 ENOX1Q8TC92 643 aaKnown RBP6.71□□□□□ -1.34
SNRPA1-209ENST00000560307 CEP63Q96MT8 703 aa6.71□□□□□ -1.34
SNRPA1-209ENST00000560307 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.71□□□□□ -1.342e-8■□□□□ 8.3
SNRPA1-209ENST00000560307 BCO2Q9BYV7 579 aa6.71□□□□□ -1.34
SNRPA1-209ENST00000560307 FAM204AQ9H8W3 233 aa6.71□□□□□ -1.34
SNRPA1-209ENST00000560307 ABCB6Q9NP58 842 aa6.71□□□□□ -1.34
SNRPA1-209ENST00000560307 TPSG1Q9NRR2 321 aa6.71□□□□□ -1.34
SNRPA1-209ENST00000560307 DMGDHQ9UI17 866 aaKnown RBP6.71□□□□□ -1.34
SNRPA1-209ENST00000560307 GGA2Q9UJY4 613 aa6.71□□□□□ -1.34
SNRPA1-209ENST00000560307 ITIH6Q6UXX5 1313 aa6.71□□□□□ -1.34
SNRPA1-209ENST00000560307 DIP2BQ9P265 1576 aa6.7□□□□□ -1.34
SNRPA1-209ENST00000560307 ZNF609O15014 1411 aa6.7□□□□□ -1.34
SNRPA1-209ENST00000560307 A0A1B0GVL5 298 aa6.7□□□□□ -1.34
SNRPA1-209ENST00000560307 SHTN1A0MZ66 631 aa6.7□□□□□ -1.34
SNRPA1-209ENST00000560307 AKR1B15C9JRZ8 316 aaPredicted RBP6.7□□□□□ -1.34
SNRPA1-209ENST00000560307 GOLGA8KD6RF30 607 aa6.7□□□□□ -1.34
SNRPA1-209ENST00000560307 EBAG9O00559 213 aa6.7□□□□□ -1.34
SNRPA1-209ENST00000560307 STK10O94804 968 aaKnown RBP6.7□□□□□ -1.34
SNRPA1-209ENST00000560307 FSBPO95073 299 aa6.7□□□□□ -1.34
SNRPA1-209ENST00000560307 NBPF7P0C2Y1 421 aaPredicted RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms