RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 FCHSD1Q86WN1 690 aa17.17■□□□□ 0.34
RABGGTA-211ENST00000559850 COPS5Q92905 334 aa17.17■□□□□ 0.34
RABGGTA-211ENST00000559850 BRF1Q92994 677 aa17.17■□□□□ 0.34
RABGGTA-211ENST00000559850 LZTS2Q9BRK4 669 aa17.17■□□□□ 0.34
RABGGTA-211ENST00000559850 WDR11Q9BZH6 1224 aa17.17■□□□□ 0.34
RABGGTA-211ENST00000559850 SEC63Q9UGP8 760 aaKnown RBP17.17■□□□□ 0.34
RABGGTA-211ENST00000559850 MYH7BA7E2Y1 1941 aa17.17■□□□□ 0.34
RABGGTA-211ENST00000559850 LTBP2Q14767 1821 aa17.17■□□□□ 0.34
RABGGTA-211ENST00000559850 CDC27P30260 824 aa17.16■□□□□ 0.34
RABGGTA-211ENST00000559850 SEPT14Q6ZU15 432 aa17.16■□□□□ 0.34
RABGGTA-211ENST00000559850 IL31RAQ8NI17 732 aa17.16■□□□□ 0.34
RABGGTA-211ENST00000559850 NSUN6Q8TEA1 469 aaKnown RBP17.16■□□□□ 0.34
RABGGTA-211ENST00000559850 GPKOWQ92917 476 aaPredicted RBP eCLIP17.16■□□□□ 0.34
RABGGTA-211ENST00000559850 MPHOSPH6Q99547 160 aaKnown RBP17.16■□□□□ 0.34
RABGGTA-211ENST00000559850 AP5M1Q9H0R1 490 aa17.16■□□□□ 0.34
RABGGTA-211ENST00000559850 SPC25Q9HBM1 224 aa17.16■□□□□ 0.34
RABGGTA-211ENST00000559850 PXMP2Q9NR77 195 aa17.16■□□□□ 0.34
RABGGTA-211ENST00000559850 CNTNAP5Q8WYK1 1306 aa17.16■□□□□ 0.34
RABGGTA-211ENST00000559850 LOC102724159A0A0B4J2E5 919 aa17.15■□□□□ 0.34
RABGGTA-211ENST00000559850 RBM47A0AV96 593 aaKnown RBP17.15■□□□□ 0.34
RABGGTA-211ENST00000559850 GCOM1H8Y6P7 765 aaPredicted RBP17.15■□□□□ 0.34
RABGGTA-211ENST00000559850 ARIH2O95376 493 aa17.15■□□□□ 0.34
RABGGTA-211ENST00000559850 ASGR1P07306 291 aa17.15■□□□□ 0.34
RABGGTA-211ENST00000559850 POLR2MP0CAP2 368 aa17.15■□□□□ 0.34
RABGGTA-211ENST00000559850 MYCLP12524 364 aaPredicted RBP17.15■□□□□ 0.34
RABGGTA-211ENST00000559850 SMARCA1P28370 1054 aa17.15■□□□□ 0.34
RABGGTA-211ENST00000559850 GHRHRQ02643 423 aa17.15■□□□□ 0.34
RABGGTA-211ENST00000559850 PWP2Q15269 919 aaKnown RBP17.15■□□□□ 0.34
RABGGTA-211ENST00000559850 LARP6Q9BRS8 491 aaKnown RBP17.15■□□□□ 0.34
RABGGTA-211ENST00000559850 FAM217BQ9NTX9 383 aaPredicted RBP17.15■□□□□ 0.34
RABGGTA-211ENST00000559850 DOCK5Q9H7D0 1870 aa17.15■□□□□ 0.34
RABGGTA-211ENST00000559850 CST5P28325 142 aaPredicted RBP17.14■□□□□ 0.33
RABGGTA-211ENST00000559850 SNX17Q15036 470 aa17.14■□□□□ 0.33
RABGGTA-211ENST00000559850 FSCN1Q16658 493 aaKnown RBP17.14■□□□□ 0.33
RABGGTA-211ENST00000559850 DUSP28Q4G0W2 176 aa17.14■□□□□ 0.33
RABGGTA-211ENST00000559850 USP17L6PQ6QN14 398 aa17.14■□□□□ 0.33
RABGGTA-211ENST00000559850 CXCL17Q6UXB2 119 aa17.14■□□□□ 0.33
RABGGTA-211ENST00000559850 OR6J1Q8NGC5 347 aa17.14■□□□□ 0.33
RABGGTA-211ENST00000559850 VTI1AQ96AJ9 217 aa17.14■□□□□ 0.33
RABGGTA-211ENST00000559850 TSEN34Q9BSV6 310 aaKnown RBP17.14■□□□□ 0.33
RABGGTA-211ENST00000559850 UPF3BQ9BZI7 483 aaKnown RBP17.14■□□□□ 0.33
RABGGTA-211ENST00000559850 PRDM5Q9NQX1 630 aaPredicted RBP17.14■□□□□ 0.33
RABGGTA-211ENST00000559850 STARD7Q9NQZ5 370 aa17.14■□□□□ 0.33
RABGGTA-211ENST00000559850 DNAH12Q6ZR08 3092 aa17.14■□□□□ 0.33
RABGGTA-211ENST00000559850 MOXD2PA6NHM9 499 aa17.13■□□□□ 0.33
RABGGTA-211ENST00000559850 B4DLN1 442 aa17.13■□□□□ 0.33
RABGGTA-211ENST00000559850 PQBP1O60828 265 aaKnown RBP17.13■□□□□ 0.33
RABGGTA-211ENST00000559850 SEC24BO95487 1268 aa17.13■□□□□ 0.33
RABGGTA-211ENST00000559850 NR3C2P08235 984 aa17.13■□□□□ 0.33
RABGGTA-211ENST00000559850 TXNP10599 105 aaKnown RBP17.13■□□□□ 0.33
RABGGTA-211ENST00000559850 PSMA5P28066 241 aa17.13■□□□□ 0.33
RABGGTA-211ENST00000559850 ADD1P35611 737 aaKnown RBP17.13■□□□□ 0.33
RABGGTA-211ENST00000559850 MRPL12P52815 198 aaKnown RBP17.13■□□□□ 0.33
RABGGTA-211ENST00000559850 TLE2Q04725 743 aa17.13■□□□□ 0.33
RABGGTA-211ENST00000559850 FUT2Q10981 343 aa17.13■□□□□ 0.33
RABGGTA-211ENST00000559850 TRAF1Q13077 416 aa17.13■□□□□ 0.33
RABGGTA-211ENST00000559850 PGM5Q15124 567 aa17.13■□□□□ 0.33
RABGGTA-211ENST00000559850 PPP2R5BQ15173 497 aa17.13■□□□□ 0.33
RABGGTA-211ENST00000559850 HEATR3Q7Z4Q2 680 aa17.13■□□□□ 0.33
RABGGTA-211ENST00000559850 SH3RF1Q7Z6J0 888 aa17.13■□□□□ 0.33
RABGGTA-211ENST00000559850 PCSK9Q8NBP7 692 aaKnown RBP17.13■□□□□ 0.33
RABGGTA-211ENST00000559850 PDCD2LQ9BRP1 358 aa17.13■□□□□ 0.33
RABGGTA-211ENST00000559850 MAF1Q9H063 256 aa17.13■□□□□ 0.33
RABGGTA-211ENST00000559850 RBM28Q9NW13 759 aaKnown RBP17.13■□□□□ 0.33
RABGGTA-211ENST00000559850 RBM27Q9P2N5 1060 aaKnown RBP17.13■□□□□ 0.33
RABGGTA-211ENST00000559850 SORBS3O60504 671 aa17.12■□□□□ 0.33
RABGGTA-211ENST00000559850 PPFIA3O75145 1194 aa17.12■□□□□ 0.33
RABGGTA-211ENST00000559850 METAP2P50579 478 aaKnown RBP eCLIP17.12■□□□□ 0.33
RABGGTA-211ENST00000559850 PSMC6P62333 389 aa17.12■□□□□ 0.33
RABGGTA-211ENST00000559850 NKX3-2P78367 333 aa17.12■□□□□ 0.33
RABGGTA-211ENST00000559850 MDM2Q00987 491 aaPredicted RBP17.12■□□□□ 0.33
RABGGTA-211ENST00000559850 STXBP2Q15833 593 aa17.12■□□□□ 0.33
RABGGTA-211ENST00000559850 UBE2SQ16763 222 aa17.12■□□□□ 0.33
RABGGTA-211ENST00000559850 LY6KQ17RY6 165 aa17.12■□□□□ 0.33
RABGGTA-211ENST00000559850 RUFY3Q7L099 469 aa17.12■□□□□ 0.33
RABGGTA-211ENST00000559850 SMARCC2Q8TAQ2 1214 aa17.12■□□□□ 0.33
RABGGTA-211ENST00000559850 SCFD2Q8WU76 684 aa17.12■□□□□ 0.33
RABGGTA-211ENST00000559850 PPP1R13LQ8WUF5 828 aa17.12■□□□□ 0.33
RABGGTA-211ENST00000559850 GLT1D1Q96MS3 346 aa17.12■□□□□ 0.33
RABGGTA-211ENST00000559850 IWS1Q96ST2 819 aa17.12■□□□□ 0.33
RABGGTA-211ENST00000559850 ZSWIM6Q9HCJ5 1215 aa17.12■□□□□ 0.33
RABGGTA-211ENST00000559850 V9GY48 417 aaPredicted RBP17.12■□□□□ 0.33
RABGGTA-211ENST00000559850 EPB41L2O43491 1005 aaKnown RBP17.11■□□□□ 0.33
RABGGTA-211ENST00000559850 MYL3P08590 195 aa17.11■□□□□ 0.33
RABGGTA-211ENST00000559850 MAGEA10P43363 369 aaPredicted RBP17.11■□□□□ 0.33
RABGGTA-211ENST00000559850 TOB2Q14106 344 aaPredicted RBP17.11■□□□□ 0.33
RABGGTA-211ENST00000559850 TTLL4Q14679 1199 aa17.11■□□□□ 0.33
RABGGTA-211ENST00000559850 WWC2Q6AWC2 1192 aa17.11■□□□□ 0.33
RABGGTA-211ENST00000559850 TYW1BQ6NUM6 668 aa17.11■□□□□ 0.33
RABGGTA-211ENST00000559850 MAP3K20Q9NYL2 800 aaKnown RBP17.11■□□□□ 0.33
RABGGTA-211ENST00000559850 CYP46A1Q9Y6A2 500 aa17.11■□□□□ 0.33
RABGGTA-211ENST00000559850 MEIS2O14770 477 aa17.1■□□□□ 0.33
RABGGTA-211ENST00000559850 EIF3JO75822 258 aaKnown RBP17.1■□□□□ 0.33
RABGGTA-211ENST00000559850 RGS20O76081 388 aa17.1■□□□□ 0.33
RABGGTA-211ENST00000559850 CCT2P78371 535 aaKnown RBP17.1■□□□□ 0.33
RABGGTA-211ENST00000559850 HABP4Q5JVS0 413 aaKnown RBP17.1■□□□□ 0.33
RABGGTA-211ENST00000559850 CCDC62Q6P9F0 684 aa17.1■□□□□ 0.33
RABGGTA-211ENST00000559850 AGXT2Q9BYV1 514 aa17.1■□□□□ 0.33
RABGGTA-211ENST00000559850 PRO3102Q9H379 93 aa17.1■□□□□ 0.33
RABGGTA-211ENST00000559850 NCOA5Q9HCD5 579 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms