RNA–Protein interactions for RNA: ENST00000559971.5

APH1B-207, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 1 (best)

Gene APH1B, Length 1,455 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-207ENST00000559971 TTC26A0AVF1 554 aa18.17■□□□□ 0.5
APH1B-207ENST00000559971 PES1O00541 588 aaKnown RBP18.17■□□□□ 0.5
APH1B-207ENST00000559971 KRT86O43790 486 aa18.17■□□□□ 0.5
APH1B-207ENST00000559971 ERLIN1O75477 346 aa18.17■□□□□ 0.5
APH1B-207ENST00000559971 RXRBP28702 533 aa18.17■□□□□ 0.5
APH1B-207ENST00000559971 CHMP4BP1P59074 171 aa18.17■□□□□ 0.5
APH1B-207ENST00000559971 ERVK-24P63145 666 aa18.17■□□□□ 0.5
APH1B-207ENST00000559971 GRB10Q13322 594 aa18.17■□□□□ 0.5
APH1B-207ENST00000559971 AP3B2Q13367 1082 aa18.17■□□□□ 0.5
APH1B-207ENST00000559971 POTEDQ86YR6 584 aa18.17■□□□□ 0.5
APH1B-207ENST00000559971 RPGRIP1Q96KN7 1286 aa18.17■□□□□ 0.5
APH1B-207ENST00000559971 CNOT6LQ96LI5 555 aaKnown RBP18.17■□□□□ 0.5
APH1B-207ENST00000559971 NOC4LQ9BVI4 516 aaKnown RBP18.17■□□□□ 0.5
APH1B-207ENST00000559971 KANSL2Q9H9L4 492 aa18.17■□□□□ 0.5
APH1B-207ENST00000559971 ARFGAP3Q9NP61 516 aa18.17■□□□□ 0.5
APH1B-207ENST00000559971 RGS17Q9UGC6 210 aaPredicted RBP18.17■□□□□ 0.5
APH1B-207ENST00000559971 MAPK8IP1Q9UQF2 711 aa18.17■□□□□ 0.5
APH1B-207ENST00000559971 CCDC151A5D8V7 595 aa18.16■□□□□ 0.5
APH1B-207ENST00000559971 MARCH6O60337 910 aa18.16■□□□□ 0.5
APH1B-207ENST00000559971 ZRANB2O95218 330 aaKnown RBP eCLIP18.16■□□□□ 0.5
APH1B-207ENST00000559971 ZSCAN20P17040 1043 aaPredicted RBP18.16■□□□□ 0.5
APH1B-207ENST00000559971 TRIM21P19474 475 aaKnown RBP18.16■□□□□ 0.5
APH1B-207ENST00000559971 MCM3P25205 808 aa18.16■□□□□ 0.5
APH1B-207ENST00000559971 SHMT1P34896 483 aa18.16■□□□□ 0.5
APH1B-207ENST00000559971 CCDC96Q2M329 555 aa18.16■□□□□ 0.5
APH1B-207ENST00000559971 CDC42EP5Q6NZY7 148 aa18.16■□□□□ 0.5
APH1B-207ENST00000559971 TRIM34Q9BYJ4 488 aa18.16■□□□□ 0.5
APH1B-207ENST00000559971 NUCKS1Q9H1E3 243 aaKnown RBP18.16■□□□□ 0.5
APH1B-207ENST00000559971 GPCPD1Q9NPB8 672 aa18.16■□□□□ 0.5
APH1B-207ENST00000559971 FRMPD2Q68DX3 1309 aaPredicted RBP18.16■□□□□ 0.5
APH1B-207ENST00000559971 TRIM49BA6NDI0 452 aa18.15■□□□□ 0.5
APH1B-207ENST00000559971 EIF3CLB5ME19 914 aaKnown RBP18.15■□□□□ 0.5
APH1B-207ENST00000559971 RIMBP2O15034 1052 aa18.15■□□□□ 0.5
APH1B-207ENST00000559971 PLSCR1O15162 318 aa18.15■□□□□ 0.5
APH1B-207ENST00000559971 GNA14O95837 355 aa18.15■□□□□ 0.5
APH1B-207ENST00000559971 STRIP1Q5VSL9 837 aa18.15■□□□□ 0.5
APH1B-207ENST00000559971 ANKRD40Q6AI12 368 aa18.15■□□□□ 0.5
APH1B-207ENST00000559971 SLFN12Q8IYM2 578 aa18.15■□□□□ 0.5
APH1B-207ENST00000559971 LRRC47Q8N1G4 583 aaKnown RBP18.15■□□□□ 0.5
APH1B-207ENST00000559971 MSL3Q8N5Y2 521 aaKnown RBP18.15■□□□□ 0.5
APH1B-207ENST00000559971 SNX29Q8TEQ0 813 aa18.15■□□□□ 0.5
APH1B-207ENST00000559971 HNRNPLLQ8WVV9 542 aaKnown RBP18.15■□□□□ 0.5
APH1B-207ENST00000559971 COA7Q96BR5 231 aa18.15■□□□□ 0.5
APH1B-207ENST00000559971 PLIN2Q99541 437 aa18.15■□□□□ 0.5
APH1B-207ENST00000559971 EIF3CQ99613 913 aaKnown RBP18.15■□□□□ 0.5
APH1B-207ENST00000559971 IDI2Q9BXS1 227 aa18.15■□□□□ 0.5
APH1B-207ENST00000559971 PSTPIP2Q9H939 334 aa18.15■□□□□ 0.5
APH1B-207ENST00000559971 PI4KBQ9UBF8 816 aa18.15■□□□□ 0.5
APH1B-207ENST00000559971 DDX25Q9UHL0 483 aaKnown RBP18.15■□□□□ 0.5
APH1B-207ENST00000559971 NRXN2Q9P2S2 1712 aa18.15■□□□□ 0.5
APH1B-207ENST00000559971 CYP3A7-CYP3A51PA0A087WV96 503 aa18.14■□□□□ 0.5
APH1B-207ENST00000559971 PSMD14O00487 310 aa18.14■□□□□ 0.5
APH1B-207ENST00000559971 FANCGO15287 622 aa18.14■□□□□ 0.5
APH1B-207ENST00000559971 FOSP01100 380 aaPredicted RBP18.14■□□□□ 0.5
APH1B-207ENST00000559971 CYP3A7P24462 503 aa18.14■□□□□ 0.5
APH1B-207ENST00000559971 HNRNPH3P31942 346 aaKnown RBP18.14■□□□□ 0.5
APH1B-207ENST00000559971 PMS1P54277 932 aaKnown RBP18.14■□□□□ 0.5
APH1B-207ENST00000559971 STK4Q13043 487 aa18.14■□□□□ 0.5
APH1B-207ENST00000559971 MAN2A1Q16706 1144 aa18.14■□□□□ 0.5
APH1B-207ENST00000559971 TEX35Q5T0J7 233 aa18.14■□□□□ 0.5
APH1B-207ENST00000559971 TTYH3Q9C0H2 523 aa18.14■□□□□ 0.5
APH1B-207ENST00000559971 BLOC1S4Q9NUP1 217 aa18.14■□□□□ 0.5
APH1B-207ENST00000559971 CTAGE15A4D2H0 777 aa18.14■□□□□ 0.49
APH1B-207ENST00000559971 TBX3O15119 743 aa18.14■□□□□ 0.49
APH1B-207ENST00000559971 CTAGE8P0CG41 777 aa18.14■□□□□ 0.49
APH1B-207ENST00000559971 PNMA6AP0CW24 399 aaPredicted RBP18.14■□□□□ 0.49
APH1B-207ENST00000559971 ARHGAP25P42331 645 aa18.14■□□□□ 0.49
APH1B-207ENST00000559971 CRKP46108 304 aa18.14■□□□□ 0.49
APH1B-207ENST00000559971 TNNI2P48788 182 aa18.14■□□□□ 0.49
APH1B-207ENST00000559971 STYK1Q6J9G0 422 aa18.14■□□□□ 0.49
APH1B-207ENST00000559971 APOBEC3HQ6NTF7 200 aaKnown RBP18.14■□□□□ 0.49
APH1B-207ENST00000559971 CTAGE6Q86UF2 777 aa18.14■□□□□ 0.49
APH1B-207ENST00000559971 CTAGE4Q8IX94 777 aa18.14■□□□□ 0.49
APH1B-207ENST00000559971 SLC35F6Q8N357 371 aa18.14■□□□□ 0.49
APH1B-207ENST00000559971 CERS5Q8N5B7 392 aa18.14■□□□□ 0.49
APH1B-207ENST00000559971 PNMA5Q96PV4 448 aa18.14■□□□□ 0.49
APH1B-207ENST00000559971 CPVLQ9H3G5 476 aa18.14■□□□□ 0.49
APH1B-207ENST00000559971 DDX4Q9NQI0 724 aaKnown RBP18.14■□□□□ 0.49
APH1B-207ENST00000559971 TMEM260Q9NX78 707 aa18.14■□□□□ 0.49
APH1B-207ENST00000559971 PCDHA12Q9UN75 941 aa18.14■□□□□ 0.49
APH1B-207ENST00000559971 ATF5Q9Y2D1 282 aaPredicted RBP18.14■□□□□ 0.49
APH1B-207ENST00000559971 ANO9A1A5B4 782 aa18.13■□□□□ 0.49
APH1B-207ENST00000559971 MYMKA6NI61 221 aa18.13■□□□□ 0.49
APH1B-207ENST00000559971 B4DLN1 442 aa18.13■□□□□ 0.49
APH1B-207ENST00000559971 MPHOSPH10O00566 681 aaKnown RBP18.13■□□□□ 0.49
APH1B-207ENST00000559971 USO1O60763 962 aaKnown RBP18.13■□□□□ 0.49
APH1B-207ENST00000559971 CKAP4Q07065 602 aaKnown RBP18.13■□□□□ 0.49
APH1B-207ENST00000559971 GPS2Q13227 327 aa18.13■□□□□ 0.49
APH1B-207ENST00000559971 VWA3BQ502W6 1294 aa18.13■□□□□ 0.49
APH1B-207ENST00000559971 CCDC65Q8IXS2 484 aa18.13■□□□□ 0.49
APH1B-207ENST00000559971 MSANTD4Q8NCY6 345 aa18.13■□□□□ 0.49
APH1B-207ENST00000559971 ACRBPQ8NEB7 543 aa18.13■□□□□ 0.49
APH1B-207ENST00000559971 ERMNQ8TAM6 284 aa18.13■□□□□ 0.49
APH1B-207ENST00000559971 PCMTD1Q96MG8 357 aaPredicted RBP18.13■□□□□ 0.49
APH1B-207ENST00000559971 CEP63Q96MT8 703 aa18.13■□□□□ 0.49
APH1B-207ENST00000559971 SLF1Q9BQI6 1058 aa18.13■□□□□ 0.49
APH1B-207ENST00000559971 FHOD1Q9Y613 1164 aa18.13■□□□□ 0.49
APH1B-207ENST00000559971 MCM6Q14566 821 aa18.12■□□□□ 0.49
APH1B-207ENST00000559971 SPA17Q15506 151 aa18.12■□□□□ 0.49
APH1B-207ENST00000559971 HAUS3Q68CZ6 603 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms